Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g1372 ATGGAGTTTCCAATTTCTCTATTCAGGATTCTCGCCTTTCTTCTTCTGTGGATTTTGCTGTGCCATGGATTTGGATCCGACGCTCAGCTTTTGCCTGAATCCGAAGTGAAAACCCTTCAAACAATATCTTCAAAACTAAAGAATCTAAGCTGGAATGTAACCCGGAGTTCTTGCATTCGAGGGGAAGGCTTTTCCAATCAAGCTTTCCTGGGGAACCAAATATTGAGGAATGTCTCATGCAATTGTACTTCCACTCTTTGTCATGTGACAATTATCCTGCTTAAGGGTCTCAATGTAACAGGAACTTTTCCAGCTGAATTTGGTAATCTTACTCATCTGCAGGAACTTGATCTTACTCGCAACCATATTATTGGCCAGCTACCCAGTAGTCTTGCCAATGCTCCTCTAGTCAAACTTTCTCTCTTGGGAAACAGGCTAAACGGTTCAATTCCCAAGGAAATTGGTGACATTGGCACCCTCGAAGAGCTGGTCTTGGAAGACAACCAGCTAACTGGAAGTCTACCTGCCAGCCTTGGAAATCTGCACGGTTTGAGAAGACTGCTTCTGTCTGCAAACAATTTCACAGGAAAAATACCAGACTCATTTGGAAACTTAAAGAACTTGGTTGATTTTAGGATAGACGGGAATGGGCTGTCTGGGAAGATTCCTGAATTCATTGGGAATTTGATCAACCTCGACAGACTGGATATACAAGGAACATCGATGGAAAATCCCATTCCTTCGACAATATCTCAATTGAAGAACCTGACTCAATTGGTCCTGAGGAACTGTTTAATTAATGGCTCAATCCCCGAGTATATTGGAGAAATGAACAAATTATCAACTCTAGATCTAAGCTTCAACCATTTAACTGGTCCAATTCCTGAGACATTTCAGAATCTGATGAAGAAAAAGATAGACTTCATGTTTCTGACAAACAACTCACTGAGTGGTGAAGTGCCTGGTTGGATCTTGAGTAGCAAAAAGAACATAGATTTGTCTTACAACAACTTTTCAGGGTCTACTCTTGCTAGTTGCCAACAATCACCTGTGAACTTGATTGCGAGTTACCCACCTGCAGTGAATCATCAAGTTCCTTGGTGCCTCAAGAAAGACCTTCCATGCTCTGGAAAAGCTGAATATCATTCCTTGTTTATTAATTGTGGAGGAACTAGATTGACGGCTGATGGGCATGATTATGAAGAGGACTTAACTACAGAAGGCAAGTCAAACTTCTTTTCTGTTTCAGAAAAATGGGCTTACAGCAGTACAGGAGTTTTTTTGGGTGATGAAAATGCTGACTATATAGCTTCAAATAAGCTTGGCCTGAATGTGAGTGGTCCACGGTATTATCAAAATGCTCGACTTTCCCCTCTCTCCCTCAAATATTATGGCCTTTGCCTGCGGAGCGGAAGCTACAATGTGAAGCTCCACTTTGCTGAAATTATGTACACTAATGATCAAACTTTTAGCAGCCTGGGAAAGCGTATATTCGATATATCAATTCAAGGAAAACTAGTGAAGAAGGATTTCAATATTATGGAGGCAGCTGGGGGTGTTGGTAAGAACTTCACAGTGGAAGATAAAAATGTTCTTGTCAATGGCAGTACCCTTGAGATTCATCTATATTGGGCTGGTAAAGGAACCACAGCTGTGCCAGACAGAGGAGTTTATGGACCCCTTATTTCTGCTATCACAGTTACGCCAAACTTTGAAATCAATGAGGGAGGTCTATCAGCTGGGGCACTTGCCGGCATCATAATTTCTTCATGTGCAGTAGTCATCATACTGGTCGTAGTATTTCTTTGGATGACAGGTTACATATGTAAGAAGGAAGTCCTAGATAATGAACTTTCTGGTGTAGATTTACAAACGGGTCATTTTACCTTGAAACAAATAAAAGCTGCCACCAACAACTTTGATCCTAAAAGTAAAATAGGCGAAGGTGGATTTGGGCCTGTCTACAAGGGTGTACTGTCAGATGGTGCTTTGATTGCCGTGAAGCAACTCTCCTCGAAATCGAAGCAAGGGAGCCGTGAGTTTGTTACTGAGATTGGCATGATATCTGCATTGCAACACCCAAACCTTGTTAAGCTCTATGGCTGCTGCGTTGAGGGAAACCAATTGTTGCTTGTATATGAATACATGGAAAATAATAGTCTTGCCCGTGCACTTTTCGGTCGAGAGGAACAAAGGCTACATCTTGACTGGCGAACAAGGAAGAAGATATGCTTGGAAATAGCTAGGGGATTAGCTTACCTTCATGAAGAATCAAGGTTAAAAATCGTTCACAGAGACATAAAGGCCACAAACGTACTGCTCGATAAAGATCTTAATGCTAAGATTTCTGACTTCGGTTTGGCTAAGCTTGACGAAGAGGAGAACACCCACATCAGCACACGAATTGCTGGAACCATCGGTTATATGGCACCCGAGTATGCAATGAGAGGATACTTGACTGATAAGGCAGATGTTTACAGCTTTGGAATTGTTGCCTTAGAGATAGTTAGTGGGAAAAGTAACACAAATTACAGGCCAAAGGAAGAGTTTGTTTATCTTCTTGATTGGGCCTATGTACTGGAAGAGCAAGGCAACCTTCTAGAACTGGTAGATCCAGACCTTGGTTCAAATTACTCATCCGAGGAAGCAATGAGGATGCTGAACGTAGCTCTCTTATGCACCAACCCATCTCCCACTCTCAGACCCGCAATGTCTTCTGTGGTGAGTATGCTTGAGGGTAAGATTGCAGTCCAAGCACCGATCATCAAGCGCACTTCGTCCGGCCAAGATCCAAGGTTTAGAGCCTTTGAGAAGCTCTCACACGACAGCCGATCGCAGGTTTCAAGCTCAACGGTTTCGCTAGATGCTGAGCCTCAAAAAAGCATGTTAATGGATGGGCCATGTACTGATTCTTCAGTGTCCATTGATACCAATGCCAATAATCTCTACCAATCTGCATCAAGTGATCCCCTCCAGAATCATCGTCGAGCTAAGTAA 2997 42.61 MEFPISLFRILAFLLLWILLCHGFGSDAQLLPESEVKTLQTISSKLKNLSWNVTRSSCIRGEGFSNQAFLGNQILRNVSCNCTSTLCHVTIILLKGLNVTGTFPAEFGNLTHLQELDLTRNHIIGQLPSSLANAPLVKLSLLGNRLNGSIPKEIGDIGTLEELVLEDNQLTGSLPASLGNLHGLRRLLLSANNFTGKIPDSFGNLKNLVDFRIDGNGLSGKIPEFIGNLINLDRLDIQGTSMENPIPSTISQLKNLTQLVLRNCLINGSIPEYIGEMNKLSTLDLSFNHLTGPIPETFQNLMKKKIDFMFLTNNSLSGEVPGWILSSKKNIDLSYNNFSGSTLASCQQSPVNLIASYPPAVNHQVPWCLKKDLPCSGKAEYHSLFINCGGTRLTADGHDYEEDLTTEGKSNFFSVSEKWAYSSTGVFLGDENADYIASNKLGLNVSGPRYYQNARLSPLSLKYYGLCLRSGSYNVKLHFAEIMYTNDQTFSSLGKRIFDISIQGKLVKKDFNIMEAAGGVGKNFTVEDKNVLVNGSTLEIHLYWAGKGTTAVPDRGVYGPLISAITVTPNFEINEGGLSAGALAGIIISSCAVVIILVVVFLWMTGYICKKEVLDNELSGVDLQTGHFTLKQIKAATNNFDPKSKIGEGGFGPVYKGVLSDGALIAVKQLSSKSKQGSREFVTEIGMISALQHPNLVKLYGCCVEGNQLLLVYEYMENNSLARALFGREEQRLHLDWRTRKKICLEIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGKSNTNYRPKEEFVYLLDWAYVLEEQGNLLELVDPDLGSNYSSEEAMRMLNVALLCTNPSPTLRPAMSSVVSMLEGKIAVQAPIIKRTSSGQDPRFRAFEKLSHDSRSQVSSSTVSLDAEPQKSMLMDGPCTDSSVSIDTNANNLYQSASSDPLQNHRRAK 998
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 28615760 28627584 - CrPI670011_07g013720.1 Cre07g1372 503953
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre07g1372 998 FunFam Putative LRR receptor-like serine/threonine-protein kinase 716 923 - -
Cre07g1372 998 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 381 570 - -
Cre07g1372 998 Pfam Protein tyrosine and serine/threonine kinase 643 909 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre07g1372 998 Gene3D Ribonuclease Inhibitor 245 355 IPR032675 -
Cre07g1372 998 ProSiteProfiles Protein kinase domain profile. 640 922 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre07g1372 998 Pfam Leucine rich repeat 159 218 IPR001611 GO:0005515(InterPro)
Cre07g1372 998 SMART LRR_typ_2 157 180 IPR003591 -
Cre07g1372 998 SMART LRR_typ_2 110 134 IPR003591 -
Cre07g1372 998 SMART LRR_typ_2 181 204 IPR003591 -
Cre07g1372 998 SMART LRR_typ_2 277 300 IPR003591 -
Cre07g1372 998 SUPERFAMILY L domain-like 72 340 - -
Cre07g1372 998 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 247 342 - -
Cre07g1372 998 CDD STKc_IRAK 646 913 - -
Cre07g1372 998 Pfam Malectin domain 384 565 IPR021720 -
Cre07g1372 998 Pfam Leucine Rich Repeat 255 276 IPR001611 GO:0005515(InterPro)
Cre07g1372 998 Pfam Leucine Rich Repeat 112 133 IPR001611 GO:0005515(InterPro)
Cre07g1372 998 Pfam Leucine Rich Repeat 279 301 IPR001611 GO:0005515(InterPro)
Cre07g1372 998 Gene3D Ribonuclease Inhibitor 31 244 IPR032675 -
Cre07g1372 998 SUPERFAMILY Protein kinase-like (PK-like) 623 923 IPR011009 -
Cre07g1372 998 Gene3D Phosphorylase Kinase; domain 1 608 715 - -
Cre07g1372 998 MobiDBLite consensus disorder prediction 965 992 - -
Cre07g1372 998 FunFam Leucine-rich repeat receptor protein kinase EMS1 150 246 - -
Cre07g1372 998 SMART serkin_6 640 909 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre07g1372 998 Gene3D Transferase(Phosphotransferase) domain 1 716 923 - -
Cre07g1372 998 Gene3D - 381 570 - -
Cre07g1372 998 MobiDBLite consensus disorder prediction 944 998 - -
Cre07g1372 998 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 609 715 - -
Cre07g1372 998 ProSitePatterns Serine/Threonine protein kinases active-site signature. 762 774 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre07g1372 998 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 13 937 IPR051824 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g0222 Cre-Chr1:1588716 Cre07g1372 Cre-Chr7:28615760 3.50E-149 dispersed
Cre07g1372 Cre-Chr7:28615760 Cre11g2138 Cre-Chr11:33088320 0.00E+00 dispersed
Cre07g1372 Cre-Chr7:28615760 Cre11g2136 Cre-Chr11:33047180 7.60E-199 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64271 PF07714 PK_Tyr_Ser-Thr 2.50E-49 CL0016 Cre PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g1372 - - - 0.0