Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g1425 ATGGGGGACGAAGTGAAGCTTTTAGATTTTTGGCCCAGCATGTTCGGTATGCGAGTCAGAGTAGCTCTGGCTCTAAAGGGCGTACCGAACGAATATGTGGATGAAGATCTAAGGAACAAGAGCTCTTTGCTTCTTCAAATGAACCCAATTCATAAGAAGATCCCTGTTCTTGTTCATAATGGAAAACCCATTTGTGAATCTTCCATAATCGTTCAGTATATTGATGAAGTTTGGAAGGATAAAGCTCCTCTGTTGCCATCTGATCCTTATGACAGAGCTCAGGCCAGATTTTGGGTAGATTTCATCGACAAGAAGCTTTTTGATGGTGGAAGGAAAATTTGGGCTACCAAAGGAGAGGAGCAAGAAGAAGGTAAGAAGGAGGTAATAGGAATATTGAAACAATTGGAAGAAGTTCTTGGGGAGAAGGGTTTGTTTGGAGGTGAATGTTTGGGATTTTTAGACATTGTTTTGATTGGATATTACACTTGGTTTTATGCCTATGAGACCATTGGAAACTTCAGCATTGAGGCTGAGTGTCCAAAGATAATGAGTTGGGTGAAGAGATGCTTACAAAATGAGAGTGTTGCTAAGTCTCTGCCTCACCCCAAGAAGGTTTGTGACTTTGTGCTTCAAATGAAGAAAAAGTATGGCCTCGACTAA 660 41.06 MGDEVKLLDFWPSMFGMRVRVALALKGVPNEYVDEDLRNKSSLLLQMNPIHKKIPVLVHNGKPICESSIIVQYIDEVWKDKAPLLPSDPYDRAQARFWVDFIDKKLFDGGRKIWATKGEEQEEGKKEVIGILKQLEEVLGEKGLFGGECLGFLDIVLIGYYTWFYAYETIGNFSIEAECPKIMSWVKRCLQNESVAKSLPHPKKVCDFVLQMKKKYGLD 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 29280418 29281192 + CrPI670011_07g014250.1 Cre07g1425 504006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g1425 219 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Cre07g1425 219 CDD GST_C_Tau 89 212 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Cre07g1425 219 SUPERFAMILY GST C-terminal domain-like 76 216 IPR036282 -
Cre07g1425 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 209 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Cre07g1425 219 SFLD Glutathione Transferase (cytosolic) 2 217 IPR040079 -
Cre07g1425 219 FunFam Glutathione S-transferase U20 88 219 - -
Cre07g1425 219 Pfam Glutathione S-transferase, C-terminal domain 116 191 IPR004046 -
Cre07g1425 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Cre07g1425 219 Gene3D - 88 219 - -
Cre07g1425 219 FunFam Tau class glutathione S-transferase 1 87 - -
Cre07g1425 219 Gene3D Glutaredoxin 1 87 - -
Cre07g1425 219 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Cre07g1425 219 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Cre07g1425 219 CDD GST_N_Tau 5 78 - -
Cre07g1425 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 216 IPR010987 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre06g2315 Cre-Chr6:31098298 Cre07g1425 Cre-Chr7:29280418 6.30E-40 dispersed
Cre07g1423 Cre-Chr7:29256324 Cre07g1425 Cre-Chr7:29280418 2.40E-97 dispersed
Cre07g1425 Cre-Chr7:29280418 Cre09g1687 Cre-Chr9:34714983 3.60E-69 dispersed
Cre07g1424 Cre-Chr7:29277902 Cre07g1425 Cre-Chr7:29280418 2.50E-102 tandem
Cre07g1425 Cre-Chr7:29280418 Cre07g1426 Cre-Chr7:29284880 5.20E-60 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g1425 K00799 - csv:101217848 404.445