Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g1453 ATGCTTCGCAGCTTAATTCCTCATTCCCCCATCAATTCCACCTCCAATTCCCCATCCTCCATGAACTCCAAACGCTCCGACCCCGACTCCTCCCCCGACCACCCTTCTTCCAAGAGGCTCAATTCACGTCCCAACAACTTCTCCGCCCCCGGTAAGGCCGTCCACCACCCAGACCTCGACGAAGACCAAGAGGACCCGCCTCTCGTCGACGGCACTGACTCCACTGGTTTGAGATTGCTAGGGCTTCTCCTTCAATGCGCCGAGTGCGTCGCCATCGATAATCTCCAGGAGGCCAACGATCTCTTGCCGGAGATCTCCGAGCTCTCCTCGCCCTTCGGAACCTCGCCTGAGCGAGTCGGCGCGTACTTCGCCCACGCGCTTCAAGCCAGAGTTATAAGCTCCTGCTTGGGAACATACTCGCCGTTAACCATCAGAACGTTGAATCAAACTCAGTCGCAGAGAATTTTCAACGCCCTCCAATCCTACAATTCCATCAGTCCGTTGATTAAGTTCTCTCACTTCACCGCCAATCAAGCCATCTTCCAAGCCTTGGACGGTGAAGATCGAGTCCACGTGATCGACCTCGACGTAATGCAAGGTCTCCAATGGCCTGGATTGTTCCACATCCTCGCTTCCCGGCCAAAGAAGATCCAATCCCTACGAATCTCCGGCTTCGGATCCTCTTCCGAGTTGCTTCAATCAACCGGAAGAAGACTGGCGGATTTTGCAACTTCTCTAGGTCTCCCCTTCGAATTCCATCCAGTGGAAGGCAAAATCGGAAACCTAACAAACCCCAATCAACTGGAATTGAGAGCCGGCGAGACAGTTGTAGTTCACTGGATGCACCATTGCTTATACGACGTAACAGGAAGCGATATAGGTACGCTTAGATTACTTTCAACTCTAAAACCAAAACTAATCACCATTGTTGAACAAGATCTGAGTCATGGAGGTAGTTTTTTAGGAAGATTTGTAGAGGCTCTTCATTATTACAGCGCGTTATTCGACGCGCTTGGTGATAGTTTAACCATGGATAATCTGGAAAGACATGTGGTAGAGCAACAATTGTTTGGTTGTGAGATTAGGAACATTATCGCCGTTGGTGGACCCAAAAGAACCGGTGAAGTTAAAGTCGAAAGATGGGGCGATGAACTGAAACGGGTCGGGTTTAAACCCGTTTCTCTTGGAGGTAACCCGGCTGCTCAAGCCAGTTTACTTCTTGGAATGTTTCCTTGGAAAGGCTATACTCTTGTTGAAGAAAATGGGTGCCTTAAACTTGGATGGAAGGACTTATCTCTTCTCACAGCCTCCGCCTGGCAGCCCTCCGATTGA 1332 50.23 MLRSLIPHSPINSTSNSPSSMNSKRSDPDSSPDHPSSKRLNSRPNNFSAPGKAVHHPDLDEDQEDPPLVDGTDSTGLRLLGLLLQCAECVAIDNLQEANDLLPEISELSSPFGTSPERVGAYFAHALQARVISSCLGTYSPLTIRTLNQTQSQRIFNALQSYNSISPLIKFSHFTANQAIFQALDGEDRVHVIDLDVMQGLQWPGLFHILASRPKKIQSLRISGFGSSSELLQSTGRRLADFATSLGLPFEFHPVEGKIGNLTNPNQLELRAGETVVVHWMHHCLYDVTGSDIGTLRLLSTLKPKLITIVEQDLSHGGSFLGRFVEALHYYSALFDALGDSLTMDNLERHVVEQQLFGCEIRNIIAVGGPKRTGEVKVERWGDELKRVGFKPVSLGGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDLSLLTASAWQPSD 443
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 29616524 29617855 + CrPI670011_07g014530.1 Cre07g1453 504034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g1453 443 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 45 439 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)|GO:0048366(PANTHER)|GO:0090610(PANTHER)
Cre07g1453 443 Pfam GRAS domain family 81 440 IPR005202 -
Cre07g1453 443 MobiDBLite consensus disorder prediction 7 26 - -
Cre07g1453 443 ProSiteProfiles GRAS family profile. 70 440 IPR005202 -
Cre07g1453 443 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g1453 Cre-Chr7:29616524 Cre09g0776 Cre-Chr9:7677635 4.50E-87 dispersed
Cre07g1453 Cre-Chr7:29616524 Cre10g2227 Cre-Chr10:36712493 1.50E-37 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
54055 PF03514 GRAS 2.00E-116 CL0063 Cre TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g1453 K27742 - csv:101212169 739.569