Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre07g1603 | ATGGCCCTTCGCCCTTTCTTCTGCTGTGGAATTGGTTCGGATCGGAAAGAAAGAGGGAAGAAACAGCAAACATGGAGGGTCTTTTCGTTGAAGGAATTACACTCGGCCACAAATAATTTTAATTATGATAACAAGCTTGGAGAAGGAGGATTTGGTAGCGTTTACTGGGGTCAGCTGTGGGATGGATCACAAATAGCAGTTAAAAGGTTGAAGGTCTGGAGCAACAAAGCAGACATGGAATTCTCTGTGGAAGTTGAAATACTGGCCCGAGTTAGGCACAAGAATCTATTGAGTTTACGTGGCTACTGTGCTGAAGGGCAAGAGCGCTTGATCGTGTATGACTACATGCCCAATCTAAGTCTACTCTCCCATCTACATGGACATCACTCATCAGAATGCCACCTTGATTGGAAACGTCGTATGAAAATCGCTATTGGGTCTGCCGAGGGAATTGCCTATCTTCACCACCAAGCAACTCCACATATCATTCATCGAGACATCAAAGCTAGTAATGTTTTGCTGGATCCAGATTTCCAAGCTCGAGTAGCTGACTTTGGATTCGCAAAACTCATCCCCGATGGTGCAACACATGTAACTACAAGAGTCAAGGGCACACTCGGATACCTCGCTCCTGAATATGCTATGTTAGGTAAGGCATCAGAGAGTTGTGACGTATACAGCTTTGGCATTCTCCTGCTTGAGCTTGCTACCGGCAAGAAGCCTCTTGAGAAATTGAGTGCAACAATGAAACGCACAATCATAGATTGGGCACTACCGTTTGTAGTTGAGAAAAAAATTGACGAACTTGCAGACCCGAAGCTAAATGGAGACTATAACGCAGACGAACTAAAGAGAGTCGTCCTTGTTGCGCTCTGTTGTTCCCATTCACAACCTGAGAAACGACCGACCATGCTCGAGGTGGTTGAGCTGCTAAAAGGAGAATCAAAAGAGAAGCTAGCCAAATTAGAAGATGATGAGCTGTTCAAGAGCCATCAAGTAGCTGCACAAACTACAGAAATACAAGCTGGTGAAGATAGCTCAGACTTCATATCAGAAGAAAAGGATTCAAAAGAGAAGGAGAAAGAGAATTCATCACAAAACCCCACATGA | 1110 | 44.41 | MALRPFFCCGIGSDRKERGKKQQTWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKADMEFSVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGHHSSECHLDWKRRMKIAIGSAEGIAYLHHQATPHIIHRDIKASNVLLDPDFQARVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELATGKKPLEKLSATMKRTIIDWALPFVVEKKIDELADPKLNGDYNADELKRVVLVALCCSHSQPEKRPTMLEVVELLKGESKEKLAKLEDDELFKSHQVAAQTTEIQAGEDSSDFISEEKDSKEKEKENSSQNPT | 369 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 31509250 | 31512227 | - | CrPI670011_07g016030.1 | Cre07g1603 | 504184 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre07g1603 | 369 | Gene3D | Transferase(Phosphotransferase) domain 1 | 116 | 329 | - | - | |
Cre07g1603 | 369 | CDD | STKc_IRAK | 46 | 313 | - | - | |
Cre07g1603 | 369 | FunFam | PTI1-like tyrosine-protein kinase At3g15890 | 12 | 115 | - | - | |
Cre07g1603 | 369 | SUPERFAMILY | Protein kinase-like (PK-like) | 23 | 311 | IPR011009 | - | |
Cre07g1603 | 369 | ProSiteProfiles | Protein kinase domain profile. | 40 | 319 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre07g1603 | 369 | SMART | serkin_6 | 40 | 311 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre07g1603 | 369 | MobiDBLite | consensus disorder prediction | 336 | 369 | - | - | |
Cre07g1603 | 369 | Pfam | Protein kinase domain | 41 | 309 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre07g1603 | 369 | PANTHER | OS01G0750732 PROTEIN | 22 | 349 | IPR050885 | - | |
Cre07g1603 | 369 | Coils | Coil | 305 | 325 | - | - | |
Cre07g1603 | 369 | ProSitePatterns | Protein kinases ATP-binding region signature. | 46 | 68 | IPR017441 | GO:0005524(InterPro) | |
Cre07g1603 | 369 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 162 | 174 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre07g1603 | 369 | MobiDBLite | consensus disorder prediction | 347 | 369 | - | - | |
Cre07g1603 | 369 | Gene3D | Phosphorylase Kinase; domain 1 | 12 | 115 | - | - | |
Cre07g1603 | 369 | FunFam | PTI1-like tyrosine-protein kinase At3g15890 | 116 | 327 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre03g0710 | Cre-Chr3:5972119 | Cre07g1603 | Cre-Chr7:31509250 | 9.80E-56 | dispersed | |
Cre06g2173 | Cre-Chr6:29568336 | Cre07g1603 | Cre-Chr7:31509250 | 7.80E-115 | dispersed | |
Cre07g1603 | Cre-Chr7:31509250 | Cre11g0731 | Cre-Chr11:4424489 | 4.20E-78 | dispersed | |
Cre10g2340 | Cre-Chr10:37577691 | Cre07g1603 | Cre-Chr7:31509250 | 4.80E-64 | dispersed | |
Cre10g2341 | Cre-Chr10:37582573 | Cre07g1603 | Cre-Chr7:31509250 | 4.00E-66 | dispersed | |
Cre07g1603 | Cre-Chr7:31509250 | Cre05g0950 | Cre-Chr5:8750622 | 1.60E-114 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64279 | PF00069 | Pkinase | 5.60E-45 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre07g1603 | - | - | - | 0.0 |