Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g1776 ATGCAGCTTCTTCCCCGCCATTTCTTCCTACTGGTATGCTTCTCTTTCCCTATCTGTGTCGTTTTTGGCTTAACCTCAGATGGGTTGGCTTTATTGTCCCTCCAAACCCGCTGGACTACCCAAACCCCTTCTGTCCCTGTTTGGAATGCTTCTGATTCCACTCCCTGTTCTTGGGCTGGGATTGAATGTGATCAAAACCTTCTTGTCATCACCTTGAATCTCTCTTATTATGGGGTCACGGGTCAGCTTGGACCCGAAATTGCACGTTTGACCCACTTGCGTACCATTGATTTGAACACCAACGGTTTCTCTGGTGAAATTCCTTATGGGATAGGTAACTGCAGCCATTTAGAGTTCTTGGATCTTTCCCTCAACCAATTTGGTGGAGAAATTCCTCAGTCATTAACGCTCCTTAGGAACTTGACGTTTTTGAACTTCCATGACAATGTTCTAACTGGTGCAATACCCGACTCCTTATTTCAAAATCTTAATTTGCAGTATGTGTATCTTAGTGAAAACAATCTCAACGGTTCTATCCCTTCAAATGTGGGGAATTTGAGGCAACTAATTCATTTGTATCTGTATGGAAATCAGTTGTCTGGTACCATACCTTCTTCCATAGGGAATTGTAGCCAATTGGAGGATCTTTATTTGGATCAGAATCAGTTAGTTGGAATATTGCCCAACAGTCTTAACAATCTCGATAATCTTGTTAATCTGGGTGTAAGCCACAACAATCTTGAGGGTCCAATTCCTTTGGGTTCAGGCAGTTGCCAGAGTCTTGAATTTGTAGATTTGTCTTTCAATGGTTATACAGGAGGTATACCAGCTGGGCTAGGCAACTATAGTCGCCTAACAACCTTAATCATTGTCAATTCAAGTCTAACAGGTCATATTCCTTCCTCCTTTGGCCAGCTAAGTAACCTTTCGCATCTTGATCTCTCTAGAAATCAACTGTCTGGTAATATACCTCCTGAATTTGGGGCTTGCAAATCCTTGAAAGAACTGGATTTGTACGTCAACCAACTTGAGGGAGGTATCCCTAGTGAATTGGGTTTGATAAGTGGATTAGAGACCCTTCAATTGTTTTCGAACCGGTTGACTGGTGAGATTCCAATTAGCATCTGGAAGATTGCAAGTCTCCAACATATTCTTGTGTACGACAACAACCTCTCTGGGGAACTGCCCTCGATAATAACTGAACTCAAGCACCTCAAAAACATTTCTGTATTCGACAACCATTTTTCTGGAGTCATACCTCAAAGCTTGGGACTCAACAGTAGCTTAGTGCAAGTGGAGTTCACCAATAACCAGTTCACTGGTCAAATTCCACCTAATTTATGCTCTGGAAAGACATTAAAGGTGTTAAACTTAGGTTTGAATCAATTTCAAGGAAACATACCTTCTGATATAGGAACTTGTTTGACTCTTCAGAGATTGATTTTGCAAAGGAACAACCTCACAGGGTTTCTGCCACAATTTATGAGAAATCACAGCCTATCGTACATCGATGCCAATGAAAATAACCTGAATGGAACAATTCCATCAAGTTTGGGAAATTGCACCCTTCTCACTTCAATTAATTTGTCAAACAACAAGCTTACAGGTCATATACCAAATGAGTTAGGCAATCTTGTGAATCTTCAAAGTTTGAAATTGTCTCACAACTTCTTAGAAGGACCTTTGCCATCTTCCCTCTCAAATTGCACCAAAATGAATACGTTTGACGTAGGATTCAATTTATTGAATGGTTCTGTACCTCATAGTTTGGCCAGCTGGAAAGTAATATCCACTTTGATATTAAAAGAGAATGGATTTACTGGAGGCCTCCCGAATGTATTATCAGAACTTCAAAGCCTTTTACTACTAGATCTTGGTGGCAATTTGTTTGGAGGTGAAATTCCTTCAAATATTGGAGATTTACAGAATCTATTTTATTCCTTGAATCTAAGTAACAATGGGTTAACTGGTCAACTACCTTCTGAGCTCGTGAGTCTGATCAAGCTAGAGGGGTTGGATTTATCTCACAATAATTTGACTGGAAGTCTTAGTGTTCTTGGTGAACTTAGTTCATCGTTAATGGACCTTGACATTTCAGATAATTTCTTTACAGGTCCTGTGCCGCAAACATTAATGAAGTTACTGAAGTCTCATCCCTCATCGTTCTTTGGTAACCCTGGGCTGTGCATTAGCTGTGATGAACTAGATGGCTTAAGTTGCAATAGAAATATCAGTATCAATCCTTGTGCTACTCATTCAAGCTCACGTGGTAGCTCTCGTCTTGGCAAAGTACAGATTGCAATGATAGCTCTTGGGTCTTCACTCTTTATTATTCTTTTGCTTCTTGGGTTGGTTTATAAGTTTGTTTGTAGCAGAAGAAACAAGCAAAACATTGAGACTGCTGCTCAAGGAGGAACAACTTCCTTGCTTGAAAAGGTAATGGAGGCCACTGATAATCTAGATGAGCGTTTCATCATTGGGAGAGGAGCACATGGAGTTGTTTATAAGGCCTCCCTGGATTCAAATAAAATTTTTGCAGTAAAGAAGCTTACATTTATAGAACGTAAAGGGGGAAGTCGGAATATGGTTAAAGAAATTAGAACTGTCAACAACATCAAGCACCGAAACTTGATCTCTTTGGAAGATTTTTGGTTAGGAAAAGACCATGGTCTATTGCTTTACAAATACTATCCGAATGGAAGCCTTTATGATGTGTTGCATGGCATGAATCCAGCTCCAGCTCTAACATGGAAAGCCCGCTATAATATAGCAATTGGTATTGCTCATGGATTGGCGTATCTCCATTACGATTGTGATCCTCCCATAATACACCGAGACATCAAACCGCATAATATACTTCTAGATTCGGAGATGGAACCTCATATCGCCGATTTTGGTCTTGCAAGGCTGTTGGATCAAACTTCTGAATCAGCAACTTCATCATCTTTTGTGGGTACAATTGGCTACGTTGCACCAGAGAATGCATTTTCAGCAGCAAGGAGCAAAGCCTCAGATGTGTACAGCTATGGGGTGGTTTTACTCGAGCTGATAACCGGAAAGAAGCCATCAGATCCATCATTTACGGAGGTCGGAAATATGATGGCTTGGGTTCGATCGGTTTGGAATGAGACAGGTGAAATAGATAGAATTGTTGATTCAAGACTTGTGGAAGAACTTAGTAATTTTGATCATAGGGAGCAGATGAAGCAGGTGCTTCTTGTGGCTTTGCGATGCACAGAAAAGGAGCCTAACAGGAGACCGAGAATGAGAGATATTGTGGACCACTTGATTGATTCAAAGACGAGCCATTACAGCAAGCATGGCTAA 3327 40.73 MQLLPRHFFLLVCFSFPICVVFGLTSDGLALLSLQTRWTTQTPSVPVWNASDSTPCSWAGIECDQNLLVITLNLSYYGVTGQLGPEIARLTHLRTIDLNTNGFSGEIPYGIGNCSHLEFLDLSLNQFGGEIPQSLTLLRNLTFLNFHDNVLTGAIPDSLFQNLNLQYVYLSENNLNGSIPSNVGNLRQLIHLYLYGNQLSGTIPSSIGNCSQLEDLYLDQNQLVGILPNSLNNLDNLVNLGVSHNNLEGPIPLGSGSCQSLEFVDLSFNGYTGGIPAGLGNYSRLTTLIIVNSSLTGHIPSSFGQLSNLSHLDLSRNQLSGNIPPEFGACKSLKELDLYVNQLEGGIPSELGLISGLETLQLFSNRLTGEIPISIWKIASLQHILVYDNNLSGELPSIITELKHLKNISVFDNHFSGVIPQSLGLNSSLVQVEFTNNQFTGQIPPNLCSGKTLKVLNLGLNQFQGNIPSDIGTCLTLQRLILQRNNLTGFLPQFMRNHSLSYIDANENNLNGTIPSSLGNCTLLTSINLSNNKLTGHIPNELGNLVNLQSLKLSHNFLEGPLPSSLSNCTKMNTFDVGFNLLNGSVPHSLASWKVISTLILKENGFTGGLPNVLSELQSLLLLDLGGNLFGGEIPSNIGDLQNLFYSLNLSNNGLTGQLPSELVSLIKLEGLDLSHNNLTGSLSVLGELSSSLMDLDISDNFFTGPVPQTLMKLLKSHPSSFFGNPGLCISCDELDGLSCNRNISINPCATHSSSRGSSRLGKVQIAMIALGSSLFIILLLLGLVYKFVCSRRNKQNIETAAQGGTTSLLEKVMEATDNLDERFIIGRGAHGVVYKASLDSNKIFAVKKLTFIERKGGSRNMVKEIRTVNNIKHRNLISLEDFWLGKDHGLLLYKYYPNGSLYDVLHGMNPAPALTWKARYNIAIGIAHGLAYLHYDCDPPIIHRDIKPHNILLDSEMEPHIADFGLARLLDQTSESATSSSFVGTIGYVAPENAFSAARSKASDVYSYGVVLLELITGKKPSDPSFTEVGNMMAWVRSVWNETGEIDRIVDSRLVEELSNFDHREQMKQVLLVALRCTEKEPNRRPRMRDIVDHLIDSKTSHYSKHG 1108
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 33224049 33227475 - CrPI670011_07g017760.1 Cre07g1776 504357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g1776 1108 ProSitePatterns Protein kinases ATP-binding region signature. 826 849 IPR017441 GO:0005524(InterPro)
Cre07g1776 1108 PRINTS Leucine-rich repeat signature 309 322 - -
Cre07g1776 1108 PRINTS Leucine-rich repeat signature 666 679 - -
Cre07g1776 1108 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 24 178 - -
Cre07g1776 1108 Pfam Leucine Rich Repeat 668 683 IPR001611 GO:0005515(InterPro)
Cre07g1776 1108 Pfam Leucine Rich Repeat 116 136 IPR001611 GO:0005515(InterPro)
Cre07g1776 1108 Pfam Leucine Rich Repeat 189 210 IPR001611 GO:0005515(InterPro)
Cre07g1776 1108 Pfam Leucine Rich Repeat 92 114 IPR001611 GO:0005515(InterPro)
Cre07g1776 1108 Pfam Leucine Rich Repeat 164 186 IPR001611 GO:0005515(InterPro)
Cre07g1776 1108 Pfam Leucine Rich Repeat 647 666 IPR001611 GO:0005515(InterPro)
Cre07g1776 1108 Pfam Leucine Rich Repeat 499 521 IPR001611 GO:0005515(InterPro)
Cre07g1776 1108 Pfam Leucine Rich Repeat 212 234 IPR001611 GO:0005515(InterPro)
Cre07g1776 1108 Pfam Leucine Rich Repeat 524 545 IPR001611 GO:0005515(InterPro)
Cre07g1776 1108 Pfam Leucine Rich Repeat 547 569 IPR001611 GO:0005515(InterPro)
Cre07g1776 1108 SMART serkin_6 820 1097 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre07g1776 1108 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 785 896 - -
Cre07g1776 1108 ProSiteProfiles Protein kinase domain profile. 820 1098 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre07g1776 1108 Gene3D Ribonuclease Inhibitor 592 735 IPR032675 -
Cre07g1776 1108 Gene3D Ribonuclease Inhibitor 494 591 IPR032675 -
Cre07g1776 1108 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Cre07g1776 1108 Gene3D Ribonuclease Inhibitor 281 493 IPR032675 -
Cre07g1776 1108 SUPERFAMILY RNI-like 72 417 - -
Cre07g1776 1108 Pfam Leucine rich repeat 283 343 IPR001611 GO:0005515(InterPro)
Cre07g1776 1108 SMART LRR_typ_2 138 162 IPR003591 -
Cre07g1776 1108 SMART LRR_typ_2 211 233 IPR003591 -
Cre07g1776 1108 SMART LRR_typ_2 306 330 IPR003591 -
Cre07g1776 1108 SMART LRR_typ_2 90 114 IPR003591 -
Cre07g1776 1108 SMART LRR_typ_2 617 641 IPR003591 -
Cre07g1776 1108 SMART LRR_typ_2 186 210 IPR003591 -
Cre07g1776 1108 SMART LRR_typ_2 545 569 IPR003591 -
Cre07g1776 1108 SMART LRR_typ_2 666 689 IPR003591 -
Cre07g1776 1108 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 647 1096 IPR050647 -
Cre07g1776 1108 SUPERFAMILY RNI-like 349 700 - -
Cre07g1776 1108 Gene3D Transferase(Phosphotransferase) domain 1 897 1107 - -
Cre07g1776 1108 SUPERFAMILY Protein kinase-like (PK-like) 803 1096 IPR011009 -
Cre07g1776 1108 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 180 275 - -
Cre07g1776 1108 Gene3D Ribonuclease Inhibitor 25 179 IPR032675 -
Cre07g1776 1108 Gene3D Ribonuclease Inhibitor 180 280 IPR032675 -
Cre07g1776 1108 FunFam Serine/threonine-protein kinase-like protein CCR4 897 1108 - -
Cre07g1776 1108 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 451 737 - -
Cre07g1776 1108 ProSiteProfiles Leucine-rich repeat profile. 668 690 IPR001611 GO:0005515(InterPro)
Cre07g1776 1108 Gene3D Phosphorylase Kinase; domain 1 785 896 - -
Cre07g1776 1108 ProSitePatterns Serine/Threonine protein kinases active-site signature. 942 954 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre07g1776 1108 Pfam Protein kinase domain 825 1095 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre07g1776 1108 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 300 395 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g1776 Cre-Chr7:33224049 Cre07g2020 Cre-Chr7:35813225 2.80E-61 dispersed
Cre07g1776 Cre-Chr7:33224049 Cre07g1779 Cre-Chr7:33258926 3.70E-18 proximal
Cre07g1775 Cre-Chr7:33216425 Cre07g1776 Cre-Chr7:33224049 8.00E-32 tandem
Cre07g1776 Cre-Chr7:33224049 Cre07g1777 Cre-Chr7:33233800 8.30E-37 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64288 PF00069 Pkinase 9.30E-47 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g1776 K28089 - csv:101204561 1790.78