Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g1486 ATGGCCGGCGGCCAGTCCCGTAAGTGGCTGGTTCTAGTAGCGACCATATGGATTCAGGCATTCACAGGCACGAACTTCGATTTCTCGGCTTACTCTTCCAGATTGAAATCGGTTTTAGCCATTTCTCAGGTTCAGCTTAATTACCTCGCCACCGCCTCCGATCTCGGCAAAGTCTTCGGCTGGTCCTCTGGCTTGGCTCTGCTTCACCTGCCTTTGCCGCTCGTTCTCTTCATCGCCGCTTTTTTGGGACTCATCGGCTACGGCTTCCAATGGCTTCTAATCGCTGATTTCATCTCCTTCCCCTATTTCCTGGTGTTCTTCCTGTGTTTGCTTGCCGGTTGTAGCATTTGTTGGTTCAACACAGTTTGTTTCGTCCTTTGCATTCGAAATTTCTCTGCAAATCGGCCATTGGCGTTATCTCTCACTGTCAGCTTCAATGGCGTCAGTGCAGCTTTCTACACCCTCGCCGGCAACGCCATTAATCCCTCTTCCCCTCCCATTTACCTCCTCCTCAATGCTCTCGTTCCCCTTCTCACCTCCATCGCCGCCTTCCTTCCCGTCCTCCACCAACCGCCACTTCACTCTCTTTCTCTCTCCTCCCACGCCGTCCACCGAGACTCTCTCATTTTTCTCATCTTGAATTTCCTCGCCGTCGCCGTTGGAATCTACCTTCTCCTCTTTGGCTCTGTCACTTCCGCTGATCCCATGATCGCAAGACTCCTCTTCATCGGAGCCATCCTTCTTCTTATCTTGCCTCTCTGTATTCCCGGTGTTGTTTACGCTAATGATTGGTTCCATCGAACCGTTAATTCCAGCTTCAGTCTCGACGGATCTAATTTCATTCTCGTCCACGACGAAGATCTCGAGTTTCACAAAGAGTTGCTCCTCACTCGCGAAACGAGTGGAAGCTTAGGCAATGGCGCATCTCGGTTGTTGTCCGAATCTACTTTGCTAATTGACGGTGAGATTGAATCATCGAAAGGCTGTTTTCGGAAATTGATTGAGATAGATCAATTAGCGATGCTTGGGGAAGAGCATTCGTCGAGTAGATTGGTGAAACGCCTGGATTTTTGGCTGTATTTTATGGCTTACATTTGTGGAGGCACAATCGGTCTCGTTTACAGCAATAACATTGGTCAGATTGCACAATCGCTAGGGCTGAGTTCAAAAACCACAGCGATTGTAACACTGTACTCCTCCTTCTCCTTCTTCGGCCGATTGCTCTCCGCCGTACCGGACTACATTCGAGCGAAATTGTATTTCGCAAGAACAGGATGGCTTTCGATTGCCCTAATTCCAACTCCCATAGCATTCTTCCTGCTATCGGCGTCATCGAGTGCGTTGGCAGTGTACATAGGCACGGCGTTGATAGGTTTGAGCTCGGGATTCATATTCGCAGCGGCAGTTTCGATTACCGCGGAGCTGTTCGGGCCAAATAGCTTAGGCGTTAACCACAACATTTTGATCACAAACATTCCGATCGGATCTCTGCTGTACGGGATGTTTGCAGCGGTGGTGTACGATTCGCAGGGAAGAAGTTCCGGCGATGGGGAGGCAGTTGTGTGCATGGGAAGAAGGTGCTATTTCTTAACATTTGTATTCTGTGGATGCATTTCTGTTATGGGATTGGTTTCGAGTGTGTTACTGTTCTTGAGAACAAGACATGCATATGACCACTTTGAAAGTAGTAGGATTTCTAGTAGTTCAAATCGATTGTATTGA 1722 48.72 MAGGQSRKWLVLVATIWIQAFTGTNFDFSAYSSRLKSVLAISQVQLNYLATASDLGKVFGWSSGLALLHLPLPLVLFIAAFLGLIGYGFQWLLIADFISFPYFLVFFLCLLAGCSICWFNTVCFVLCIRNFSANRPLALSLTVSFNGVSAAFYTLAGNAINPSSPPIYLLLNALVPLLTSIAAFLPVLHQPPLHSLSLSSHAVHRDSLIFLILNFLAVAVGIYLLLFGSVTSADPMIARLLFIGAILLLILPLCIPGVVYANDWFHRTVNSSFSLDGSNFILVHDEDLEFHKELLLTRETSGSLGNGASRLLSESTLLIDGEIESSKGCFRKLIEIDQLAMLGEEHSSSRLVKRLDFWLYFMAYICGGTIGLVYSNNIGQIAQSLGLSSKTTAIVTLYSSFSFFGRLLSAVPDYIRAKLYFARTGWLSIALIPTPIAFFLLSASSSALAVYIGTALIGLSSGFIFAAAVSITAELFGPNSLGVNHNILITNIPIGSLLYGMFAAVVYDSQGRSSGDGEAVVCMGRRCYFLTFVFCGCISVMGLVSSVLLFLRTRHAYDHFESSRISSSSNRLY 573
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 30111729 30118865 + CrPI670011_07g014860.1 Cre07g1486 504067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g1486 573 Gene3D MFS general substrate transporter like domains 350 561 IPR036259 -
Cre07g1486 573 Pfam Nodulin-like 8 256 IPR010658 -
Cre07g1486 573 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 7 559 - GO:0016020(PANTHER)
Cre07g1486 573 SUPERFAMILY MFS general substrate transporter 344 555 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre06g0836 Cre-Chr6:1680175 Cre07g1486 Cre-Chr7:30111729 3.90E-174 dispersed
Cre07g1486 Cre-Chr7:30111729 Cre02g1490 Cre-Chr2:27012904 6.50E-70 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g1486 - - - 0.0