Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre07g1880 | ATGTCTTTAGAGCTTTGGTTTCTTGATCGAAAATCTTGCCTCGTTGTTTCCGGTGGACGGACTTTTGCTCTAAACTTCGTCGGAATGATTGCGAGCTCTCTTTGCAATGCTTCCGCTAAATTCCCGGCAGAAGTGATGGACGTAGAAACGATGATGGAACAGAAGAGGAGTCTATGCTCTGTTGATGAGAGCGCTCTCACTTCTCTTACATCCAAGCGACCCAAGACTGATTTCTCTATCTCCTCTAAGGAGAGGAAAGACAAACTGGGTGAACGAATTATGGCCTTGCAACAACTTGTTTCACCATACGGAAAGACAGATACGGCATCTGTTCTTCTGGAGGCAATGGAATATATCCAATTCCTTCACGAGCAAGTCAAGGTGTTGAGTGCTCCATATCTCCAAAGCACACCCACTGTTTTGTTGCAGGAGCTGGAGGCATGCAGCCACAGCCTGAGGAGCAGAGGCCTATGTCTTGTTCCAATCTCGTGTACTGCTGGAGTTGCGCGCAGCAACGGTGCAGATATTTGGGCTCCTGTGAAGACAATTTCCCCCAAATTTGAGAAGCCTATCTCACCATTCAATTGA | 588 | 47.11 | MSLELWFLDRKSCLVVSGGRTFALNFVGMIASSLCNASAKFPAEVMDVETMMEQKRSLCSVDESALTSLTSKRPKTDFSISSKERKDKLGERIMALQQLVSPYGKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVLLQELEACSHSLRSRGLCLVPISCTAGVARSNGADIWAPVKTISPKFEKPISPFN | 195 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 34222132 | 34226994 | + | CrPI670011_07g018800.1 | Cre07g1880 | 504461 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre07g1880 | 195 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 73 | 122 | IPR011598 | GO:0046983(InterPro) | |
Cre07g1880 | 195 | Gene3D | - | 70 | 140 | IPR036638 | GO:0046983(InterPro) | |
Cre07g1880 | 195 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 72 | 166 | IPR045843 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER) | |
Cre07g1880 | 195 | CDD | bHLH_AtbHLH_like | 79 | 130 | IPR045239 | - | |
Cre07g1880 | 195 | FunFam | Transcription factor bHLH113 family | 72 | 148 | - | - | |
Cre07g1880 | 195 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 78 | 136 | IPR036638 | GO:0046983(InterPro) | |
Cre07g1880 | 195 | SMART | finulus | 81 | 128 | IPR011598 | GO:0046983(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre07g1880 | Cre-Chr7:34222132 | Cre11g0574 | Cre-Chr11:2862151 | 5.50E-21 | dispersed | |
Cre07g1880 | Cre-Chr7:34222132 | Cre10g0804 | Cre-Chr10:8059872 | 2.80E-25 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre07g1880 | - | - | - | 0.0 |