Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g1645 ATGGAGAATCTAAGGGCTCCATTTAGGGGTATTGTGGGTGATATCAGAGGAAGAGCGGCCTGTTATAAGCAAGATTGGGTTGATGGTCGACTTTCAGGGATTGGAATTTTGGCCCCAACTGCTTACATTTTTTTCGCTTCTGCACTTCCTGTCATTGCTTTTGGTGAGCAATTGAGCCGAGATACAGATGGAAGCTTGAGCACAGTAGAAACATTGGCTTCCACAGCCATTTGTGGCATCCTTCATTCCATTCTTGGCGGGCAACCTCTCCTAGTTGTAGGAGTTGCAGAACCTACAATTATTATGTATACTTATTTGTACAATTTTTGCAAGAAAAGGGAAGATATAGGGGGAGACCTCTTCTTGGCTTGGGCAGGATGGGTTTGTGTCTGGACAGCCCTCTTGCTGTTTCTTCTTGCTATATTCAACGCTTCCAGTTTAATCAACAAATTTACAAGGATTGCAGGGGAACTTTTTGGCATGTTAATCTCCGTTTTGTTCATTCAAGAAGCTATTAAGGGAGTGGTGAGCGAATTTGAAGTTCCCCAGACCGAGAACACAAGTCTAGAGAAGTATCAATTTCATTGGCTTTACACGAATGGATTACTGGGAATCATCTTTACTTTTGGCCTTCTCTATACTGCCTTGAAGAGCAGAAAGGCAAGATCGTGGTTGTATGGGACAGGCTGGCTAAGGAGTTTCATTGCAGACTATGGAGTTCCTCTGATGGTTGTAGTATGGACTGCACTATCATTTAGTGTACCAAGCAAAGTCCCGTTTGGAGTTCCTAGAAGACTTCAAAGTCCTTTGGCATGGCAATCTACTTCTCTGCACCATTGGACCGTTGTCAAGGACATGGGGAAGATACCTCCTGCGTACATCTTCATGGCCTTTATTCCTGCTGTGATGATTGCAGGACTTTATTTTTTTGATCATAGTGTCGCTTCTCAGATGGCACAACAAAAGGAGTTTAATCTCAAGAACCCTCCTGCTTACCACTATGACATCCTGTTGCTGGGATTTATGACATTGGTTTGTGGGTTAATCGGGCTTCCTCCTTCAAATGGGGTCTTGCCACAGTCCCCCATGCACACCAAGTGTCTTGCAACTCTCAGGAGGCGTTTGATGCGAAGGAAGATGGTAGAAAGTGCAAAGGAAAGCATAAAAAGGAAAGCTAGTGATTCCGAAATCTATGGCCAAATGCAAGCTGTGTTCTTAGAAATGGAGAGCAGCCCAATTACGACATCAGTAGTCAAAGAACTGGAAGATTTGAAGGAGGCAGTCATGAAAGGTGAAAGTAAGGATGAAAATGCAAATGTTACATTTGACCCAGAGAAGCATATTGATGCTTATCTTCCTGTTCGAGTGAACGAGCAAAGATTGAGCAATCTACTGCAATCACTTCTGGTGGCAGCATCAGTATTTGCTTTACCAGCAATAAAGAAGATACCAACATCAGTTCTCTGGGGGTACTTCGCGTATATGGCCATTGACAGTCTACCTGGAAACCAATTTTGGGAAAGGATTTTACTTCTCTTTGTAATGCCTAGTCGACGTTACAAGGTCCTAGAAGGTTTTCATGCTTCCTTCGTGGAGTCTGTTCCATTCAAATACATAGCCGCATTCACTCTATTTCAATTTGTATATTTTCTCATTTGTTTTGGAGTGACTTGGATCCCCATAGCTGGAGTCTTGTTTCCTTTGCCTTTCTTCCTTCTCATCGGCATCAGACATCGCATCCTTCCCAAGCTACTCCAACCTCATTATTTGCAGGAGCTCGATGCGGTTGAGTACGAAGAACTAACCGGTACCTCAATTCTCTCGCTTAGCTTGTCTATCAAGGAAAAGAATACCACTCGTATAGTTGATAATGAAGATGAAGTTGAAATATGTGATGCTGAAATACTTGATGAGTTGACAACCCATAGAGGGGAGTTGAAAGTTAGAACTAAAAGCTTCAACGAGGATAGACATAGTCAGATTCATCCTGACCAAGGCATTGGAAATGACAAATACTAA 2019 42.84 MENLRAPFRGIVGDIRGRAACYKQDWVDGRLSGIGILAPTAYIFFASALPVIAFGEQLSRDTDGSLSTVETLASTAICGILHSILGGQPLLVVGVAEPTIIMYTYLYNFCKKREDIGGDLFLAWAGWVCVWTALLLFLLAIFNASSLINKFTRIAGELFGMLISVLFIQEAIKGVVSEFEVPQTENTSLEKYQFHWLYTNGLLGIIFTFGLLYTALKSRKARSWLYGTGWLRSFIADYGVPLMVVVWTALSFSVPSKVPFGVPRRLQSPLAWQSTSLHHWTVVKDMGKIPPAYIFMAFIPAVMIAGLYFFDHSVASQMAQQKEFNLKNPPAYHYDILLLGFMTLVCGLIGLPPSNGVLPQSPMHTKCLATLRRRLMRRKMVESAKESIKRKASDSEIYGQMQAVFLEMESSPITTSVVKELEDLKEAVMKGESKDENANVTFDPEKHIDAYLPVRVNEQRLSNLLQSLLVAASVFALPAIKKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVMPSRRYKVLEGFHASFVESVPFKYIAAFTLFQFVYFLICFGVTWIPIAGVLFPLPFFLLIGIRHRILPKLLQPHYLQELDAVEYEELTGTSILSLSLSIKEKNTTRIVDNEDEVEICDAEILDELTTHRGELKVRTKSFNEDRHSQIHPDQGIGNDKY 672
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 31889726 31893840 - CrPI670011_07g016450.1 Cre07g1645 504226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g1645 672 PANTHER ANION EXCHANGE PROTEIN 4 643 IPR003020 GO:0005452(InterPro)|GO:0005886(PANTHER)|GO:0006820(InterPro)|GO:0016020(InterPro)|GO:0022857(PANTHER)|GO:0050801(PANTHER)|GO:0055085(PANTHER)
Cre07g1645 672 Gene3D Helical hairpin bin 18 60 - -
Cre07g1645 672 Pfam HCO3- transporter integral membrane domain 196 373 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Cre07g1645 672 Pfam HCO3- transporter integral membrane domain 454 596 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Cre07g1645 672 Pfam HCO3- transporter integral membrane domain 7 189 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g1263 Cre-Chr1:25832419 Cre07g1645 Cre-Chr7:31889726 3.60E-219 transposed
Cre09g2018 Cre-Chr9:39283097 Cre07g1645 Cre-Chr7:31889726 1.40E-300 transposed
Cre10g1327 Cre-Chr10:26747426 Cre07g1645 Cre-Chr7:31889726 1.70E-216 transposed
Cre07g1645 Cre-Chr7:31889726 Cre08g1251 Cre-Chr8:25700403 6.70E-276 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g1645 K24194 - csv:101210964 1230.7