Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g1328 ATGATGGTGGAGTTCCATGGAGAAATCCGAGACCCCAACGATGGTGAAGACCAAGAACATCAAGAACAAGAAGAGGAAATTAGCTACGATGATCTCAAGAAACGAATGTGGAAAGATCGACAAAGGTTGAAGAAGATGAAGGAGAAGCGTGATGATGAAGAGCCTGAATCCGCCGCTAGAGAAGAAGCCTCTCGCCGTAAGAAAATGGCTAGAGCTCAAGATTCAATCCTCAAGTATATGGATAAGATCATGGAAGCTTGTAAGGCACAAGGGTTTGTTTATGGCATCGTCCCCGAAAAGGGTAAGCCCGTCACCGGCTCCTCCGAGAGCCTCCGTGAGTGGTGGCGGAATGACGTCCGATTCGAACAAGATGCTCCCATGGCCATAGCAAAATTCCTCCCCAAAGTAATCGAAGAATCAGGGCTCGATCCCAATTCGTTTTTGCACCTACTCACCGATTTACAGGACACAACATTAGGCTCCATTCTCTCTGCTCTGATGCAGCACTGTATTCCCCCGCAGAGGAAATTCCCACTGGAGAAGGGTTTAGCGCCGCCGTGGTGGCCGACGGGTAACGAGCTTTGGTGGGGAGAACAGGGTCCCGCCGGTGGGCATGGTGTTCCGCCGTACAAAAAGCCCCACGACCTCAAAAAGGCTTGGAAAATCAGTGTCCTGGCGGCGGTGATCAAACACATGTCCCCTGATATGGACAACATGAGGAAATTAGTTCGGCAATCGAAGAATTTACAAGCAAAAATGACGGCAAAAGAGACGCTTACTTGGGCTAAGGTAGTGAATCAAGAAGAAGCCCTGTCACAATTAACCAAAAAAAAACTCAAAATCACACCCGACGTAGAAGAAGAAGAAGAAGAAGAAAAAGAACACGAGAAAAACAGAGGCGAACAGGGCACGGATGGAATTATGGAGAAACGAAAGTGCATATTCGAAGAAGAAGCTGTAGCCGATTCGACACTGTACCCTTGCCAGAATCAATGGTGCCCACAGAGCGAGGTGCTGATGGGATTCATGGACAAGAACGCAAGAACAGAGCATGAGACGCAGTGCATGTACAGAGGCGGGCAGACGGCGGAACAAGAACAATTCTCAGAGGAGCAGTCGATCGACACGCATTTGAAGAGCGTGGTGGATTGGATGAACTGGGAGTTATCAAGAGCAGAGCCGGGCAGCGACGAGGCAATGATCGAAGATGCCGGAGACGGGTCGGGCAGCAGCACGGTGGAGGATTACTGGAATGGCGGCGCGGTGGAGGAGGCGTTTGAGATGCAGAGAAGGAGTATGGATTTGAATGCGAGTCCGGCGGAGGATTTGGGCGCCCAACAAGATGCCACTTCCATTTGGGATTTGAGATACGAATGGGCTGAGGAATGA 1389 50.25 MMVEFHGEIRDPNDGEDQEHQEQEEEISYDDLKKRMWKDRQRLKKMKEKRDDEEPESAAREEASRRKKMARAQDSILKYMDKIMEACKAQGFVYGIVPEKGKPVTGSSESLREWWRNDVRFEQDAPMAIAKFLPKVIEESGLDPNSFLHLLTDLQDTTLGSILSALMQHCIPPQRKFPLEKGLAPPWWPTGNELWWGEQGPAGGHGVPPYKKPHDLKKAWKISVLAAVIKHMSPDMDNMRKLVRQSKNLQAKMTAKETLTWAKVVNQEEALSQLTKKKLKITPDVEEEEEEEKEHEKNRGEQGTDGIMEKRKCIFEEEAVADSTLYPCQNQWCPQSEVLMGFMDKNARTEHETQCMYRGGQTAEQEQFSEEQSIDTHLKSVVDWMNWELSRAEPGSDEAMIEDAGDGSGSSTVEDYWNGGAVEEAFEMQRRSMDLNASPAEDLGAQQDATSIWDLRYEWAEE 462
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 28038929 28040317 + CrPI670011_07g013280.1 Cre07g1328 503909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g1328 462 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 15 385 IPR006957 GO:0003677(PANTHER)|GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(InterPro)
Cre07g1328 462 MobiDBLite consensus disorder prediction 44 67 - -
Cre07g1328 462 Pfam Ethylene insensitive 3, DNA-binding domain 30 269 IPR047091 GO:0003700(InterPro)
Cre07g1328 462 SUPERFAMILY DNA-binding domain of EIN3-like 148 271 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Cre07g1328 462 MobiDBLite consensus disorder prediction 393 412 - -
Cre07g1328 462 MobiDBLite consensus disorder prediction 1 17 - -
Cre07g1328 462 FunFam Ethylene insensitive 3-like 1 142 279 - -
Cre07g1328 462 Coils Coil 29 49 - -
Cre07g1328 462 Gene3D - 58 141 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Cre07g1328 462 Gene3D - 142 278 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Cre07g1328 462 MobiDBLite consensus disorder prediction 282 304 - -
Cre07g1328 462 MobiDBLite consensus disorder prediction 1 67 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g1328 Cre-Chr7:28038929 Cre08g0804 Cre-Chr8:21113576 2.90E-84 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
54046 PF04873 EIN3 3.00E-110 No_clan Cre TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g1328 K14514 - csv:116406094 715.301