Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g1836 ATGGGTACCCTCTGCCCTAAGAAATTCATCAACACCACAATCGATTACAATCTCTTCGATATAATTCCTACTTACCGCAACATCACCTTGCTATATTGCTCCTCTTCTCCTCTCGCCGGGCAATTTAACTGTCCTGGATATGAGTTCGGCTTCATTGAGGGGAGCCCCATAGGTCCTAGTCTCTGCAATGTTAGCGTGATCGTGCCGGTTTCTTTGAATTTCTTCCCGCCGGTGAGTGATATTGTGAACGCTACTGAGATGTCGATGGCCATCGACGAGGGATTTGAGGTGAGTTTGAAGGATGACGGCGGTGGATGTGGAATTTGTAAGCAGTCGGAGGGGGTTTGCGGTTACGATTTGAGTTCGAATCGGACGACTTGCTATTGTCGCGCCGGCGACTCTATTGATAACGGAGCTTGTAGGAGGCTTCCGGCCGGTGGAGGTCCGGCATCTTCTCCGGGTGGGAATGGATCTAAGAATACATCCCTGATAATAGGCCTTTCTATTGGAGGGGTAACTGTACTAGGCCTATGCTTAGGATGCTTTGCCTTCTACATTACACAACGCAGAAAAAAACATGTTATGAAGTTGAAAAGCAAAGATCTTTCTTCACCTCCTTCAAGTGGAGGCATTCTGACTCCCTCCACCTTTCGCTCTAATAGTATTCCTTCCTATCCTTATTCGAGATCTAATCTCGAAAACGGGAGCTCCTACTTTGGAGCTCAAATCTTTACCTATGCCGAACTCGTGGAAGCAACTCATAATTTTGACCGTTCAAGGGAGCTTGGAGATGGTGGTTATGGTACTGTGTACTCTGGAACACTTAGGGATGGAAGGATAGTTGCAGTAAAGCGGCTATACGAGAACAATTATAAACGCGTGGAACAGTTCACAAATGAAGTTGAGATTCTCTCAAAATTGCAACATCCGAACCTCGTGAAGCTTTACGGATGCACATCGAGACATAGCCGAGAACTCCTCCTTGTATATGAGTACATTCCTAATGGAACAGTGGCTGACCATCTTCATGGAAAACAAGCAAATTCAGGTCTCCTTAGTTGGTCTGTTAGGCTCAAGATTGCTATAGAGACAGCTAATGCACTGGCTTACCTCCATCGCAACGATATCATTCATCGTGATGTCAAGACCAATAACATTCTTCTTGACAACAACTTCAAAGTAAAAGTGGCTGATTTCGGCCTGTCACGGTTATTTCCCCTCGACGTTACTCATGTTTCAACTGCTCCGCAAGGGACACCAGGCTATGTTGATCCCGAATATTATCAATGCTACCAACTTACCGACAAGAGCGACGTGTATAGCTTTGGAGTTATTTTGGTTGAGCTTATATCGTCGCTGCAGGCAGTTGACATCAACAGGAACAGAAATGATATCAATTTGTCAAATATGGCTATTGATAGAATTCAAAATCATGCATTGGCTGATTTAGTTGATCCAGATCTTGGGTTTGATAGGGATTATGCAGTAAGGTGTATGATAAAGTCAGTGGCAGAGTTGGCTTACCGATGTCTTCAACAGACAAGGGATGTGAGGCCTTCTATGGATGAAGTGCTGGAAATTCTAAAAGAATTAGAGAATGAAGAACTGACTGCTCGTAAAGCAGAAGTGCTAGATATAGGGTCTGATAATGTGAGACTTTTAAGGAATACATCATCTCTGCTTTCACCAGATTCTGCACCAGTGACAGATAAATGGGTGAAGGTCTTGAACAGAACAACTTAA 1743 44.23 MGTLCPKKFINTTIDYNLFDIIPTYRNITLLYCSSSPLAGQFNCPGYEFGFIEGSPIGPSLCNVSVIVPVSLNFFPPVSDIVNATEMSMAIDEGFEVSLKDDGGGCGICKQSEGVCGYDLSSNRTTCYCRAGDSIDNGACRRLPAGGGPASSPGGNGSKNTSLIIGLSIGGVTVLGLCLGCFAFYITQRRKKHVMKLKSKDLSSPPSSGGILTPSTFRSNSIPSYPYSRSNLENGSSYFGAQIFTYAELVEATHNFDRSRELGDGGYGTVYSGTLRDGRIVAVKRLYENNYKRVEQFTNEVEILSKLQHPNLVKLYGCTSRHSRELLLVYEYIPNGTVADHLHGKQANSGLLSWSVRLKIAIETANALAYLHRNDIIHRDVKTNNILLDNNFKVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYYQCYQLTDKSDVYSFGVILVELISSLQAVDINRNRNDINLSNMAIDRIQNHALADLVDPDLGFDRDYAVRCMIKSVAELAYRCLQQTRDVRPSMDEVLEILKELENEELTARKAEVLDIGSDNVRLLRNTSSLLSPDSAPVTDKWVKVLNRTT 580
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 33743065 33748624 - CrPI670011_07g018360.1 Cre07g1836 504417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g1836 580 Coils Coil 521 541 - -
Cre07g1836 580 SUPERFAMILY Protein kinase-like (PK-like) 237 532 IPR011009 -
Cre07g1836 580 Gene3D Phosphorylase Kinase; domain 1 229 332 - -
Cre07g1836 580 FunFam Wall-associated receptor kinase-like 20 333 541 - -
Cre07g1836 580 CDD STKc_IRAK 262 531 - -
Cre07g1836 580 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 233 332 - -
Cre07g1836 580 Pfam Wall-associated receptor kinase C-terminal 61 131 IPR032872 -
Cre07g1836 580 SMART serkin_6 256 527 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre07g1836 580 ProSitePatterns Protein kinases ATP-binding region signature. 262 284 IPR017441 GO:0005524(InterPro)
Cre07g1836 580 ProSiteProfiles Protein kinase domain profile. 256 536 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre07g1836 580 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 11 573 IPR044652 GO:0004672(InterPro)|GO:0016301(PANTHER)|GO:0016310(PANTHER)
Cre07g1836 580 Pfam Protein kinase domain 257 526 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre07g1836 580 ProSitePatterns Serine/Threonine protein kinases active-site signature. 376 388 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre07g1836 580 Gene3D Transferase(Phosphotransferase) domain 1 333 545 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre04g1265 Cre-Chr4:31379013 Cre07g1836 Cre-Chr7:33743065 1.30E-77 dispersed
Cre05g2428 Cre-Chr5:35704397 Cre07g1836 Cre-Chr7:33743065 4.40E-123 dispersed
Cre07g1836 Cre-Chr7:33743065 Cre08g1487 Cre-Chr8:27685260 1.00E-83 dispersed
Cre07g1836 Cre-Chr7:33743065 Cre11g1222 Cre-Chr11:10355866 1.30E-158 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64293 PF00069 Pkinase 1.80E-50 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g1836 - - - 0.0