Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g1694 ATGTTTTGGTCAATGAATCCTGTACGAATTCGCAGTTTGTTCTTCCTTCTATACTTCGCTGTTCTTCTTCAAGATCATTCCCTCTGTTCTTCTTATCCCACGCCCTTGAATTGTACGGACACAACCCGTTTATGTACCTCGTTTTTGGCCTTCAAGCCTCAGCCAAATCAAACACTTTCTGTGATCCAGAGCATGTTCGACGTATTGCCTGAAGATGTAACTGTGGAAGGCAATGGTCAGGACTATGTCTTCATCAGGAAGAACTGTTCCTGTGCCTCTGGATTGAAGAAATACATAACCAACACCACTTTTACCATCAAATCCAATCACGGTCATGTATATGATATAGTCATGGAAGCGTATTATGGGCTTGCGCTGTTGCCCAACACAACCCGAATGGCGAGGAACGGCGCTGTTGTGTCTTTGAGATTGTTTTGTGCTTGTTCAAGCGGGTTGTGGAACTATTTGATGAGCTATGTGATGAGAGATGGTGACACCATAGAGTCTTTGGCTAGCCGATTTGGGGTTAGTATGGATAGCATTGAGTCGGTGAATGGAATTGAAAATCCCGGCAATGTCACTGTGGGTGCTTTGTATTATGTTCCCTTGAATTCGGTTCCTGGCGATCCTTATCCGTTGGAGACAGACATTTCTCCTGCTCCTACTCCAGCTCCTTCCTATACTCAGAACAATTTCTCAGATAATGCTCAGAACCCCAAGCGTCATCCTCCATATATATGGATTGTTGGAAGTTTGGGAATTATTCTTGTTCTGATTTTGGTAGGCATAGTAGGTTATGCTTGCTTCAGGTGGTTGAAGTGCTTTTCTAGATCAAGGAGTAGCCACTCCAAAGATCCCGGTGGCAAGGTTTCCCACAAGTTCCATATTCTTGGGAAGTCAAGTTTCTGCTGTGCTTCAGGAAGGTATATTTGCTGCAGTTCTGCTGATTGGAAGCAAGCCAATGGGGAATCTACCGACAACCAGAGTGCAATTCCAAAAGCTATCGAGAGTAATGTATTTGATGTAGACAAACCTGTGGTTTTTTCATGCGAAGAAATTTTTTCCTCAACTGATAGTTTCTCTGATTCAAGTCTACTTGGCCATGGAACTTATGGTTCAGTGTATTATGGCATCCTGCGTGACCAGGAAGTTGCTATAAAAAGGATGACTGCAACAAAAACTAAAGAGTTTATGGCAGAGATGAAAGTCCTCTGCAAGGTTCATCATGCTAATCTGGTAGAATTGATTGGTTATGCAGCCAGTGAGGAGGAGCTTTTTCTTATTTATGAATATGCTCAAAAAGGTCCCCTCAAAAACCATTTGCATGATCCTCTGAACAAGGGTCATACACCGCTATCTTGGATTATGAGACTCCAAATTGCTTTGGACGCTGCGAGGGGTCTTGAATACATTCACGAGCATACTAAAACTCATTATGTTCATAGAGATATCAAGACAAGCAACATCTTACTTGATGGTTCTTTTAGGGCAAAGATTTCTGACTTTGGGTTGGCCAAACTTGTTGGAAAAACAAATGAGGGTGAAGCTACAGTAACGAAAGTTGTTGGCACATACGGCTATTTGGCTCCTGAATATTTGAGTAACGGTCTTGCGACAACCAAAAGTGATGTGTATGCTTACGGTGTCGTTCTTTTTGAGCTTATATCTGGAAAGGAGGCAATTATACGAACTGAGGGAACAACTATGAAAAATCCTGAAAGACGTTCACTGGCATCCATTATGTTAGCTGTTCTTCGGAATGCACCTGATCCTATGAATATGGCAAGTCTAAAAGATCAAGTTGATCCAAGTATGATGGATTTGTATCCTCATGATTGTCTATTTAAGGTGGCCATGTTGGCAAAGCAGTGTGTGGATGAGGATTCAATCTTACGACCCGACATGAAGCAAGTCGTAATATCCTTATCACAGATCCTACTCTCTTCGATTGAGTGGGAAGCGACTCTAGCTGGTAACAGCCAAGTTTTTAGTGGTCTTGTCCAAGGAAGATAG 2013 42.42 MFWSMNPVRIRSLFFLLYFAVLLQDHSLCSSYPTPLNCTDTTRLCTSFLAFKPQPNQTLSVIQSMFDVLPEDVTVEGNGQDYVFIRKNCSCASGLKKYITNTTFTIKSNHGHVYDIVMEAYYGLALLPNTTRMARNGAVVSLRLFCACSSGLWNYLMSYVMRDGDTIESLASRFGVSMDSIESVNGIENPGNVTVGALYYVPLNSVPGDPYPLETDISPAPTPAPSYTQNNFSDNAQNPKRHPPYIWIVGSLGIILVLILVGIVGYACFRWLKCFSRSRSSHSKDPGGKVSHKFHILGKSSFCCASGRYICCSSADWKQANGESTDNQSAIPKAIESNVFDVDKPVVFSCEEIFSSTDSFSDSSLLGHGTYGSVYYGILRDQEVAIKRMTATKTKEFMAEMKVLCKVHHANLVELIGYAASEEELFLIYEYAQKGPLKNHLHDPLNKGHTPLSWIMRLQIALDAARGLEYIHEHTKTHYVHRDIKTSNILLDGSFRAKISDFGLAKLVGKTNEGEATVTKVVGTYGYLAPEYLSNGLATTKSDVYAYGVVLFELISGKEAIIRTEGTTMKNPERRSLASIMLAVLRNAPDPMNMASLKDQVDPSMMDLYPHDCLFKVAMLAKQCVDEDSILRPDMKQVVISLSQILLSSIEWEATLAGNSQVFSGLVQGR 670
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 32374771 32379242 - CrPI670011_07g016940.1 Cre07g1694 504275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g1694 670 Gene3D LysM domain 156 202 IPR036779 -
Cre07g1694 670 FunFam Kinase family protein 335 431 - -
Cre07g1694 670 SUPERFAMILY Protein kinase-like (PK-like) 342 642 IPR011009 -
Cre07g1694 670 ProSitePatterns Protein kinases ATP-binding region signature. 366 387 IPR017441 GO:0005524(InterPro)
Cre07g1694 670 SMART serkin_6 360 647 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre07g1694 670 SUPERFAMILY LysM domain 157 202 IPR036779 -
Cre07g1694 670 ProSiteProfiles LysM domain profile. 157 201 IPR018392 -
Cre07g1694 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 479 491 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre07g1694 670 Gene3D Phosphorylase Kinase; domain 1 332 431 - -
Cre07g1694 670 Pfam Protein tyrosine and serine/threonine kinase 365 640 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre07g1694 670 Gene3D Transferase(Phosphotransferase) domain 1 433 656 - -
Cre07g1694 670 FunFam PTI1-like tyrosine-protein kinase 3 432 656 - -
Cre07g1694 670 Pfam LysM domain 161 196 IPR018392 -
Cre07g1694 670 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 28 659 IPR044812 GO:0019199(InterPro)|GO:0045087(InterPro)
Cre07g1694 670 ProSiteProfiles Protein kinase domain profile. 360 647 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre07g1694 670 SMART LysM_2 158 202 IPR018392 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g0547 Cre-Chr2:2571349 Cre07g1694 Cre-Chr7:32374771 3.90E-79 dispersed
Cre05g0577 Cre-Chr5:5092333 Cre07g1694 Cre-Chr7:32374771 1.80E-58 dispersed
Cre05g2287 Cre-Chr5:34464326 Cre07g1694 Cre-Chr7:32374771 1.10E-37 dispersed
Cre05g2726 Cre-Chr5:38124533 Cre07g1694 Cre-Chr7:32374771 4.70E-98 dispersed
Cre07g1694 Cre-Chr7:32374771 Cre05g2494 Cre-Chr5:36345912 1.40E-55 dispersed
Cre07g1692 Cre-Chr7:32371112 Cre07g1694 Cre-Chr7:32374771 2.20E-23 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64281 PF07714 PK_Tyr_Ser-Thr 1.30E-48 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g1694 - - - 0.0