Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre07g1548 | ATGGCTTCCACAAATAATGATTCATTACACAGCTTCTGCACCAGCAGTCAGGATCCACTCAACTGGGGTGTGGCCGCTGACTCCATGAAGGGAAGTCATTTGGATGAGGTCAAGCGTATGGTGGAAGAGTATCGGACGCCTTTTGTTAAGCTTGGAGGCCAGACTCTCACCATTTCTCAAGTCGCTTCCATTGCCACTCGTGACAACGATGTCATCGTAGAATTGGCCGAGTCTGCGAGGGCCGGTGTAAAAGCCAGCAGCGATTGGGTGATGGAGAGCATGAGCAAAGGCACGGATAGTTATGGTGTTACTACTGGCTTTGGTGCCACTTCCCATAGAAGAACCAATCAAGGTGGAGCTCTTCAAAAGGAGTTGATCCGATTCTTGAATTCCGGTATCTTTGGGACTGGCAGTGAGTCGAGTCACACTTTGCCTCATTCTGCCACAAGGGCGGCCATGTTGGTGAGAATCAACACACTCCTACAAGGCTACTCCGGCATTAGATTCGAGATTTTGGAAGCCATTGCTAATCTCTTGAACCACAACGTTACTCCGTGTTTGCCACTTCGAGGAACAATTACAGCTTCTGGAGATTTGGTTCCTTTGTCTTACATTGCAGGGTTGCTCACCGGTCGCCACAATTCAAAAGCGATCGGACCCAATGGAGAACCTCTTGATGCAAAGGCTGCTTTTGAACAAGCTGGCATTGATTCTGGGTTCTTTGAGTTGCAGCCTAAGGAAGGTCTTGCTCTTGTAAATGGCACCGCTGTCGGTTCTGGGTTGGCCTCCATTGTTCTCTTCGAGACAAATATTTTGGCTGTTTTGTCTGAAATTCTATCTGCCATTTTTGCTGAGGTGATGCAAGGAAAGCCTGAATTCACCGACCATTTGACCCATAAGTTGAAGCACCACCCTGGCCAAATTGAAGCTGCTGCAATCATGGAGCACATTTTAGATGGAAGCTCCTACATGAAAACTGCTAAGAAATTGCATGAAATGGATCCTCTCCAAAAGCCCAAACAAGATCGTTATGCTCTTAGAACTTCTCCTCAATGGTTGGGTCCCTTGATTGAAGTGATCCGTTTCTCCACCAAGTCGATCGAGCGGGAAATTAATTCAGTCAATGACAACCCTTTGATTGATGTTTCAAGAAACAAGGCGTTGCATGGAGGTAACTTCCAAGGAACGCCAATTGGAGTTTCCATGGACAACACCCGTTTGGCAATTGCATCGATTGGAAAGCTCATGTTTGCCCAATTTTCAGAACTCGTCAATGATTTCTACAATAACGGTTTGCCTTCTAATCTTTCTGCAAGTAGAAACCCCAGCTTGGATTATGGCTTCAAAGGTGCTGAGATTGCCATGGCCTCATACTGCTCTGAGCTCCAATATCTTGCAAATCCAGTGACGAGTCATGTCCAGAGCGCCGAGCAACACAACCAAGATGTTAACTCTCTTGGTTTAATTTCTTCAAGGAAAACCGCTGAAGCCATCGATATCCTCAAACTCATGTCTTCCACATTTTTAGTTGCTCTTTGCCAAGCAATTGACTTGAGGCATTTGGAGGAAAACTTGAAGAGCACAGTGAAAAACACTGTTAGCCAAGTAGCGAAAAAGGTGTTGACTACATCCTCCAATGGCGCACTTCACCCATCAAGATTTTGTGAGAAAGATCTACTCAAAGTTGTTGACCGAGAATACACTTTTGCATACATCGATGATCCATGCAGTGCTACTTACCCACTTATGCAAAAGTTGAGGCAAGTTCTTGTTGAGCATGCACTTGAAAATGGTGATAACGAAGTCAACGCAAACACTTCAATCTTCCAAAAGATTGGTGCTTTCGAAGAGGAATTAAAGGCAATCTTACCGAAGGAGGTTGAAAATGTAAGGATAGCATATGAGAGTGGGAACTCTAAAATTGAAAATCAAATCAAGGATTGCAGATCTTACCCATTATACAGATTTGTGAGAGAGGAGTTGGGAACAAGCTTGCTAACTGGCGAAAAGGTGATATCTCCTGGAGAAGAGTGTGAGAAGGTATTCACGGCTTTATGTCAAGGAAAAATGATCGACTCTATCTTCGAATGCTTAAAGGAGTGGAATGGAGCACCAATCCCTATTTGCTAA | 2130 | 44.74 | MASTNNDSLHSFCTSSQDPLNWGVAADSMKGSHLDEVKRMVEEYRTPFVKLGGQTLTISQVASIATRDNDVIVELAESARAGVKASSDWVMESMSKGTDSYGVTTGFGATSHRRTNQGGALQKELIRFLNSGIFGTGSESSHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAIANLLNHNVTPCLPLRGTITASGDLVPLSYIAGLLTGRHNSKAIGPNGEPLDAKAAFEQAGIDSGFFELQPKEGLALVNGTAVGSGLASIVLFETNILAVLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKTAKKLHEMDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQAIDLRHLEENLKSTVKNTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDDPCSATYPLMQKLRQVLVEHALENGDNEVNANTSIFQKIGAFEEELKAILPKEVENVRIAYESGNSKIENQIKDCRSYPLYRFVREELGTSLLTGEKVISPGEECEKVFTALCQGKMIDSIFECLKEWNGAPIPIC | 709 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 30908171 | 30910300 | + | CrPI670011_07g015480.1 | Cre07g1548 | 504129 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre07g1548 | 709 | FunFam | Phenylalanine ammonia-lyase | 256 | 560 | - | - | |
Cre07g1548 | 709 | Gene3D | - | 10 | 255 | IPR024083 | - | |
Cre07g1548 | 709 | Gene3D | - | 522 | 643 | IPR023144 | - | |
Cre07g1548 | 709 | FunFam | Phenylalanine ammonia-lyase | 9 | 255 | - | - | |
Cre07g1548 | 709 | CDD | PAL-HAL | 54 | 519 | IPR001106 | - | |
Cre07g1548 | 709 | Pfam | Aromatic amino acid lyase | 56 | 534 | IPR001106 | - | |
Cre07g1548 | 709 | ProSitePatterns | Phenylalanine and histidine ammonia-lyases signature. | 191 | 207 | IPR022313 | GO:0016841(InterPro) | |
Cre07g1548 | 709 | PANTHER | HISTIDINE AMMONIA-LYASE | 15 | 709 | IPR001106 | GO:0016841(PANTHER)|GO:0045548(PANTHER) | |
Cre07g1548 | 709 | SUPERFAMILY | L-aspartase-like | 18 | 709 | IPR008948 | GO:0003824(InterPro) | |
Cre07g1548 | 709 | FunFam | Phenylalanine ammonia-lyase | 522 | 643 | - | - | |
Cre07g1548 | 709 | NCBIfam | phenylalanine ammonia-lyase | 18 | 699 | IPR005922 | GO:0005737(InterPro)|GO:0006559(InterPro)|GO:0016841(InterPro) | |
Cre07g1548 | 709 | Gene3D | Fumarase/aspartase (Central domain) | 256 | 704 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre04g1006 | Cre-Chr4:28673471 | Cre07g1548 | Cre-Chr7:30908171 | 0.00E+00 | dispersed | |
Cre04g1007 | Cre-Chr4:28677317 | Cre07g1548 | Cre-Chr7:30908171 | 8.50E-52 | dispersed | |
Cre07g1548 | Cre-Chr7:30908171 | Cre08g0711 | Cre-Chr8:20130380 | 0.00E+00 | dispersed | |
Cre07g1547 | Cre-Chr7:30903449 | Cre07g1548 | Cre-Chr7:30908171 | 0.00E+00 | tandem | |
Cre07g1548 | Cre-Chr7:30908171 | Cre07g1549 | Cre-Chr7:30913399 | 0.00E+00 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre07g1548 | K10775 | - | csv:116401606 | 1330.47 |