Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g1480 ATGCTGCTGGGTTCTTCTTGTTTCCAGAAGAAGATGGCCAGTGAAAACTTTGGGTTATGGCTATTTTTTATTGCTTCTCTACAGTTTTTCCTTCAAGCACAGTGTATTAATGTGGGGATTACTTATGTTCAAGATGCTGGTATCAAAGGAGCTGTTTGTTTGGATGGAAGTCCTCCAGCTTATCACTTCAGCGACGGATTTGGCTCGGGAGTCGATAATTGGTTGATACAACTCGAGGGAGGAGGATGGTGCAACAATGTCACAACTTGCCTCCAACGCAGGGACACTCGTTTAGGATCGTCTAAGAAAATGGTTACCGAGCTTGCGTTCTCAGGAATTTTGAGCAATAAACAGAAATTCAATCCAGATTTCTATAACTGGAACAGAATCAAGGTTCGGTACTGTGATGGATCTTCTTTTACTGGAGACGTTGAAGCCGTTGATCCCGCTACCAATCTGCATTTCAGAGGAGCAAGAGTTTTTCGTGCTATCATCAATAACCTACTTGCCAAGGGAATGAAGAATGCAAAAAACGCTATTCTCTCGGGTTGTTCGGCGGGTGGATTAAGTTCCATTTTACATTGTGATAACTTCAAATCTCTACTTCCTGTTACTACTAAAGTGAAGTGCCTCTCAGATGCAGGATACTTTATCAACGCGAAAGACGTCTCTGGAGCGCAGCACATTGAAGACTTCTACAGCGACGTAGTTGCTACCCATGGTTCTGCAAAGAATTTGCCTATATCATGCACATCAAAAATGAAACCTGAGATGTGTTTCTTTCCTCAAAATGTGGTTCAGCTCATTCAGACTCCAATATTTCTTGTAAATGCAGCCTATGATTCATGGCAGATAAAGAATATACTGGCACCTGGTGTTGCTGATCCACACGGTACTTGGCACGACTGCAAGCTTGACATCAAAAACTGCTCGCCCATTCAGATTCGAATCATGCAAGATTTCAGGGTTCAGTTTTTGAGTGCATTGAATGGCGTTGGAAGTTCTTTATCAAGAGGGCTGTTCATAGATTCTTGCTATGCCCATTGCCAAACCGAAATGCAGGAGACATGGTTACGAGCGGATTCTCCCATGCTGAGTAAGACGCCCATTGCAAAGGCAGTTGGAGACTGGTTTTTCGACAGGAGTCCGTTCCAGAAAATCGACTGTCCTTACCCCTGCAACCCGACTTGCCACAATCGCATTTTTGAAGCGAAAGACAACCTCGAATGA 1230 43.74 MLLGSSCFQKKMASENFGLWLFFIASLQFFLQAQCINVGITYVQDAGIKGAVCLDGSPPAYHFSDGFGSGVDNWLIQLEGGGWCNNVTTCLQRRDTRLGSSKKMVTELAFSGILSNKQKFNPDFYNWNRIKVRYCDGSSFTGDVEAVDPATNLHFRGARVFRAIINNLLAKGMKNAKNAILSGCSAGGLSSILHCDNFKSLLPVTTKVKCLSDAGYFINAKDVSGAQHIEDFYSDVVATHGSAKNLPISCTSKMKPEMCFFPQNVVQLIQTPIFLVNAAYDSWQIKNILAPGVADPHGTWHDCKLDIKNCSPIQIRIMQDFRVQFLSALNGVGSSLSRGLFIDSCYAHCQTEMQETWLRADSPMLSKTPIAKAVGDWFFDRSPFQKIDCPYPCNPTCHNRIFEAKDNLE 409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 30029550 30032576 - CrPI670011_07g014800.1 Cre07g1480 504061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g1480 409 PANTHER NOTUM-RELATED 35 399 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
Cre07g1480 409 Pfam Pectinacetylesterase 32 383 IPR004963 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g2058 Cre-Chr3:37631942 Cre07g1480 Cre-Chr7:30029550 1.10E-126 dispersed
Cre05g1004 Cre-Chr5:9217181 Cre07g1480 Cre-Chr7:30029550 3.30E-101 dispersed
Cre07g1480 Cre-Chr7:30029550 Cre04g0913 Cre-Chr4:27808992 4.60E-110 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g1480 K19882 - csv:101214431 793.882