Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g1782 ATGTTCTTGGTGGATGCAGGACTTGGGACCCCCATAATTTGTATGCAAGATGAGCCTATAGGAGTGTCAATCAACCGAGCCACCAGGTTTGAGAATAAGGTGGGATCCGTGGATCTAGTGGCCGGTGAATCACTGATCAAACATCAAATTTTGGAGAGATTCTTCATTGATCTAGTGGCCAGCGAATCACTGATCAAAGAGCGAGCTGTCGCCAGCAAAGCTGTTTGTGAAAATGCCGCAGAGGCAGACCCCACTCCAAAGTTGTCGTGGAGCCCAACTCTTGCGAGCTCAGTCCCACCATTCGTCCGGATTTCAACCCTTGTGTTGGGCTTTGCCCTTGATTTTGATCCCTTCAGATATTCCTTAATCTGCTTTGTAGAGCTTGGTGCTGGCCATATTTGTCCTGCCTGCCAGAGCTATAAAGAAACATTTTTCCCATTCTTAGAAAAGGGAAGAAGGGAAAGAGCAAGTGATTTTATCAATGGAGCTACGGATCCAGGAGATGTCTCGGCGCTAAATGCAATGTATAATAGTTTAAACTCGCCTCCAATTCTAACACAATGGAGTTCAAGTGGTGGAGATCCATGTGGACAAATTTGGAAAGGCGTTACTTGCTTAAGCTCACGGGTCACAGAAATTTCATTGTCTGGTTTAGGACTTTCTGGATCACTGGGATACCAGCTCTCAAGTTTGACATCTCTAAGTAATCTAGATGTGAGTAACAACAATCTTGGACCTGACATACCTTATCAACTCCCTCAAAACTTGCAAAAACTAAACCTTGCATGGAATAACTTCAGTGGAAGCATCCCCTATTCTATTTCTCAAATGAGTTCGCTTATTTCCTTGAACATGAGCCACAACCAGCTTCAGAATCAAGTGAATGATATGTTCTGGAAGCTTTCTTCCCTGTCCATGTTGGATGTCTCTTTCAATTTTCTGTCAGGTGCCCTCCCCCAGAGTTTTAGCAACCTTACCAGTCTGAACACAATGTTTCTGCAAAACAACCAATTCAGTGGCACTATTGATGTTCTTGCAAATCTTCCGCTACAAAATTTGAATGTCGAGAACAACCATTTTACTGGGTGGGTTCCTGAAAGATTGAAGAACATTAATATTCAGGAGGGTGGCAATTCTTGGAGTTTTGGGCTTGCACCCCCACCTCCACCTGGGACACCTCCAGCCAACCAAAATTACAGATATCACAAGGCTGGGAACAATTACAGCCCACTGAGTAGTGCTGGTGGTGGTGGCGGTAGCAATAGATCAGGAATCAGTGGTGGTGCCATTGCTGGAATTCTTATATCTGTGCTAGTGGTAGGAGCAGTACTAGCATATCTCCTTGTAAAGAGAAGACCCAAGAGGTCATCCACAGACATAGAAAAGCAAAAGCATGGGAACTTGCCTAGCGTATCTCCTGCTTCAAATGAAGTGCAAGATACATTGGCAGAGATGAAACTTGTTCATACTTCATCCTCATTTGATGCAAAAGAATTGGATTCTCCTGCTTCAATCAATCTTAAACCCCCACCTATTGATCGTCATAAATCATTCGACGACAATGATACATCAAAGGTACCTGTGGTGAAGAAGACCAATGTCACTCCTCCGATAAGTGTGAAATCATATTCAATAGCAGATCTGCAAATGGCTACAGGTAGTTTCAGTGTAGAAAACCTTCTCGGTGAGGGATCACTTGGTCGTGTTTATCGGGCTCAGTTCAACGATGGGAAGGTTCTTGCCGTGAAGAAAATAGATTCAGCTGCCTTCCCTAAAGAATTGTTGGAATATTTCACGGAGATAGTTGCTAATGTATCTCAGTTGCATCATCCTAATGTAACCGAGCTAATGGGTTATTGCTCGGAGCATGGCCTGCATTTGCTACTATATGAGTTCCATAAGAATGGCTCACTACATGACTTCTTGCACATATCAGATGAATATAGCAAGCCACTGACTTGGAACTCACGTGTCAAGATTGCTTTGGGAACGGCCCGTGCTTTGGAGTACCTACATGAAGTTTGTGCCCCGTCTGTTGTTCACAGAAATATTAAGTCATTCAATATCTTACTAGATGCTGAAATGAATCCTCATCTCTCCGATTGTGGCCTGGCTAGCTTTATAACCAATCTAGATCAGGTATTAGATCAGCAGCCAGGATCTGGGTACAGTGCTCCTGAGGTTACAATGTCTGGCCAATATACATTAAAAAGCGACGTATATAGCTTTGGAGTGGTGATGTTGGAACTTCTAAGCGGACGCAAGCCATTTGATAGTTCAAGGCCAAGAGCTGAGCAATCCTTGGTTCGATGGGCTACACCTCAGCTCCATGATATTGATGCCTTAACGAAAATGGTTGATCCTGCACTTAAAGGCCTCTACCCAGTCAAGTCTCTTTCAAGATTCGCAGACGTTGTAGCTCTCTGTGTCCAGCCTGAGCCTGAATTCAGACCACCCATGTCAGAGGTGGTGGAAGCGTTGGTTCGGCTTGTGCAGAGATCCAACATGAGCAGAAGAACATTTGGAAGTGATCATGGGTCATCTTTTAGAACTGATGATCCTGATACACGCGAGACATCTTAA 2583 44.13 MFLVDAGLGTPIICMQDEPIGVSINRATRFENKVGSVDLVAGESLIKHQILERFFIDLVASESLIKERAVASKAVCENAAEADPTPKLSWSPTLASSVPPFVRISTLVLGFALDFDPFRYSLICFVELGAGHICPACQSYKETFFPFLEKGRRERASDFINGATDPGDVSALNAMYNSLNSPPILTQWSSSGGDPCGQIWKGVTCLSSRVTEISLSGLGLSGSLGYQLSSLTSLSNLDVSNNNLGPDIPYQLPQNLQKLNLAWNNFSGSIPYSISQMSSLISLNMSHNQLQNQVNDMFWKLSSLSMLDVSFNFLSGALPQSFSNLTSLNTMFLQNNQFSGTIDVLANLPLQNLNVENNHFTGWVPERLKNINIQEGGNSWSFGLAPPPPPGTPPANQNYRYHKAGNNYSPLSSAGGGGGSNRSGISGGAIAGILISVLVVGAVLAYLLVKRRPKRSSTDIEKQKHGNLPSVSPASNEVQDTLAEMKLVHTSSSFDAKELDSPASINLKPPPIDRHKSFDDNDTSKVPVVKKTNVTPPISVKSYSIADLQMATGSFSVENLLGEGSLGRVYRAQFNDGKVLAVKKIDSAAFPKELLEYFTEIVANVSQLHHPNVTELMGYCSEHGLHLLLYEFHKNGSLHDFLHISDEYSKPLTWNSRVKIALGTARALEYLHEVCAPSVVHRNIKSFNILLDAEMNPHLSDCGLASFITNLDQVLDQQPGSGYSAPEVTMSGQYTLKSDVYSFGVVMLELLSGRKPFDSSRPRAEQSLVRWATPQLHDIDALTKMVDPALKGLYPVKSLSRFADVVALCVQPEPEFRPPMSEVVEALVRLVQRSNMSRRTFGSDHGSSFRTDDPDTRETS 860
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 33278222 33286523 + CrPI670011_07g017820.1 Cre07g1782 504363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g1782 860 MobiDBLite consensus disorder prediction 501 524 - -
Cre07g1782 860 MobiDBLite consensus disorder prediction 845 860 - -
Cre07g1782 860 Gene3D Transferase(Phosphotransferase) domain 1 634 850 - -
Cre07g1782 860 MobiDBLite consensus disorder prediction 838 860 - -
Cre07g1782 860 Pfam Leucine rich repeat N-terminal domain 166 205 IPR013210 -
Cre07g1782 860 SMART LRR_typ_2 231 255 IPR003591 -
Cre07g1782 860 SMART LRR_typ_2 277 300 IPR003591 -
Cre07g1782 860 SMART LRR_typ_2 301 324 IPR003591 -
Cre07g1782 860 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 633 841 - -
Cre07g1782 860 PANTHER LEUCINE RICH REPEAT KINASE 2 431 829 IPR051420 -
Cre07g1782 860 Pfam Protein tyrosine and serine/threonine kinase 557 827 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre07g1782 860 MobiDBLite consensus disorder prediction 455 475 - -
Cre07g1782 860 ProSiteProfiles Protein kinase domain profile. 555 830 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre07g1782 860 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 165 391 - -
Cre07g1782 860 CDD STKc_IRAK 561 830 - -
Cre07g1782 860 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 519 632 - -
Cre07g1782 860 Gene3D Ribonuclease Inhibitor 165 385 IPR032675 -
Cre07g1782 860 MobiDBLite consensus disorder prediction 379 404 - -
Cre07g1782 860 SUPERFAMILY Protein kinase-like (PK-like) 535 827 IPR011009 -
Cre07g1782 860 Pfam Leucine rich repeat 255 312 IPR001611 GO:0005515(InterPro)
Cre07g1782 860 Gene3D Phosphorylase Kinase; domain 1 516 632 - -
Cre07g1782 860 SUPERFAMILY L domain-like 164 370 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g0464 Cre-Chr2:1860602 Cre07g1782 Cre-Chr7:33278222 1.00E-105 dispersed
Cre04g1889 Cre-Chr4:36527528 Cre07g1782 Cre-Chr7:33278222 5.20E-104 dispersed
Cre07g1782 Cre-Chr7:33278222 Cre07g1939 Cre-Chr7:34842364 4.90E-69 dispersed
Cre01g0871 Cre-Chr1:11709977 Cre07g1782 Cre-Chr7:33278222 1.00E-152 transposed
Cre08g0455 Cre-Chr8:15567662 Cre07g1782 Cre-Chr7:33278222 4.70E-163 transposed
Cre10g1853 Cre-Chr10:33120983 Cre07g1782 Cre-Chr7:33278222 3.20E-98 transposed
Cre07g1782 Cre-Chr7:33278222 Cre09g0136 Cre-Chr9:1624505 1.20E-203 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64291 PF07714 PK_Tyr_Ser-Thr 3.30E-40 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g1782 - - - 0.0