Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre07g1434 | ATGAACATGAAATGGACCAACGTCATCGATTTGTTGCTACGAATTCTCTCAGCTCACCTTCTAAGATTTCAGTATTTAAAGGTAAAACCCCCAACAAGAAGTTTGGTCGATGAAGAAGAATTTTCGAGCATGCAAAATGTTAAATTTTACACATACAAAGAGCTAAAAGTTGCAACCGGAGATTTCAGCTTGGCGAATAAAATAGGGGAGGGAGGTTTTGGTTCTGTCTACAAGGGAAAGCTAAAAGATGGAAAGATTGCTGCCATAAAAGTTCTTTCGGCTGAGTCAAGACAAGGATTGAGGGAATTCTTGACAGAAATTAATGTCATCTCTGTGATAGAACATGAAAATCTGGTTCAGCTTTATGGCTGCTGTGTGGATGATAATCATAGAATTCTTGTCTACAATTACCTTGAGAACAATAGCCTCGCCCAAACTCTTCTTGGGCGAGGTTACAGTAGCATCCAGTTTAATTGGCAAACAAGGTCTAAGATTTGCATTGGAATTGCACGTGGCCTTGCCTTCCTTCACGAGGATGTACAGCCACATATCATTCATAGAGATATCAAAGCGAGCAACATTCTTCTTGATCATGACCTCTCTCCTAAAATTTCAGATTTTGGTCTTGCAAAGCTTATTCCAGCCAGCATGACTCACGTCAGTACACGAGTGGCAGGAACAATTGGTTACCTAGCTCCAGAATATGCGATAAGAGGGCAGGTGACAAGAAAATCAGATATTTACAGTTTTGGAGTCCTCCTTGTGGAAATAGTCAGCGGGAGATGCAACACAAATACACAATTACCAATTGGAGAACAATATCTTCTTGAAAGGACATGGAATCTTTATGAGCGAGGAGAGCTCGTTCTGCTAGTTGATTTGTCCTTAAATGGCGACTTCGATGCAGAGGAGGCTTGTAAATATCTAAAGATTGGTCTACTTTGCACACAAGACAGTCCAAAACTCCGTCCATCCATGTCGACTGTGGTAAAGATGCTAACAGGAGAGATGAGTATTGAAGACAGAAAGATAACGAAACCGGGGCTGATTTCGGACTTCATGGATCTAAAAGTAAAGAATCCAGAGGAAAAGAAAGGGAATAGAGAGGGGGTGTCTTCTGATAGTCTATCCTCTGGATCAAACATCCTTGGAAATTCAACAATGTCATCTGAAGCCTCAACTGTTACATCTACAACCTTCACTGCACAATATGACAGGAATACTTTCTCATCTGTAATGTCGGCCATGGGGGTTGAGGCCTTGACCCATAGGAAGTGGGCTGCCGCAAAAGGAAAGAGGCCTATCTCAATCTCAGCCTCAAAGGCCGAGGCGTGCACCTTGAGCCACTCAACATAA | 1356 | 42.18 | MNMKWTNVIDLLLRILSAHLLRFQYLKVKPPTRSLVDEEEFSSMQNVKFYTYKELKVATGDFSLANKIGEGGFGSVYKGKLKDGKIAAIKVLSAESRQGLREFLTEINVISVIEHENLVQLYGCCVDDNHRILVYNYLENNSLAQTLLGRGYSSIQFNWQTRSKICIGIARGLAFLHEDVQPHIIHRDIKASNILLDHDLSPKISDFGLAKLIPASMTHVSTRVAGTIGYLAPEYAIRGQVTRKSDIYSFGVLLVEIVSGRCNTNTQLPIGEQYLLERTWNLYERGELVLLVDLSLNGDFDAEEACKYLKIGLLCTQDSPKLRPSMSTVVKMLTGEMSIEDRKITKPGLISDFMDLKVKNPEEKKGNREGVSSDSLSSGSNILGNSTMSSEASTVTSTTFTAQYDRNTFSSVMSAMGVEALTHRKWAAAKGKRPISISASKAEACTLSHST | 451 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 29393672 | 29402996 | - | CrPI670011_07g014340.1 | Cre07g1434 | 504015 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre07g1434 | 451 | FunFam | cold-responsive protein kinase 1 | 138 | 349 | - | - | |
Cre07g1434 | 451 | Gene3D | Transferase(Phosphotransferase) domain 1 | 138 | 347 | - | - | |
Cre07g1434 | 451 | CDD | STKc_IRAK | 68 | 335 | - | - | |
Cre07g1434 | 451 | SMART | serkin_6 | 62 | 333 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre07g1434 | 451 | Gene3D | Phosphorylase Kinase; domain 1 | 33 | 137 | - | - | |
Cre07g1434 | 451 | Pfam | Protein kinase domain | 64 | 267 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre07g1434 | 451 | ProSiteProfiles | Protein kinase domain profile. | 62 | 339 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre07g1434 | 451 | SUPERFAMILY | Protein kinase-like (PK-like) | 42 | 333 | IPR011009 | - | |
Cre07g1434 | 451 | ProSitePatterns | Protein kinases ATP-binding region signature. | 68 | 90 | IPR017441 | GO:0005524(InterPro) | |
Cre07g1434 | 451 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 | 43 | 369 | IPR052059 | GO:0004674(PANTHER)|GO:0006468(PANTHER) | |
Cre07g1434 | 451 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 184 | 196 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre07g1434 | 451 | FunFam | cold-responsive protein kinase 1 | 33 | 137 | - | - | |
Cre07g1434 | 451 | MobiDBLite | consensus disorder prediction | 371 | 390 | - | - | |
Cre07g1434 | 451 | MobiDBLite | consensus disorder prediction | 360 | 390 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre04g0986 | Cre-Chr4:28454958 | Cre07g1434 | Cre-Chr7:29393672 | 4.30E-101 | dispersed | |
Cre07g1434 | Cre-Chr7:29393672 | Cre10g2306 | Cre-Chr10:37307713 | 1.40E-91 | dispersed | |
Cre07g1434 | Cre-Chr7:29393672 | Cre07g1399 | Cre-Chr7:28896595 | 4.90E-129 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64275 | PF00069 | Pkinase | 4.40E-47 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre07g1434 | - | - | - | 0.0 |