Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre07g1425 | ATGGGGGACGAAGTGAAGCTTTTAGATTTTTGGCCCAGCATGTTCGGTATGCGAGTCAGAGTAGCTCTGGCTCTAAAGGGCGTACCGAACGAATATGTGGATGAAGATCTAAGGAACAAGAGCTCTTTGCTTCTTCAAATGAACCCAATTCATAAGAAGATCCCTGTTCTTGTTCATAATGGAAAACCCATTTGTGAATCTTCCATAATCGTTCAGTATATTGATGAAGTTTGGAAGGATAAAGCTCCTCTGTTGCCATCTGATCCTTATGACAGAGCTCAGGCCAGATTTTGGGTAGATTTCATCGACAAGAAGCTTTTTGATGGTGGAAGGAAAATTTGGGCTACCAAAGGAGAGGAGCAAGAAGAAGGTAAGAAGGAGGTAATAGGAATATTGAAACAATTGGAAGAAGTTCTTGGGGAGAAGGGTTTGTTTGGAGGTGAATGTTTGGGATTTTTAGACATTGTTTTGATTGGATATTACACTTGGTTTTATGCCTATGAGACCATTGGAAACTTCAGCATTGAGGCTGAGTGTCCAAAGATAATGAGTTGGGTGAAGAGATGCTTACAAAATGAGAGTGTTGCTAAGTCTCTGCCTCACCCCAAGAAGGTTTGTGACTTTGTGCTTCAAATGAAGAAAAAGTATGGCCTCGACTAA | 660 | 41.06 | MGDEVKLLDFWPSMFGMRVRVALALKGVPNEYVDEDLRNKSSLLLQMNPIHKKIPVLVHNGKPICESSIIVQYIDEVWKDKAPLLPSDPYDRAQARFWVDFIDKKLFDGGRKIWATKGEEQEEGKKEVIGILKQLEEVLGEKGLFGGECLGFLDIVLIGYYTWFYAYETIGNFSIEAECPKIMSWVKRCLQNESVAKSLPHPKKVCDFVLQMKKKYGLD | 219 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 29280418 | 29281192 | + | CrPI670011_07g014250.1 | Cre07g1425 | 504006 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre07g1425 | 219 | SFLD | Main.3: Omega- and Tau-like | 2 | 217 | IPR045073 | - | |
Cre07g1425 | 219 | CDD | GST_C_Tau | 89 | 212 | IPR045074 | GO:0004364(InterPro)|GO:0006749(InterPro) | |
Cre07g1425 | 219 | SUPERFAMILY | GST C-terminal domain-like | 76 | 216 | IPR036282 | - | |
Cre07g1425 | 219 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 4 | 209 | IPR045073 | GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER) | |
Cre07g1425 | 219 | SFLD | Glutathione Transferase (cytosolic) | 2 | 217 | IPR040079 | - | |
Cre07g1425 | 219 | FunFam | Glutathione S-transferase U20 | 88 | 219 | - | - | |
Cre07g1425 | 219 | Pfam | Glutathione S-transferase, C-terminal domain | 116 | 191 | IPR004046 | - | |
Cre07g1425 | 219 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 3 | 82 | IPR004045 | - | |
Cre07g1425 | 219 | Gene3D | - | 88 | 219 | - | - | |
Cre07g1425 | 219 | FunFam | Tau class glutathione S-transferase | 1 | 87 | - | - | |
Cre07g1425 | 219 | Gene3D | Glutaredoxin | 1 | 87 | - | - | |
Cre07g1425 | 219 | Pfam | Glutathione S-transferase, N-terminal domain | 5 | 76 | IPR004045 | - | |
Cre07g1425 | 219 | SUPERFAMILY | Thioredoxin-like | 5 | 106 | IPR036249 | - | |
Cre07g1425 | 219 | CDD | GST_N_Tau | 5 | 78 | - | - | |
Cre07g1425 | 219 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 88 | 216 | IPR010987 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre06g2315 | Cre-Chr6:31098298 | Cre07g1425 | Cre-Chr7:29280418 | 6.30E-40 | dispersed | |
Cre07g1423 | Cre-Chr7:29256324 | Cre07g1425 | Cre-Chr7:29280418 | 2.40E-97 | dispersed | |
Cre07g1425 | Cre-Chr7:29280418 | Cre09g1687 | Cre-Chr9:34714983 | 3.60E-69 | dispersed | |
Cre07g1424 | Cre-Chr7:29277902 | Cre07g1425 | Cre-Chr7:29280418 | 2.50E-102 | tandem | |
Cre07g1425 | Cre-Chr7:29280418 | Cre07g1426 | Cre-Chr7:29284880 | 5.20E-60 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre07g1425 | K00799 | - | csv:101217848 | 404.445 |