Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g1571 ATGGACACAGAGGAAGCTCCATCGACACCGGTGACGCCGGGGACTCCCGGGGCTCCGCTGTTTGGACGAGTGAAGGATAATCAGCATGGAAGTGAGAATGGTAAAAGATCTCTTCTCAAGAGCTGCATCTCTTTCAATGTTGATGATAATTGGGGCAGTGAAGAAGGAGGCTTATCTAAACTAGTCTCTTCTTGTTCATTGCCGTACCCTCCTGTCTCACTTGCAAGAAAGGTGGGAGCGGAGTTCATAGGTACTTCGATACTCATCTTTGCCGGAACCGCCACGGCCATCGTGAACCAAAAGACGAAAGGAACCGAAACACTGATTGGCCTGGCGGCCTCCACCGGCCTTGCGGTGATGATTGTGATCTTGTCGACGGGTCACATCTCTGGAGCCCATCTGAATCCGGCCATCACCATTGCTTTTGCTGCGTTGAAGCAGTTTCCATGGAAGCATGTGCCAGTGTATATTGGAGCTCAAATGGTGGCTTCTTTGTGTTCTTCTTTTGCATTGAAATGGATCTTTGATCCCATAATGGGAGGAGGAGCCACTGTTCCTTCATGTGGAAATGCCCAAGCTTTTGCTCTTGAGTTTATCATTAGCTTCAACCTCATGTTCGTCATCACTGCTGTCGCTACTGACACTCGGGCTGTGGGAGAATTGGCGGGAATCGCGGTGGGAGCAACCGTTATGCTCAATGTACTCATCGCCGGACAAACAACTGGAGCTTCAATGAATCCAGTAAGAACACTGGGGCCAGCCATTGCTGCAAACAACTTTAGAGCCATTTGGATTTACCTCACAGCTCCCATACTAGGGACATTGTGTGGAGCTGGAATCTACACTGCAGTTAAGTTGCCCGACAAAGATGGCGATTCACGCTTGCCTTCTACTGCAGGAAGCTTTCGAGGATGA 915 49.73 MDTEEAPSTPVTPGTPGAPLFGRVKDNQHGSENGKRSLLKSCISFNVDDNWGSEEGGLSKLVSSCSLPYPPVSLARKVGAEFIGTSILIFAGTATAIVNQKTKGTETLIGLAASTGLAVMIVILSTGHISGAHLNPAITIAFAALKQFPWKHVPVYIGAQMVASLCSSFALKWIFDPIMGGGATVPSCGNAQAFALEFIISFNLMFVITAVATDTRAVGELAGIAVGATVMLNVLIAGQTTGASMNPVRTLGPAIAANNFRAIWIYLTAPILGTLCGAGIYTAVKLPDKDGDSRLPSTAGSFRG 304
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 31176703 31181040 + CrPI670011_07g015710.1 Cre07g1571 504152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g1571 304 Gene3D Glycerol uptake facilitator protein. 69 293 IPR023271 -
Cre07g1571 304 MobiDBLite consensus disorder prediction 1 33 - -
Cre07g1571 304 SUPERFAMILY Aquaporin-like 72 289 IPR023271 -
Cre07g1571 304 FunFam Aquaporin NIP2-1 65 295 - -
Cre07g1571 304 ProSitePatterns MIP family signature. 133 141 IPR022357 -
Cre07g1571 304 PRINTS Major intrinsic protein family signature 196 214 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cre07g1571 304 PRINTS Major intrinsic protein family signature 115 139 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cre07g1571 304 PRINTS Major intrinsic protein family signature 227 249 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cre07g1571 304 PRINTS Major intrinsic protein family signature 264 284 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cre07g1571 304 PRINTS Major intrinsic protein family signature 76 95 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cre07g1571 304 PRINTS Major intrinsic protein family signature 152 171 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cre07g1571 304 PANTHER AQUAPORIN NIP2-1 68 289 IPR034294 -
Cre07g1571 304 Pfam Major intrinsic protein 73 281 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g1571 Cre-Chr7:31176703 Cre09g2392 Cre-Chr9:43321484 5.10E-90 dispersed
Cre07g1571 Cre-Chr7:31176703 Cre04g2013 Cre-Chr4:37457803 1.50E-57 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g1571 K09874 - csv:101207376 576.63