Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g1746 ATGATGGAAGAGATGTCTCCTGCTGTTTCTTTGACCCTTAGTTTGGGTAATCCAAAGTCTGATAGCTCAGTAAATCCTGGTCATGTCGAATTCACACGGCTAAAGTTAGTGACGGACACAGTAAATTTATTCACTGCATCGTCCCCTGAGTCGGGTTCTATTGGTAATGGTAGTTGCCATGATTTTAATGGTATAGTCGACAGCATAACTGTGTCACAACCGACTGATAATGGTCAAGGTATTGACAGTTTTTGGGGGTTGTTACCGAAGAATAGCACGAATTTGACCGTAGATAAGGAAGGTGCATCCTTAGCTACTCTGGATGACCCTGATGAAATGATAGACGATGGGTTGTTTGCTATTGATGGCGGTTCAAGTATTAATGTGCAAGAAGTTGTCAAAATTGGAGATGTTGCTAATGGTCATATTGTTGCAAAGGCTATCATCTTGGTGGAATCAGGGAAGATGCCTACTAGTGAACTTATTGTGGCGACAGTAAGCCCAGATTTAGAAGTATCTGCATCGTCAGAGCTAAACGTCCCTGCAGTAGTTTTCCAATCGAAAGGGGGGGATAGTGTTCATAAAGGCATTCGTAGTGTCTTTGAACGCGATTGTATCCCCCTTTGGGGGTCCGTATCAATTTGTGGTAGAAGACCAGAAATGGAAGATGCAATTGCTGCCGTTCCTTGTTTTGCAAAGATTCCTATCAAAATGCTTGTAGGAAATGGTATGCTGAATGGAATGGGTCAAAGTTTAACACATCTCAACAGCCATTTTTTTGGTGTTTATGATGGACATGGGGGCCCTCAGGTTGCTGATTATTGTCGAGAGCGTATACACTTGGCACTAGCTGAAGAGATAAGCGGATTCAAACAAAATCAAAATAATGGAAGCAATGGAGAAAACTGGCAGCAGGGTTGGGAGAGAACCTTTTACAATTGTTTTCTTAGGGTTGATGATGAAATAGAAGGAAAAGTTGGTAGAACAGTCAGTGGGAGTGGTGGAGATGTTTCCGATACAAGCTTCGAGCCTGTTGCCCCGGAAACTGTTGGCTCTACGGCTGTTGTTGCCTTGGTATGTTCATCACACATCATAGTTGCAAACTGTGGTGATTCAAGAGCAGTCCTATGCCGTGGTAAAGAACCCATGGCTCTATCGGTCGATCACAAACCAAATCGCGAAGATGAATTCGCTAGGATTGAATCATCTGGAGGCAAGGTCATCCAGTGGAATGGACATCGCGTGTTTGGAGTTCTTGCAATGTCAAGATCCATTGGTGATAGATATTTGAAGCCATGGATTATTCCTGATCCAGAAGTCATGTTCGTTCCTCGTGCAAAAGAAGACGAATGTCTTATTTTAGCCAGCGATGGACTGTGGGATGTGATGACAAATGAGGAAGTCTGTGAAATAGCTCGAAGGCGGATTCTGCTTTGGCACAAGAAACACGGGGCTTCGTCTCTTGCCGATCGGGGCACAGGAGTTGACCCTGCTGCTCAAGCTGCAGCAGATTACCTCTCAATGCTTGCTCTCCAAAAGGGAAGCAAAGACAACATCTCTGTCATTGTAGTGGACTTGAAAGCTCAAAGGAAGTTCAAGACCAAATCTTGA 1611 44.07 MMEEMSPAVSLTLSLGNPKSDSSVNPGHVEFTRLKLVTDTVNLFTASSPESGSIGNGSCHDFNGIVDSITVSQPTDNGQGIDSFWGLLPKNSTNLTVDKEGASLATLDDPDEMIDDGLFAIDGGSSINVQEVVKIGDVANGHIVAKAIILVESGKMPTSELIVATVSPDLEVSASSELNVPAVVFQSKGGDSVHKGIRSVFERDCIPLWGSVSICGRRPEMEDAIAAVPCFAKIPIKMLVGNGMLNGMGQSLTHLNSHFFGVYDGHGGPQVADYCRERIHLALAEEISGFKQNQNNGSNGENWQQGWERTFYNCFLRVDDEIEGKVGRTVSGSGGDVSDTSFEPVAPETVGSTAVVALVCSSHIIVANCGDSRAVLCRGKEPMALSVDHKPNREDEFARIESSGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPDPEVMFVPRAKEDECLILASDGLWDVMTNEEVCEIARRRILLWHKKHGASSLADRGTGVDPAAQAAADYLSMLALQKGSKDNISVIVVDLKAQRKFKTKS 536
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 32925935 32928104 - CrPI670011_07g017460.1 Cre07g1746 504327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g1746 536 PANTHER PROTEIN PHOSPHATASE 181 525 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cre07g1746 536 SMART PP2C_4 198 524 IPR001932 -
Cre07g1746 536 CDD PP2Cc 210 526 IPR001932 -
Cre07g1746 536 ProSiteProfiles PPM-type phosphatase domain profile. 208 526 IPR001932 -
Cre07g1746 536 ProSitePatterns PPM-type phosphatase domain signature. 259 267 IPR000222 GO:0043169(InterPro)
Cre07g1746 536 Gene3D - 195 536 IPR036457 -
Cre07g1746 536 MobiDBLite consensus disorder prediction 10 24 - -
Cre07g1746 536 Pfam Protein phosphatase 2C 236 519 IPR001932 -
Cre07g1746 536 FunFam Protein phosphatase 2C 16 196 536 - -
Cre07g1746 536 SUPERFAMILY PP2C-like 200 527 IPR036457 -
Cre07g1746 536 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g1884 Cre-Chr3:35782574 Cre07g1746 Cre-Chr7:32925935 2.20E-74 dispersed
Cre05g0943 Cre-Chr5:8617406 Cre07g1746 Cre-Chr7:32925935 1.10E-62 dispersed
Cre07g1746 Cre-Chr7:32925935 Cre08g0939 Cre-Chr8:22579871 9.90E-145 dispersed
Cre07g1746 Cre-Chr7:32925935 Cre03g0435 Cre-Chr3:2773531 1.00E-64 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g1746 K14497 - csv:101203499 999.579