Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g1707 ATGGCAACTCTCCAATTCTTCCTTCTCATTTTTGTTTCCAGTTTCGCTCTCTTTCATTTCGTCTCTGCAGAGAATCCTTCAGGTTTCATCAGTTTAGACTGTGGACTTCCGGCGAACTCCACATACACAGAGCCAAACACCGGAATAATCTACGAATCCGATGCGGCGTTCATAAATTCTGGTCAAATCCACAACGTTTCCGCTGATAACATAAAGAATGGTTTGAAACAGCCGATGTGGAGTCTGAGGAGCTTTCCGGAAGGAATTAGGAATTGTTACAAATTGAAAGTGAGGAACGGGACGAAGTATTTGATTCGAGCGGCTTTTTGGTACGGAAATTACGATGGTAAAAGGAATTCGCCTGGATTTGATCTGTATTTCGGAGCAAATTTCTGGGACTCGGTTGCATTTGAAGGAAATTTTACAGTGAGGAAGGAGATTGTGCATATAGTTTCATCAAGTGATGTGCAAATTTGTGTCGTGAATGTTGGAACTGGAATTCCATTCATTTCGGCTCTGGAATTGAGGCCTCTAAAAGACTCTGTTTACGAGACTGGATCTCTGACATTAGCTAATTTCCTACGCCTCGATTTCGGCTCCCTTGATAATCAAACTATCAGGTATCAAGACGACGTCTACGATCGAATCTGGGATCCACCAGTTCCCATTCGAGGATGGACAACCATAAACACTTCGGAGAAAGTTTCCGTGGACGATCCGCTCTTCTTCCAACCGGCTCCGGCGGTCATGAACACGGCGGCGACACCGAGTAACGAAAGCGCTCCGATGGCGTTCACCTGGCTGCCACCGGATTCGACGACGGCGTTTTTCGTGTACATGTACTTTGCGGAGCTGAAGGTGCTTGGAGCGAATGAGTCGAGAGTGTTCGACGTATTTCTGAACGGAAAACGATGGATTAATGAATCGCTTTCTCCCAGCTATTTAGCGGAATTGGCGTTTTACAGTACCACGCCTCTGACCGGCGGAACCTACCAGATCTCCTTCGTCAGAACTCCCAATTCAACTCTTCCTCCCATTCTCAATGCCCTTGAGATTTATCGAGTTCTTAATTTATCGCTATCCGAGACCAGTGGGCAAGATGTTGTCGCCATTGAAAACATCAAGGCAATTTATGGAGTTAAAAGAAACTGGCAAGGAGATCCCTGTGCCCCAAAGGACTTCATTTGGGAAGGAGTCAACTGTAGCTTTTTGAATTCTGAGCCTCCCAGAATCATATCCTTGGATTTGTCCTCAAGTGGACTGACAGGGGAAATACCTCGAGAGATAGCAAATCTTAAAATGCTGGAGTCTTTAGATCTATCAAACAATAATTTGAGTGGACCAGTGCCTGATTTTCTCACTCAATTGCCATCCTTGCGAGTTCTAAACTTGGAAAGAAACAAGCTTTCAGGACTAATTCCGGCCCAGCTCGTAGAGAAGTCCAATAATGGCTCTCTGACATTAAGATTTGGTGATAATCCAAATCTGTTTACTACGCCTGAAAGGAGAAAGAAGCAAAGCAATGTTGTTGTTCCTGTAGTAGCATCAGTTGTTGCATTTCTTCTGCTTTCGTTCTTAATTGCAGCGGCTATCTTTTGGAAGACAAAAAGAAGAAAATCAAAAGGAGCCGAAATTAGAGTGGTGAAACAAACTGTTGATCAATCTCAAAATTGGGACACAGCCAAGAGATGTTATTCATACTCAGATGTCCTAAGAATGACAAACAATTTCGAGCGTATGCTTGGAGAAGGCGGCTTTGGAAGAGTTTACTATGGAAAAATTGAGAACGCTGAAGTAGCTGTAAAAATGCTATCTCCTCAATCAGTTCAAGGCTATCAACAATTTCAAGCAGAGGTTGAGCTTCTTATGAGGGTTCACCATAGAAACTTGACTGGTCTTGTTGGGTATTGCAATGAACCAGCCTACAAAGGACTTATCTACGAGTACATGGCCAGAGGGAACTTAGGATCTCTCATGTCAGATGGCAAGTCAGCTTTGTTGAACTGGGAAGTCAGACTTCATATAGCAGTGGATGCAGCACAAGGATTGCAATACTTGCATTCTGGTATAAAGCCAGCTATTGTACATAGAGATGTAAAATCTTCCAATATCTTATTGGATGACAACTTTCAAGCAAAAGTATCTGATTTTGGCTTGTCGAGAATTTTTCCCGTCGACGATGGTGCCACCCATGTGACAACCAATGTGGTTGGCACTCCTGGTTACCTCGACCCTGAATACTACACATCTTATAGATTAAACGAAAAAAGCGACGTGTATGGCTTCGGAATTGTTCTTCTAGAAATCATAACTGGGAGACCAGTTTTGACAAAGACTCAAGACAAGGTAACTCACATCTATCAATGGGTTGACTCAATGGTTTCTCAAGGTGATATCAGCTCCATCATCGATCCGGAATTGAAAGAAGATTTCGAGGTGAACACCATTTGGAAGGCGGTTGAAATAGCGATGTCGTGCGCATCTCCCATGTCTACAAATAGACCAACTATGAGCCAAGTTGTGATACAATTGAATGAATGTTTGAATATGGAGTTAGCTCACAGTAATAACAATCATCAACCTGAATCTGTAGTTGAAGATCATGTTTCTCTGTTTGGTCCAGAAGCAAGGTAG 2634 43.13 MATLQFFLLIFVSSFALFHFVSAENPSGFISLDCGLPANSTYTEPNTGIIYESDAAFINSGQIHNVSADNIKNGLKQPMWSLRSFPEGIRNCYKLKVRNGTKYLIRAAFWYGNYDGKRNSPGFDLYFGANFWDSVAFEGNFTVRKEIVHIVSSSDVQICVVNVGTGIPFISALELRPLKDSVYETGSLTLANFLRLDFGSLDNQTIRYQDDVYDRIWDPPVPIRGWTTINTSEKVSVDDPLFFQPAPAVMNTAATPSNESAPMAFTWLPPDSTTAFFVYMYFAELKVLGANESRVFDVFLNGKRWINESLSPSYLAELAFYSTTPLTGGTYQISFVRTPNSTLPPILNALEIYRVLNLSLSETSGQDVVAIENIKAIYGVKRNWQGDPCAPKDFIWEGVNCSFLNSEPPRIISLDLSSSGLTGEIPREIANLKMLESLDLSNNNLSGPVPDFLTQLPSLRVLNLERNKLSGLIPAQLVEKSNNGSLTLRFGDNPNLFTTPERRKKQSNVVVPVVASVVAFLLLSFLIAAAIFWKTKRRKSKGAEIRVVKQTVDQSQNWDTAKRCYSYSDVLRMTNNFERMLGEGGFGRVYYGKIENAEVAVKMLSPQSVQGYQQFQAEVELLMRVHHRNLTGLVGYCNEPAYKGLIYEYMARGNLGSLMSDGKSALLNWEVRLHIAVDAAQGLQYLHSGIKPAIVHRDVKSSNILLDDNFQAKVSDFGLSRIFPVDDGATHVTTNVVGTPGYLDPEYYTSYRLNEKSDVYGFGIVLLEIITGRPVLTKTQDKVTHIYQWVDSMVSQGDISSIIDPELKEDFEVNTIWKAVEIAMSCASPMSTNRPTMSQVVIQLNECLNMELAHSNNNHQPESVVEDHVSLFGPEAR 877
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 32520858 32527389 + CrPI670011_07g017070.1 Cre07g1707 504288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g1707 877 ProSiteProfiles Protein kinase domain profile. 575 848 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre07g1707 877 Gene3D Ribonuclease Inhibitor 369 488 IPR032675 -
Cre07g1707 877 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 650 857 - -
Cre07g1707 877 Gene3D Phosphorylase Kinase; domain 1 547 649 - -
Cre07g1707 877 ProSitePatterns Protein kinases ATP-binding region signature. 581 602 IPR017441 GO:0005524(InterPro)
Cre07g1707 877 PANTHER OS07G0107800 PROTEIN-RELATED 23 852 - -
Cre07g1707 877 Gene3D Transferase(Phosphotransferase) domain 1 650 870 - -
Cre07g1707 877 ProSitePatterns Serine/Threonine protein kinases active-site signature. 694 706 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre07g1707 877 Pfam Malectin-like domain 32 355 IPR024788 -
Cre07g1707 877 CDD STKc_IRAK 581 846 - -
Cre07g1707 877 Pfam Leucine rich repeat 413 469 IPR001611 GO:0005515(InterPro)
Cre07g1707 877 Pfam Protein tyrosine and serine/threonine kinase 577 843 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre07g1707 877 FunFam Leucine-rich repeat receptor-like protein kinase 553 649 - -
Cre07g1707 877 FunFam Leucine-rich repeat receptor-like kinase 366 499 - -
Cre07g1707 877 PRINTS Leucine-rich repeat signature 435 448 - -
Cre07g1707 877 PRINTS Leucine-rich repeat signature 456 469 - -
Cre07g1707 877 Gene3D - 193 355 - -
Cre07g1707 877 SUPERFAMILY L domain-like 395 480 - -
Cre07g1707 877 SUPERFAMILY Protein kinase-like (PK-like) 559 844 IPR011009 -
Cre07g1707 877 SMART serkin_6 575 848 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g2786 Cre-Chr5:38597823 Cre07g1707 Cre-Chr7:32520858 9.70E-116 dispersed
Cre07g1707 Cre-Chr7:32520858 Cre11g2082 Cre-Chr11:32599665 3.20E-201 dispersed
Cre07g1706 Cre-Chr7:32512141 Cre07g1707 Cre-Chr7:32520858 2.60E-39 tandem
Cre07g1707 Cre-Chr7:32520858 Cre07g1708 Cre-Chr7:32531429 3.20E-201 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64283 PF12819 Malectin_like 1.80E-111 CL0202 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g1707 - - - 0.0