Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre07g1471 | ATGTTCGCCTTCTCCGTTCTCCTCCTCCTCCTCGTCTTCCTTCTTTTCTTTCATTATCTTTTCAAATTCTCCGCCCCCGCTCGTCGGAAGCTTCCCCTTCCGCCGGGCTCAATGGGCTGGCCCTATTTGGGTGAGACCCTCCAACTTTACTCTCAAGATCCCAATGTCTTCTTTGCCTCAAAAAAGAAGAGATATGGTCCAATTTTCAAGTCCCATATATTGGGTTATCCTTGTGTGATGGTTTCTAGTCCTGAAGCTGCTAAGTTTGTGTTGGTCACTAAAGCTCATCTCTTTAAGCCTACATTTCCAGCTAGTAAAGAGAGGATGTTGGGCAAAAATGCTATCTTCTTTCATCAAGGAGATTACCATGCTAAATTGAGGCGCCTCGTCCTCCGAACTTTCATGCCCGAGGCAATTAGAAACATCGTCCCCAGCATCGAATCCATTGCTAAAAACACTGTTCAATCATGGGATGGACAATTGATCAACACCTTTCAAGAAATGAAGATGTTCGCATTCGAGGTTTCGTTACTTTCGATATTCGGAAAAGACGAAGCTCTTTACTTCGAAGACCTCAAACGATGCTACTACATTCTCGAAAAAGGCTACAATTCGATGCCGATTAACCTACCCGGAACACTCTTCCACAAGGCCATGAAAGCAAGGAAAGAGCTAGCACATATCTTGAACAAGATCCTGTCAACCAGGAGGGAAATGAAGCGCGACCACAACGACCTCCTCGGATCTTTCATGGGTGAAAAGGAAGGCCTCACCGATGAACAGATTGCCGATAACGTCATCGGTCTCATCTTCGCTGCTCGGGACACGACCGCCAGTGTTCTAACATGGATCTTGAAGTACCTAGGAGAAAACCCAAGTGTTCTTCAAGCTGTCACTGCTGAACAAGAAGCAATAATGAAACAAAAACAGAGTGGTGATGATAATCTCACCTGGGCTGACACCAAAAACATGCCAATCACTTCAAGGGTTATTCAAGAAACCCTAAGAATGGCTTCGGTTCTATCATTTACTTTCAGAGAAGCAGTGGAAGATGTTGAATTTGATGGATATTTGATTCCAAAAGGATGGAAAGTTTTGCCTCTTTTCAGAAACATTCATCACAGCCCAGAAAATTTCCCTCAGCCTGACAAATTTGATCCTACAAGATTTGAGGTTGCTCAAAAACCCAATACCTACATGCCATTTGGCAATGGGACCCACTCTTGTCCAGGAAATGAATTAGCCAAGCTAGAGATGCTGGTTTTACTCCATCACTTAACCACCAAGTACAGGTGGAATGTAGTTGGTGCACAAGAAGGGATTCAATATGGTCCTTTTGCCCTTCCTCTCAATGGCCTTCCAATAAAAATATGTCTCAAGAAGTAA | 1386 | 43.94 | MFAFSVLLLLLVFLLFFHYLFKFSAPARRKLPLPPGSMGWPYLGETLQLYSQDPNVFFASKKKRYGPIFKSHILGYPCVMVSSPEAAKFVLVTKAHLFKPTFPASKERMLGKNAIFFHQGDYHAKLRRLVLRTFMPEAIRNIVPSIESIAKNTVQSWDGQLINTFQEMKMFAFEVSLLSIFGKDEALYFEDLKRCYYILEKGYNSMPINLPGTLFHKAMKARKELAHILNKILSTRREMKRDHNDLLGSFMGEKEGLTDEQIADNVIGLIFAARDTTASVLTWILKYLGENPSVLQAVTAEQEAIMKQKQSGDDNLTWADTKNMPITSRVIQETLRMASVLSFTFREAVEDVEFDGYLIPKGWKVLPLFRNIHHSPENFPQPDKFDPTRFEVAQKPNTYMPFGNGTHSCPGNELAKLEMLVLLHHLTTKYRWNVVGAQEGIQYGPFALPLNGLPIKICLKK | 461 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 29938299 | 29940519 | + | CrPI670011_07g014710.1 | Cre07g1471 | 504052 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre07g1471 | 461 | Pfam | Cytochrome P450 | 34 | 439 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre07g1471 | 461 | Gene3D | Cytochrome P450 | 24 | 458 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre07g1471 | 461 | PRINTS | P450 superfamily signature | 409 | 420 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre07g1471 | 461 | PRINTS | P450 superfamily signature | 329 | 340 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre07g1471 | 461 | PRINTS | P450 superfamily signature | 400 | 409 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre07g1471 | 461 | PRINTS | P450 superfamily signature | 272 | 289 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre07g1471 | 461 | CDD | CYP90-like | 63 | 457 | - | - | |
| Cre07g1471 | 461 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 402 | 411 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cre07g1471 | 461 | FunFam | Abscisic acid 8 | 24 | 459 | - | - | |
| Cre07g1471 | 461 | PRINTS | E-class P450 group I signature | 62 | 81 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre07g1471 | 461 | PRINTS | E-class P450 group I signature | 399 | 409 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre07g1471 | 461 | PRINTS | E-class P450 group I signature | 281 | 307 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre07g1471 | 461 | PRINTS | E-class P450 group I signature | 328 | 346 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre07g1471 | 461 | PRINTS | E-class P450 group I signature | 409 | 432 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre07g1471 | 461 | PRINTS | E-class P450 group I signature | 368 | 392 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre07g1471 | 461 | PRINTS | E-class P450 group I signature | 261 | 278 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre07g1471 | 461 | PANTHER | CYTOCHROME P450 26 | 32 | 430 | - | GO:0004497(PANTHER)|GO:0009687(PANTHER)|GO:0010295(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)|GO:0016709(PANTHER) | |
| Cre07g1471 | 461 | SUPERFAMILY | Cytochrome P450 | 28 | 457 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre02g0952 | Cre-Chr2:6742332 | Cre07g1471 | Cre-Chr7:29938299 | 1.00E-152 | dispersed | |
| Cre03g0446 | Cre-Chr3:2855317 | Cre07g1471 | Cre-Chr7:29938299 | 5.00E-154 | dispersed | |
| Cre06g2279 | Cre-Chr6:30715970 | Cre07g1471 | Cre-Chr7:29938299 | 6.40E-58 | dispersed | |
| Cre07g1471 | Cre-Chr7:29938299 | Cre08g1540 | Cre-Chr8:28014050 | 6.50E-153 | dispersed | |
| Cre07g1471 | Cre-Chr7:29938299 | Cre05g2177 | Cre-Chr5:33509965 | 4.60E-159 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre07g1471 | K09843 | - | csv:101212508 | 871.692 |