Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g1603 ATGGCCCTTCGCCCTTTCTTCTGCTGTGGAATTGGTTCGGATCGGAAAGAAAGAGGGAAGAAACAGCAAACATGGAGGGTCTTTTCGTTGAAGGAATTACACTCGGCCACAAATAATTTTAATTATGATAACAAGCTTGGAGAAGGAGGATTTGGTAGCGTTTACTGGGGTCAGCTGTGGGATGGATCACAAATAGCAGTTAAAAGGTTGAAGGTCTGGAGCAACAAAGCAGACATGGAATTCTCTGTGGAAGTTGAAATACTGGCCCGAGTTAGGCACAAGAATCTATTGAGTTTACGTGGCTACTGTGCTGAAGGGCAAGAGCGCTTGATCGTGTATGACTACATGCCCAATCTAAGTCTACTCTCCCATCTACATGGACATCACTCATCAGAATGCCACCTTGATTGGAAACGTCGTATGAAAATCGCTATTGGGTCTGCCGAGGGAATTGCCTATCTTCACCACCAAGCAACTCCACATATCATTCATCGAGACATCAAAGCTAGTAATGTTTTGCTGGATCCAGATTTCCAAGCTCGAGTAGCTGACTTTGGATTCGCAAAACTCATCCCCGATGGTGCAACACATGTAACTACAAGAGTCAAGGGCACACTCGGATACCTCGCTCCTGAATATGCTATGTTAGGTAAGGCATCAGAGAGTTGTGACGTATACAGCTTTGGCATTCTCCTGCTTGAGCTTGCTACCGGCAAGAAGCCTCTTGAGAAATTGAGTGCAACAATGAAACGCACAATCATAGATTGGGCACTACCGTTTGTAGTTGAGAAAAAAATTGACGAACTTGCAGACCCGAAGCTAAATGGAGACTATAACGCAGACGAACTAAAGAGAGTCGTCCTTGTTGCGCTCTGTTGTTCCCATTCACAACCTGAGAAACGACCGACCATGCTCGAGGTGGTTGAGCTGCTAAAAGGAGAATCAAAAGAGAAGCTAGCCAAATTAGAAGATGATGAGCTGTTCAAGAGCCATCAAGTAGCTGCACAAACTACAGAAATACAAGCTGGTGAAGATAGCTCAGACTTCATATCAGAAGAAAAGGATTCAAAAGAGAAGGAGAAAGAGAATTCATCACAAAACCCCACATGA 1110 44.41 MALRPFFCCGIGSDRKERGKKQQTWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKADMEFSVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGHHSSECHLDWKRRMKIAIGSAEGIAYLHHQATPHIIHRDIKASNVLLDPDFQARVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELATGKKPLEKLSATMKRTIIDWALPFVVEKKIDELADPKLNGDYNADELKRVVLVALCCSHSQPEKRPTMLEVVELLKGESKEKLAKLEDDELFKSHQVAAQTTEIQAGEDSSDFISEEKDSKEKEKENSSQNPT 369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 31509250 31512227 - CrPI670011_07g016030.1 Cre07g1603 504184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g1603 369 Gene3D Transferase(Phosphotransferase) domain 1 116 329 - -
Cre07g1603 369 CDD STKc_IRAK 46 313 - -
Cre07g1603 369 FunFam PTI1-like tyrosine-protein kinase At3g15890 12 115 - -
Cre07g1603 369 SUPERFAMILY Protein kinase-like (PK-like) 23 311 IPR011009 -
Cre07g1603 369 ProSiteProfiles Protein kinase domain profile. 40 319 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre07g1603 369 SMART serkin_6 40 311 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre07g1603 369 MobiDBLite consensus disorder prediction 336 369 - -
Cre07g1603 369 Pfam Protein kinase domain 41 309 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre07g1603 369 PANTHER OS01G0750732 PROTEIN 22 349 IPR050885 -
Cre07g1603 369 Coils Coil 305 325 - -
Cre07g1603 369 ProSitePatterns Protein kinases ATP-binding region signature. 46 68 IPR017441 GO:0005524(InterPro)
Cre07g1603 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre07g1603 369 MobiDBLite consensus disorder prediction 347 369 - -
Cre07g1603 369 Gene3D Phosphorylase Kinase; domain 1 12 115 - -
Cre07g1603 369 FunFam PTI1-like tyrosine-protein kinase At3g15890 116 327 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0710 Cre-Chr3:5972119 Cre07g1603 Cre-Chr7:31509250 9.80E-56 dispersed
Cre06g2173 Cre-Chr6:29568336 Cre07g1603 Cre-Chr7:31509250 7.80E-115 dispersed
Cre07g1603 Cre-Chr7:31509250 Cre11g0731 Cre-Chr11:4424489 4.20E-78 dispersed
Cre10g2340 Cre-Chr10:37577691 Cre07g1603 Cre-Chr7:31509250 4.80E-64 dispersed
Cre10g2341 Cre-Chr10:37582573 Cre07g1603 Cre-Chr7:31509250 4.00E-66 dispersed
Cre07g1603 Cre-Chr7:31509250 Cre05g0950 Cre-Chr5:8750622 1.60E-114 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64279 PF00069 Pkinase 5.60E-45 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g1603 - - - 0.0