Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g1809 ATGGAGCCGTCTCTTGAACTTTCAGAAACGCCCGAGCAGATTATTCTACGATGGGACTCGGCCGCACCGGAGGAGGTGAAGGATAAGATGATTTTTGACTCTGACAGGGAAGAGATCGACCGTTATTTGCAGGCTGTTGATGAAATCCAGAGGTCTATGTCGTCGGCTACCATTTCGGACGATCAGAACAAAGTCGATTCCACTATGCAGATCGCCATGGCTAGGCTTGAGGATGAGTTCCGTCACATTCTTTCCAGTCATACCACTCCGATCGAGGTCGAGTCGCTTACTGATCCGAGTCCATCTTCTCGCTCCATGTCCACTAGTGGGAGTGGTGTGTTCGAGGATGAAAACGATGAGGAACCGGAGTTACAGGAAGTTCAGCTCGATTTAACTGGCAGTCCAAGTTTTGGGTCCAGCGGTCGATCGAGCTACCGGGCGACCAGCAGTATTCGTGAAATTGATCTGATACCTTCGGATGCGGTTATCGATCTACGAAGTATTGCTGAACGGATGATATCGGCGGGGTACCTGCGGGAGTGCATCCAAGTTTATGGCAGTGTGCGAAAGTCCACCTTCGACTCCAGCTTCCGACGGCTCGGAATTGAGAAACTGAGCATTGGGGATATCCAGAGGCTGGATTGGAATGAGCTGGAGACGAAGATCAGAAGGTGGATTAGAGCAGCAAAGGTGTCTATTAGGACTTTGTTTTCCAGCGAGAAGAAACTCTGCGAGCAAATTTTTTATGGCATAGGGACCGCCATAGACGATGCTTGTTTCATGGAGACTGTAAAAGGTCCTGTGACTCAGTTGTTCAATTTCGCCGAAGCGATCAGTATAAGCCGCAGATCGCCGGAGAAGCTGTTCAAGATTCTAGACCTCCACGATGCCTTCACGGAGTTGATACCTGACATTGATATAATATTCGAATCAAAATCTGCGGAGTATATCCGAATTCAGGCGGCGGAGATATTGTCGCGGCTGGCGGAGGCCGTCAGAGGGACTTTATCGGAGTTTGAAAATGCGGTGCTGCGGGAGCCGTCGACGCATCCGGTTCCCGGCGGAACGCTTCATCCGTTGACAAGGTACGTAATGAACTATGTGAGTCTGATTTCGGACTACAAAGTGACCTTAGACGAGCTCATCGTGTCCAAACCATCGACGGGCTCGAGGTATTCGGCCGACCCCACAACCCCAGATATGGACTTTGGTGAGCTAGAGGGCAAAACGCCATTAGCGCTCCATCTTATATGGAGCATCGTGATTCTGCAGTTCAATTTGGAGGGGAAATCCAGGCACTACAAAGACCCTTCTCTAGCTCATCTCTTCATCATGAACAACGTTCATTACATCGTTCAGAAGATAAAAGGATCCCCAGAGTTGCGAGAAATGATCGGAGACGTTTATCTAAAAAGGCTGACCGGGAAGTTTCGACAGGCGGCCACAAACTACGAGAGAACAACGTGGGTGAATGTGCTGTATTGCCTGCGAAACGAAGGGTTGAATGTGGGCGGGAGCTTGTCTTCCGGCCCCGCAAAGAGTCTTATTAGAGATAGATTCAAGACTTTCAACGCCATGTTTGAGGAGGTTCACAGGACACAATCAGCATGGTTGATACCAGATTCTCAGCTGAGGGAGGAGCTGCGCATATCCATAACTGAGAAGTTGATTCCAGCTTACAGGTCGTTTCTTGGCCTCCATGGCCACCACATAGAGAGTGGAAAACACCCCGAAAATTACATCAAGTACTCCGTCGACGAACTGGAAAATGCCATCTTGGATTTCTTTGAGGGTTGCTCGGCAACCCATAACTTGAGAAGGAGATCTCACTGA 1833 49.48 MEPSLELSETPEQIILRWDSAAPEEVKDKMIFDSDREEIDRYLQAVDEIQRSMSSATISDDQNKVDSTMQIAMARLEDEFRHILSSHTTPIEVESLTDPSPSSRSMSTSGSGVFEDENDEEPELQEVQLDLTGSPSFGSSGRSSYRATSSIREIDLIPSDAVIDLRSIAERMISAGYLRECIQVYGSVRKSTFDSSFRRLGIEKLSIGDIQRLDWNELETKIRRWIRAAKVSIRTLFSSEKKLCEQIFYGIGTAIDDACFMETVKGPVTQLFNFAEAISISRRSPEKLFKILDLHDAFTELIPDIDIIFESKSAEYIRIQAAEILSRLAEAVRGTLSEFENAVLREPSTHPVPGGTLHPLTRYVMNYVSLISDYKVTLDELIVSKPSTGSRYSADPTTPDMDFGELEGKTPLALHLIWSIVILQFNLEGKSRHYKDPSLAHLFIMNNVHYIVQKIKGSPELREMIGDVYLKRLTGKFRQAATNYERTTWVNVLYCLRNEGLNVGGSLSSGPAKSLIRDRFKTFNAMFEEVHRTQSAWLIPDSQLREELRISITEKLIPAYRSFLGLHGHHIESGKHPENYIKYSVDELENAILDFFEGCSATHNLRRRSH 610
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 33492035 33493867 + CrPI670011_07g018090.1 Cre07g1809 504390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g1809 610 Gene3D Exocyst complex component Exo70 14 606 - -
Cre07g1809 610 MobiDBLite consensus disorder prediction 87 123 - -
Cre07g1809 610 SUPERFAMILY Cullin repeat-like 11 597 IPR016159 -
Cre07g1809 610 MobiDBLite consensus disorder prediction 88 113 - -
Cre07g1809 610 Pfam Exo70 exocyst complex subunit C-terminal 224 594 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Cre07g1809 610 Pfam Exocyst complex component Exo70 N-terminal 12 85 - -
Cre07g1809 610 PANTHER EXOCYST COMPLEX PROTEIN EXO70 11 598 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(PANTHER)|GO:0006887(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g1627 Cre-Chr3:32303281 Cre07g1809 Cre-Chr7:33492035 5.50E-121 dispersed
Cre05g2361 Cre-Chr5:35193826 Cre07g1809 Cre-Chr7:33492035 2.30E-103 dispersed
Cre07g1809 Cre-Chr7:33492035 Cre07g1981 Cre-Chr7:35220282 1.30E-103 dispersed
Cre07g1809 Cre-Chr7:33492035 Cre02g2353 Cre-Chr2:36944713 4.60E-90 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g1809 K07195 - csv:101204229 1129.39