Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g1421 ATGAAGGAGAAGTTGAATCAGGAAGAAAGGGACAAAGAGGGACTGTCTTTGAACCTTCGAGACCACCGAGCCTCAGTCACCGGGCGGGGCCGAGGCCAACTCTGGTTTCTTCTCATCGGGGCATATCGTTGTTTGATGTCGAGCAGCAACATGGGGCTGCGTTTTATGTCATACCCACGGAAGAATCTGCTGACGAAGTTCTCGTCTCTGTTCCCAATAACTGCAATTCCCAGTATCAAGACTGTCAAAGGGGGTTTCTCTTGCAGTTGTAGTGTTGGTTGTCAATTCAACTTGGATGATTTTAGCAGCAAGAAGAGGCATTTGGAAAGAGTTCACTCCACCAATTCAAATGGGAAGTTTAGCAATAAGCAGTTTATTAGTGTTGATCCACAACTTTACGAGTATATTCTCTCCAATGTTCGAGAGCCTGAGATCCTGGGGAAACTTCGTGAGGAGACTGCCTCAATGCGTGGTAGCAAAATGCAGGTATCCCCCGATCAAGCACAACTTCTTGCAATGCTTGTTCAGATTCTTGGTGCTAAGAGGTGCATCGAAGTGGGTGTTTACACTGGATATTCGTCTTTGGCCGTAGCACTAGTCCTGCCAGAATCAGGGCATTTAGTTGCCTGTGAAAGAGATCTCAAATACCTTGAGGTTGCTAAAAGATATTATGAACTTGCCGGTGTTTCACACAAAGTGGATATGAGACATGGACTTGCAGCAGATACACTCAAATCACTTATTTCAAATGGTGAAGCTTGCAGCTATGATTTTGCGTTCATCGATGCCGAGAAGAGGATGAATGAGGAATACTTCGAACTGCTACTACAATTGGTCAGGGTTGGAGGCTTAATTGTGATTGACAATGTCCTTTGGTACGGAAAAGTAGCTGACCCGATGGTTAATGACAAGAAAACCGATAGCATCAGGAGATTGAATAAAAAGATAATGGAAGACAATCGAGTTGGGATAAGCATGGTACCTATTGGAGATGGCATGACAATTTGCCAAAAGAGATGA 1020 44.41 MKEKLNQEERDKEGLSLNLRDHRASVTGRGRGQLWFLLIGAYRCLMSSSNMGLRFMSYPRKNLLTKFSSLFPITAIPSIKTVKGGFSCSCSVGCQFNLDDFSSKKRHLERVHSTNSNGKFSNKQFISVDPQLYEYILSNVREPEILGKLREETASMRGSKMQVSPDQAQLLAMLVQILGAKRCIEVGVYTGYSSLAVALVLPESGHLVACERDLKYLEVAKRYYELAGVSHKVDMRHGLAADTLKSLISNGEACSYDFAFIDAEKRMNEEYFELLLQLVRVGGLIVIDNVLWYGKVADPMVNDKKTDSIRRLNKKIMEDNRVGISMVPIGDGMTICQKR 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 29227028 29233338 + CrPI670011_07g014210.1 Cre07g1421 504002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g1421 339 Pfam O-methyltransferase 140 338 IPR002935 GO:0008171(InterPro)
Cre07g1421 339 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 122 339 IPR002935 GO:0008171(InterPro)
Cre07g1421 339 PANTHER O-METHYLTRANSFERASE-RELATED 126 338 IPR050362 GO:0008757(PANTHER)
Cre07g1421 339 Gene3D Vaccinia Virus protein VP39 111 339 IPR029063 -
Cre07g1421 339 Coils Coil 5 25 - -
Cre07g1421 339 ProSitePatterns Zinc finger C2H2 type domain signature. 90 112 IPR013087 -
Cre07g1421 339 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 133 339 IPR029063 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g1421 Cre-Chr7:29227028 Cre11g1800 Cre-Chr11:29583350 9.60E-37 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g1421 - - - 0.0