Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g1765 ATGGAAGAAGGAACCGAGAAGAAAGTATCAGCAACAACATGTTTTATTACGGGACAGCTCATGATGTTCATATCGATCTATTATGCGTCTCTGCATCTAGCATTGGGTAGACCTCATACAATAACTGTCCTAGCTCTACCAATCCATGATGCCGCCGCCGCCGACGACGAACAACCCGACCACGCCGCCTTCCCGCATCTCATGCCGCTCCGCTCCGATGGATCTCTTTGTATCGCCGCCGCCCACGATTGGAGATCGTATGAGAATGAAATGGGTGCAACGAATGAAGAGGAAAGTCCAAAACTTGAGGACTTTCTGGGGAATTGCTATTCAAACTCACCGCCAAACGATCAGACGCATAGTAGCAACGCCGCCGCCTTTATTCAGCCGAATAATAATAATAATAATAATAATAATAATAATGATGATGATGATGATGATAAATACCATTACCAAGCGGATCATCAAACCCATCAATCTCTAATTCCTAACAATACTAATGGAATTTATAAGTCCTGGTTGGGACCCACTCCGCAAAATGAGTGTCGGTTTCAATCTCTTTCTCTCGGTATGAGCGCAAACTCCCAAAACGACGTCGCTTCATTGCCTTCACCGCCCTCGCCGCCGCCGCATATGGCTGGTGATTCCCGGAAACGCCCCATGCCGGTAGCCAAGCCTCTGATTAAAGAACCTGTTCCTAGAAAATCCATCGATACTTTTGGACAAAGAACCTCCCAGTATCGCGGTGTCACAAGGCATAGATGGACAGGAAGATATGAGGCACATTTATGGGATAACAGCTGTAGAAAAGAGGGACAAACAAGGAAGGGAAGGCAAGTTTATCTTGGTGGCTATGATAAGGAAGAGAAAGCGGCACGAGCGTATGATTTAGCTGCTTTAAAATATTGGGGACCAACTACGCATATAAATTTTCCGCTGAGCACTTATGAAAACGAGCTGGAAGAGATGAAGAACATGACCAGACAAGAGTTTGTAGCCAATTTGAGAAGGAAAAGCAGTGGATTCTCAAGAGGAGCTTCAATGTACAGAGGAGTTACAAGACATCATCAACATGGAAGGTGGCAAGCTAGAATAGGAAGGGTTGCAGGAAATAAAGATTTGTACCTTGGCACATTTAGCACACAAGAGGAGGCAGCGGAGGCGTATGACATAGCGGCCATCAAGTTTAGGGGGACAAGTGCAGTAACAAATTTCGACATTAGTAGGTATGACGTAAAGAGGATTTGCTCTAGCTCGACTCTGATTGCTAGTGACCTTGCGAAACGTTCACCATTAAAGGACGGTACTCCCTCAACTAATGAAGACTATTCTGCCTGTGCTTCTCCATCATCGTCCTCGCAACCTCTCTTGGCCATTACTGGCGATGGTGGTGCTGAGAGCCACCACGAGTTGGCGGACGTGGTTTGGTGTGACAATACTGCTACAGACGATAGTAATCAGCACCACGAGAACATAGCAAAGATGAACAACGACTTGAGTTTGATGGGTTCGAGCAATAGAACGATGGATCCATCGTCGAAGTGCTCTCCGGTGCAAAACAATGAAGAGTTCGGGATTGGGGTCGGGGCTGGAGGGGAGTACTCACAAGGCTATTTCTCAATGCAAGAAGAAAAATATGAAGATGGGAATGAGGAGGGTGATCAAAATGGTAGGCAGGTGAGTGTAACATTGGCTCATCATCATGTTCCAATGTTTGCACTATGGAACCAATGA 1734 46.08 MEEGTEKKVSATTCFITGQLMMFISIYYASLHLALGRPHTITVLALPIHDAAAADDEQPDHAAFPHLMPLRSDGSLCIAAAHDWRSYENEMGATNEEESPKLEDFLGNCYSNSPPNDQTHSSNAAAFIQPNNNNNNNNNNNDDDDDDKYHYQADHQTHQSLIPNNTNGIYKSWLGPTPQNECRFQSLSLGMSANSQNDVASLPSPPSPPPHMAGDSRKRPMPVAKPLIKEPVPRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWGPTTHINFPLSTYENELEEMKNMTRQEFVANLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGTSAVTNFDISRYDVKRICSSSTLIASDLAKRSPLKDGTPSTNEDYSACASPSSSSQPLLAITGDGGAESHHELADVVWCDNTATDDSNQHHENIAKMNNDLSLMGSSNRTMDPSSKCSPVQNNEEFGIGVGAGGEYSQGYFSMQEEKYEDGNEEGDQNGRQVSVTLAHHHVPMFALWNQ 577
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 33149737 33154369 + CrPI670011_07g017650.1 Cre07g1765 504346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g1765 577 MobiDBLite consensus disorder prediction 433 454 - -
Cre07g1765 577 MobiDBLite consensus disorder prediction 104 150 - -
Cre07g1765 577 ProSiteProfiles AP2/ERF domain profile. 246 312 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cre07g1765 577 SMART rav1_2 348 412 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cre07g1765 577 SMART rav1_2 246 318 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cre07g1765 577 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 140 465 - -
Cre07g1765 577 SUPERFAMILY DNA-binding domain 245 314 IPR016177 GO:0003677(InterPro)
Cre07g1765 577 CDD AP2 347 408 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cre07g1765 577 Pfam AP2 domain 246 304 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cre07g1765 577 Pfam AP2 domain 349 398 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cre07g1765 577 PRINTS Ethylene responsive element binding protein signature 388 408 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cre07g1765 577 PRINTS Ethylene responsive element binding protein signature 247 258 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cre07g1765 577 Gene3D AP2/ERF domain 245 314 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Cre07g1765 577 Gene3D AP2/ERF domain 348 408 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Cre07g1765 577 FunFam AP2-like ethylene-responsive transcription factor 347 408 - -
Cre07g1765 577 MobiDBLite consensus disorder prediction 429 454 - -
Cre07g1765 577 MobiDBLite consensus disorder prediction 109 139 - -
Cre07g1765 577 MobiDBLite consensus disorder prediction 195 221 - -
Cre07g1765 577 FunFam AP2-like ethylene-responsive transcription factor ANT 245 314 - -
Cre07g1765 577 SUPERFAMILY DNA-binding domain 347 408 IPR016177 GO:0003677(InterPro)
Cre07g1765 577 CDD AP2 245 314 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cre07g1765 577 ProSiteProfiles AP2/ERF domain profile. 348 406 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cre07g1765 577 Pfam Ycf1 2 47 IPR008896 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g2819 Cre-Chr5:38892665 Cre07g1765 Cre-Chr7:33149737 2.60E-99 dispersed
Cre07g1765 Cre-Chr7:33149737 Cre11g1355 Cre-Chr11:15777955 7.40E-98 dispersed
Cre07g1765 Cre-Chr7:33149737 Cre08g1616 Cre-Chr8:28644650 7.20E-109 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
54086 PF00847 AP2 4.60E-13 CL0081 Cre TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g1765 K09285 - csv:101205762 853.588