Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g1833 ATGCCAACGGGCGTGCGCGTGGTGGGGCTTATGCGCGCACCGGCCCCAACCATCAGCGCCGCTTCTCTCATTCTCTTCTTCTTCCTCCTCCTCTCATCTTCATGCATAATGGTGGTGTTATCGGCCTCAGACGCCGAAACACTGCTTCAATTCAAGCGGTCATTGACGTCAGCAGTGGCTCTTAACAACTGGAACCCATCGGTCCCTCCTTGCGAGAACAACAAGGCCAATTGGGCGGGTGTGCTTTGTTTGAATGGACATGTTAGGGGTCTAAGGCTTGAGAATATGGGGCTTAAGGGAGAGGTTGATGTGAATTCGTTGGTTTCTATGACTCGTTTGAGGACACTGAGCTTCATGAACAACACATTGGTTGGGGGTTGGCCTCGTGTTATAAGCAAATTAGGGAGTCTACGTTCTGTTTATCTTTCCTATAACCATTTTTCAGGACAAATCCCAGACGATGCTTTTGCGGGTATGAAATTTTTGAAGAAAGTGTTTTTGACCAATAATGAATTCAACGGCCCCATTCCCTCATCTCTCGCTTCACTGTCTAGGCTTATGGAGTTGAGACTTGATGGAAACAAATTCAAAGGCCAAGTCCCTCGATTTCAAATCGATACTTTGAAGAAACTTAATGTTTCCAACAATGAATTGGAGGGCCCAATTCCTAGTAGCTTATCCCATATGGATCCTTCCTGCTTTGCAGGTAACCGTGATCTGTGTGGGGATCCTCTACCAGCATGTGGGAGTGCGATATCATCCTCAGGGCTTCTAAAAATCGCAGTGATAGTGATAATTTTGGGGTTAACATTAGCAGTAATAGCTGCAATATTCATCATAATGAATTTAAGGAAGCAGCCAGCAGCGGTGCAACTGGGGAAGGGGAATCCAGGGATTATCATTGAAGAGGATCAGAACAAATACATGAATAATGGTAAGCAAATGACGGCGGGGGCGGGGGCGGGAGATGGATACAGATCGACGGAGTCGTCGGTGGCTCAGGCTCCGAAGAGAGGGGCAGAACATGGGAAACTGTTGTTCGTGAGAGATGATAGGGAGAAGTTCGATTTACAAGACCTGCTAAGAGCGTCGGCGGAGATATTGGGGAGTGGCTCATTCGGGTCTTCTTATAAAGCAACTATACTTTGTAATGCGGTGGTGGTGAAGCGTTACAAGCATATGAACAATGTGGGAAGAGAGGAGTTTCATGAGCATATGAGAAGGTTAGGTAGATTGACGCATGCAAATCTACTCCCTTTGGTTGCATATTATTACAGGAAGGAAGAGAAGCTCTTGATTTCCGACTTTGTGGATAATGGGAGTTTGGCCAGCCATCTGCATGGGAACCACAACCTGGAGGAGGCAGGGCTGGATTGGGCAACTAGATTGAAGATCATCAGAGGAATAGCAAGAGGGTTGTCTTACTTGTACACATCGCTGCCAAACATAGTAGCAGCACATGGGCATTTGAAATCTTCAAATGTGTTACTAGACGAGTCGATGGAGCCTCTGCTGACGGATTACGGTCTAAGCCCAGTAGCGAACCTAGAGCAGGGGCAGAGCCTGATGATGGCCTACAAATCCCCAGAGTACGCCCAAATGGGGCGCATAACCAAGAAAACGGACGTGTGGAGCTTCGGAATTGTGATTCTGGAGATGTTGACGGGTAGGTTCCCAGAGAATTACCTAACTCGGAATCACGACACCAAAGTTGACCTGGCGGGTTGGGTCAACAACATGATCAAGGAAAAGAAGACCCCGCAAGTGTTCGACGCAGAGCTAGGGCGAGCCAGGGAGAGCAATAAAGGCGAGTTGCTGAAGATGCTTAAGATTGCATTGAGTTGTTGCGAGGAAGATGTGGATAGAAGGTTGGATCTCAATCAAGTAGTCGCACAAATTGAAGACTTGAACGATGCAGATTTTAGTGATAATGATGATGGAGATAACTTCTCCCCCACTTCTCGCCATTCTCAAATTCCTGTTTGA 1986 47.23 MPTGVRVVGLMRAPAPTISAASLILFFFLLLSSSCIMVVLSASDAETLLQFKRSLTSAVALNNWNPSVPPCENNKANWAGVLCLNGHVRGLRLENMGLKGEVDVNSLVSMTRLRTLSFMNNTLVGGWPRVISKLGSLRSVYLSYNHFSGQIPDDAFAGMKFLKKVFLTNNEFNGPIPSSLASLSRLMELRLDGNKFKGQVPRFQIDTLKKLNVSNNELEGPIPSSLSHMDPSCFAGNRDLCGDPLPACGSAISSSGLLKIAVIVIILGLTLAVIAAIFIIMNLRKQPAAVQLGKGNPGIIIEEDQNKYMNNGKQMTAGAGAGDGYRSTESSVAQAPKRGAEHGKLLFVRDDREKFDLQDLLRASAEILGSGSFGSSYKATILCNAVVVKRYKHMNNVGREEFHEHMRRLGRLTHANLLPLVAYYYRKEEKLLISDFVDNGSLASHLHGNHNLEEAGLDWATRLKIIRGIARGLSYLYTSLPNIVAAHGHLKSSNVLLDESMEPLLTDYGLSPVANLEQGQSLMMAYKSPEYAQMGRITKKTDVWSFGIVILEMLTGRFPENYLTRNHDTKVDLAGWVNNMIKEKKTPQVFDAELGRARESNKGELLKMLKIALSCCEEDVDRRLDLNQVVAQIEDLNDADFSDNDDGDNFSPTSRHSQIPV 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 33691522 33695284 - CrPI670011_07g018330.1 Cre07g1833 504414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g1833 661 Pfam Protein tyrosine and serine/threonine kinase 366 632 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre07g1833 661 Gene3D Phosphorylase Kinase; domain 1 328 436 - -
Cre07g1833 661 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Cre07g1833 661 Gene3D Ribonuclease Inhibitor 157 249 IPR032675 -
Cre07g1833 661 SUPERFAMILY L domain-like 68 230 - -
Cre07g1833 661 Gene3D Transferase(Phosphotransferase) domain 1 437 646 - -
Cre07g1833 661 Pfam Leucine Rich Repeat 136 154 IPR001611 GO:0005515(InterPro)
Cre07g1833 661 Pfam Leucine Rich Repeat 208 229 IPR001611 GO:0005515(InterPro)
Cre07g1833 661 FunFam Pollen receptor-like kinase 1 437 647 - -
Cre07g1833 661 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 39 637 IPR046959 -
Cre07g1833 661 FunFam pollen receptor-like kinase 1 331 436 - -
Cre07g1833 661 Pfam Leucine rich repeat N-terminal domain 42 83 IPR013210 -
Cre07g1833 661 SUPERFAMILY Protein kinase-like (PK-like) 366 635 IPR011009 -
Cre07g1833 661 MobiDBLite consensus disorder prediction 638 661 - -
Cre07g1833 661 Gene3D Ribonuclease Inhibitor 43 156 IPR032675 -
Cre07g1833 661 ProSiteProfiles Protein kinase domain profile. 362 636 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre07g1833 661 MobiDBLite consensus disorder prediction 646 661 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre06g2277 Cre-Chr6:30701826 Cre07g1833 Cre-Chr7:33691522 7.50E-123 dispersed
Cre07g1833 Cre-Chr7:33691522 Cre08g1193 Cre-Chr8:25204233 3.10E-108 dispersed
Cre05g1050 Cre-Chr5:9722473 Cre07g1833 Cre-Chr7:33691522 1.30E-50 wgd
Cre07g1833 Cre-Chr7:33691522 Cre09g2306 Cre-Chr9:42322828 1.20E-51 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64292 PF07714 PK_Tyr_Ser-Thr 2.00E-30 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g1833 K28077 - csv:101203276 1116.68