Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre07g1399 | ATGGCAATTTCCCATTTAGTACCTTATTATTCGCCTCTTCTACGCTTTTCTCTCGCTTCGACAAAGCTCACTCCTCAACTCCATTCTCACAGATACCGCTTCTTCTCCCTCCGTGCTTCTATGGCGTCTTCACCTGCTCGCAAGGTTTTGGTTCCGGTTGCCAACGGCACCGAGCCGCTTGAGGCAGTCATCACCATTGACGTGCTTCGACGTGCTGGAGCTGATGTTACCGTTGCTTCCGTCGAGAATCATATTCGTGTTGATGCTGCGCATCAGATCAAGATTGTTGCGGATTCTCTCATTTCCGATTGCGCGGATACTGTTTTCGATCTCATCGCCCTTCCTGGAGGTATGCCAGGTGCTACCAGTCTTAGAGATTGTGAAGTTTTGCAGAACATAGTGAAGAAGCAAGCTGCAGATGGTCGACTTTATGCTGCCATCTGTGCTTCACCTGCAGTGGTGCTTGGATCATGGGGTTTGCTGAAGGGGTTGAAAGCCACATGCTATCCATCATTTATGGAGCAACTGGGATCTACTGCAACTGCTGTTGAATCCCAAGTACAGATTGATGGCCAAGTTGTGACAAGTCGTGGGCCTGGTACTACCTTGGAGTTTGCCGTTGCTCTGGTTGAGCAGCTGTATGGGAAAGAAAAAGCCGACGAAGTTTCTGGACCTCTGTTGTTGCGTTCCAACCATGGTCATGAATATACCATAGCTGAGCACAATCAAGTAAAGTGGACATTTGATGATGGCCCGAGGATTCTTGTACCTATAGGTAATGGTACTGAGGAAATGGAGGCTGTTATGATCATTGACATTCTTCGGAGAGCAAAAGGGAAAGTGGTGGTGGCTTCTGTTGAGGACAAACTAGAGATTCTTGCATCTCGAAAAGTTAAACTGGAGGCAGATTTACTCCTTGACGAAGCTGCTGAAAAGTCATACGATCTAATTGTTTTGCCTGGAGGGCTTGGTGGCGCGGAAGCATTTGAAAAATCTGAAAAACTGATTAATTTGCTAAAAAAGCAGAGAGAATCAAACAAACCCTATGGAGCAATATGTGCATCCCCGGCTTTGGTCTTAGAACCCCACGGCTTGCTGAAGAATAAGAAAGCCACTGCTTTTCCTGCATTATGTGACAAATTGTCCGACAAAAGCGAAATTGAAAACAGAGTGGTGGTTGACGGAAACCTGATTACAAGCCGGGGACCTGGAACTACGATGGAATTTTCTCTGGCAATCGTGGAGAAGCTTTTTGGAAGGGATACAGCAGTTCAACTGGGAAAAACAATGCCGGCGTGGAGTCGAACTCTGTTCTTGTTGCGGTTTGCTTCTTTTCGCGTTTGGCGGCTCAGGAAACCACGACTAAACCAGGCTCTGTTGTTATCTCTCTTTCGTGAGAGAGGAGGCAATTTCTTCAAGCTCTCTCCATCAGGTCAGAACTGTCGGAGACTTGTTGCGGTCGAGAGATTGTTGGATCAGAAGTTGAACATAATAGAAGTTGTGATGCCTTGTTTCTGTTTTAGTTCAAAAAGAAACAGAGATTCGTCGGATGCCCAAACAATTGCAGCAGTTGAAGAGATTTCAAATATTCCGAACGTTCGCTTGTACTCATACGAAGAACTTAGAAAAGCAACTGAAAATTTCAGGTCTGGAAACAAACTTGGGCAGGGAGGTTTTGGATCTGTCTACAAGGGAAGGCTCGGAAATGGAACCCTGGGTGCCATAAAGGTACTGTCCATGGATTCAAGCCAAGGGATGCGGGAGTTTTTGGCAGAAATCAATGTGATCTCAGTTATAAACCACGATAACTTGGTTACGTTGCATGGTTGTTGTGTGGAAGGGCAGCACCGGATCTTGGTCTATCCGTACCTAGAAAATAGCAGTCTTGACAAGATGCTTTTTGGTAGAGGACATGGGAATATTCAATTAAATTGGCAAACGAGGTGCAAAATATGCATTGGCATCGCACAGGGGCTAGCGTTCCTTCATGAGGAGGTTCAGCCGCATGTTATACATAGGGACATCAAGGCAAGCAATATCCTGCTTGATAAGGATTTAACCCCAAAAATTTCTGATTTTGGTCTTGCTAGACTACTCCCTGCTCACTTGACCCATGTTAGTACACGTGTTGCCGGGACAACAGGTTATCTTGCACCTGAATTTGCTATACGGGGGCAAGCGACAAGAAGAACAGATATTTATAGTTTTGGTGTCTTACTCTTGGAGATTGTTTGTGGGAGATACAACATAAATAGACGGTTTCCTGCTGAGGAACCATACCTTCTTGAAATGGTATGGGAGCATCATGAGAAAGGGCAATTGCTGGAATTGGTAGACCTATCATTACATGGAGACTATGGGACTGAGGAGGCCTGCAGATATTTAAAAGTTGGTCTTCTCTGCACCCAAGATATGCCAAAACTCCGTCCATCTATGTCGACCGTCGTCAAGATGCTAACAGGTGATATTGATATATCTGATCAAACAATATCAAGACCAGGAATGCTTTCAGAGTTCATGCTTCGAAAAGATGTACTATGCAAGAAGGGCGAGTTAACAACTGAAGACTCAGGAAAGCCAATTGATTCAACTTCATCATCAGGATACATTGACACCTCACATGCTACAATAACCTTCAATTCGATATTTGATCGTAGTAACTGA | 2664 | 44.97 | MAISHLVPYYSPLLRFSLASTKLTPQLHSHRYRFFSLRASMASSPARKVLVPVANGTEPLEAVITIDVLRRAGADVTVASVENHIRVDAAHQIKIVADSLISDCADTVFDLIALPGGMPGATSLRDCEVLQNIVKKQAADGRLYAAICASPAVVLGSWGLLKGLKATCYPSFMEQLGSTATAVESQVQIDGQVVTSRGPGTTLEFAVALVEQLYGKEKADEVSGPLLLRSNHGHEYTIAEHNQVKWTFDDGPRILVPIGNGTEEMEAVMIIDILRRAKGKVVVASVEDKLEILASRKVKLEADLLLDEAAEKSYDLIVLPGGLGGAEAFEKSEKLINLLKKQRESNKPYGAICASPALVLEPHGLLKNKKATAFPALCDKLSDKSEIENRVVVDGNLITSRGPGTTMEFSLAIVEKLFGRDTAVQLGKTMPAWSRTLFLLRFASFRVWRLRKPRLNQALLLSLFRERGGNFFKLSPSGQNCRRLVAVERLLDQKLNIIEVVMPCFCFSSKRNRDSSDAQTIAAVEEISNIPNVRLYSYEELRKATENFRSGNKLGQGGFGSVYKGRLGNGTLGAIKVLSMDSSQGMREFLAEINVISVINHDNLVTLHGCCVEGQHRILVYPYLENSSLDKMLFGRGHGNIQLNWQTRCKICIGIAQGLAFLHEEVQPHVIHRDIKASNILLDKDLTPKISDFGLARLLPAHLTHVSTRVAGTTGYLAPEFAIRGQATRRTDIYSFGVLLLEIVCGRYNINRRFPAEEPYLLEMVWEHHEKGQLLELVDLSLHGDYGTEEACRYLKVGLLCTQDMPKLRPSMSTVVKMLTGDIDISDQTISRPGMLSEFMLRKDVLCKKGELTTEDSGKPIDSTSSSGYIDTSHATITFNSIFDRSN | 887 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 28896595 | 28911475 | + | CrPI670011_07g013990.1 | Cre07g1399 | 503980 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre07g1399 | 887 | SUPERFAMILY | Class I glutamine amidotransferase-like | 47 | 228 | IPR029062 | - | |
Cre07g1399 | 887 | Pfam | Protein tyrosine and serine/threonine kinase | 551 | 816 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre07g1399 | 887 | ProSiteProfiles | Protein kinase domain profile. | 548 | 830 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre07g1399 | 887 | Gene3D | - | 40 | 241 | IPR029062 | - | |
Cre07g1399 | 887 | Gene3D | - | 248 | 435 | IPR029062 | - | |
Cre07g1399 | 887 | CDD | GATase1_DJ-1 | 254 | 417 | - | - | |
Cre07g1399 | 887 | SMART | serkin_6 | 548 | 819 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre07g1399 | 887 | FunFam | Serine/threonine-protein kinase receptor | 518 | 623 | - | - | |
Cre07g1399 | 887 | SUPERFAMILY | Protein kinase-like (PK-like) | 527 | 819 | IPR011009 | - | |
Cre07g1399 | 887 | NCBIfam | DJ-1 family glyoxalase III | 254 | 426 | IPR006287 | - | |
Cre07g1399 | 887 | NCBIfam | DJ-1 family glyoxalase III | 48 | 223 | IPR006287 | - | |
Cre07g1399 | 887 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 | 481 | 843 | IPR052059 | GO:0004674(PANTHER)|GO:0006468(PANTHER) | |
Cre07g1399 | 887 | Pfam | DJ-1/PfpI family | 47 | 212 | IPR002818 | - | |
Cre07g1399 | 887 | Pfam | DJ-1/PfpI family | 253 | 415 | IPR002818 | - | |
Cre07g1399 | 887 | CDD | STKc_IRAK | 554 | 821 | - | - | |
Cre07g1399 | 887 | Gene3D | Transferase(Phosphotransferase) domain 1 | 624 | 830 | - | - | |
Cre07g1399 | 887 | FunFam | Protein DJ-1 homolog C | 246 | 433 | - | - | |
Cre07g1399 | 887 | CDD | GATase1_DJ-1 | 49 | 213 | - | - | |
Cre07g1399 | 887 | Coils | Coil | 283 | 303 | - | - | |
Cre07g1399 | 887 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 670 | 682 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre07g1399 | 887 | Gene3D | Phosphorylase Kinase; domain 1 | 519 | 623 | - | - | |
Cre07g1399 | 887 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 624 | 831 | - | - | |
Cre07g1399 | 887 | SUPERFAMILY | Class I glutamine amidotransferase-like | 253 | 430 | IPR029062 | - | |
Cre07g1399 | 887 | FunFam | Protein DJ-1 homolog C | 41 | 231 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre05g2715 | Cre-Chr5:38039352 | Cre07g1399 | Cre-Chr7:28896595 | 4.30E-78 | dispersed | |
Cre07g1399 | Cre-Chr7:28896595 | Cre11g2138 | Cre-Chr11:33088320 | 4.10E-87 | dispersed | |
Cre02g0960 | Cre-Chr2:6879095 | Cre07g1399 | Cre-Chr7:28896595 | 1.70E-101 | transposed | |
Cre03g0882 | Cre-Chr3:7559766 | Cre07g1399 | Cre-Chr7:28896595 | 2.90E-91 | transposed | |
Cre07g1434 | Cre-Chr7:29393672 | Cre07g1399 | Cre-Chr7:28896595 | 4.90E-129 | transposed | |
Cre10g2306 | Cre-Chr10:37307713 | Cre07g1399 | Cre-Chr7:28896595 | 5.20E-90 | transposed | |
Cre11g2136 | Cre-Chr11:33047180 | Cre07g1399 | Cre-Chr7:28896595 | 1.90E-80 | wgd | |
Cre04g1994 | Cre-Chr4:37315942 | Cre07g1399 | Cre-Chr7:28896595 | 3.10E-65 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64272 | PF00069 | Pkinase | 4.00E-43 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre07g1399 | K03152 | - | csv:101212934 | 772.696 |