Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g1913 ATGCAAGAAGCTTTTCTTAATTTGTATTTAACAATGGCGGTTGGGAGTACTGTATCAGTTTTCTGCTCTTCTTCCTTAACTCTTCTTCTTCTTCTTCTTCTGCTGCTCGTATTTCCATTTGGGTCTAATTCTGAGGATCTAAAAGCTTGCAAGTTTGATGCCATATTTCAGTTTGGGGATTCCTTAGCTGACACTGGAAATCTGATACGAGAGAACCCTTCAACTCCTTTTTCTCATCTTCCTTATGGCGAAACGTTCTTTAAGAAAGCCACTGGAAGATGTTCTAATGGCTTACTTATGGTCGATTACTTTGCTTTGGCAGCGGGGCTTCCTTTAGTGAATCCCTACTTGAAAAAGAAGGCATCTTTTACTCATGGAGTGAATTTTGCAGTGGCTGGCTCTACTGCTTTGCCTTTGAATGTTCTTACTCAAAACAACATCTCATCTCCGGTTACCAACACATCTTTGAGTAAACAACTTGAATGGATGCATTCATATCTAAATACTATTTGTTCTAACAAAAGAGATTGTACTAAGAAGTTAAAGCATGCATTATTTTTTATGGGGGAGATTGGAGGGAATGATTATAACTATGCTCTATTTGAAGGCAAAACTGTTGCTGAAGTAAAAAATATGGTACCTGGAGTTGTACAAACAATAATAGATGCTACTAGAAGGGTCATCGATTATGGTGCTACTCGAGTTATTATTCCAGGACATTTCTCAATGGGTTGCCTACCAATCTACCTCACTGGCTTTCAAACCAATGATTCAACTGCTTATGACAAGTTTCACTGTTTAAAGGATTTCAACGGTTTAGCAAGTTATCATAATAACAAATTGAAGCAAGCTATCAAGCTGTTGAGAACAGAGAATCCTATCACCATAATTACATATGGTGATTATTATAATGCATTATTTTGGATTTTTCGACATGCTTCTTTGCTTGGATTTGATAAAACATCCCTACAAAAGTCTTGTTGCGGAACAGGAGGGTCTCAAGGCCTTGAAGTCTCAGCTCAGGGGCTTGGGTGCATGGGCATGTCCTCATACTACGGCCCTGCTCAGCCACAAGAAGACATGATTGCCCTCATCCACCGCGCCGTCGAGGCCGGGGTCACCTTCTTGGATACCTCAGACATATACGGCCCTTTCACCAACGAGACCCTCCTTGGAAAGGCTCTTAAGGCCGATGGGGTTAGGGACAAGGTTCAGTTGGCTACCAAATTTGGGCTCCATCTCGCCCACGGTAACTTCGAGGTCCACGGCCATCCGGCCTATGTTAGGGCCGCGTGTGAGGCCAGCTTGGACCGCCTTGGGGTTCATTGTATCGATCTCTATTATCAGCATCGGATCGATACTAAAGTTCCCATTGAAATCACGATTGGGGAGCTGAAGAAATTGGTTGAAGAAGGGAAAATAAAGTACATAGGTTTATCTGAAGCTTCAGCCTCTACCATTAGAAGAGCTCATGCAGTTCATCCAATTACAGCAGTTCAAATCGAATGGGAACTGGGCATTGGAATTGTGGCATACAGTCCTCTGGGAAGGGGTTTCCTATCTTCTGGGGCCAACTTCATTGAAAACTTAACAGATGATGACTACAGAAAGAAACTCCCTCGATTTCAACCCGAAAACTTGGAGCACAACAAGCGCATATTCGAGAAGGTTAGCGAATTGGCAGCTAGAAAAGGGTGCACCACATCTCAGCTAGCCTTAGCATGGGTTCACCACCAAGGGACCGATGTGGTTCCAATTCCTGGAACCACTAAGCTTAAAAATCTGCAATCAAACATTGAAGCTTTGTCATTGAAACTTACACCACAAGAAATGGCTGAACTTGAAGCCTATGCTTTAGCTGATGGAGTTAAAGGAGACAGATATGGTGAGGACATTTCCACTTGGAAACAATCTGAAACCCCACCACTTTCTTCATGGAAATTTTGA 1947 42.53 MQEAFLNLYLTMAVGSTVSVFCSSSLTLLLLLLLLLVFPFGSNSEDLKACKFDAIFQFGDSLADTGNLIRENPSTPFSHLPYGETFFKKATGRCSNGLLMVDYFALAAGLPLVNPYLKKKASFTHGVNFAVAGSTALPLNVLTQNNISSPVTNTSLSKQLEWMHSYLNTICSNKRDCTKKLKHALFFMGEIGGNDYNYALFEGKTVAEVKNMVPGVVQTIIDATRRVIDYGATRVIIPGHFSMGCLPIYLTGFQTNDSTAYDKFHCLKDFNGLASYHNNKLKQAIKLLRTENPITIITYGDYYNALFWIFRHASLLGFDKTSLQKSCCGTGGSQGLEVSAQGLGCMGMSSYYGPAQPQEDMIALIHRAVEAGVTFLDTSDIYGPFTNETLLGKALKADGVRDKVQLATKFGLHLAHGNFEVHGHPAYVRAACEASLDRLGVHCIDLYYQHRIDTKVPIEITIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQIEWELGIGIVAYSPLGRGFLSSGANFIENLTDDDYRKKLPRFQPENLEHNKRIFEKVSELAARKGCTTSQLALAWVHHQGTDVVPIPGTTKLKNLQSNIEALSLKLTPQEMAELEAYALADGVKGDRYGEDISTWKQSETPPLSSWKF 648
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 34623258 34630214 + CrPI670011_07g019130.1 Cre07g1913 504494

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g1913 648 CDD SGNH_plant_lipase_like 54 332 IPR035669 -
Cre07g1913 648 Gene3D - 330 644 IPR036812 -
Cre07g1913 648 SUPERFAMILY NAD(P)-linked oxidoreductase 332 620 IPR036812 -
Cre07g1913 648 Pfam Aldo/keto reductase family 343 616 IPR023210 -
Cre07g1913 648 PANTHER AFLATOXIN B1 ALDEHYDE REDUCTASE 332 628 IPR050791 GO:0004033(PANTHER)|GO:0005737(PANTHER)
Cre07g1913 648 Pfam GDSL-like Lipase/Acylhydrolase 55 339 IPR001087 GO:0016788(InterPro)
Cre07g1913 648 CDD AKR_AKR13D1 332 614 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g1913 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g1903 Cre-Chr7:34492224 Cre07g1913 Cre-Chr7:34623258 1.50E-138 dispersed
Cre07g1913 Cre-Chr7:34623258 Cre10g0356 Cre-Chr10:2369994 3.70E-122 dispersed
Cre07g1913 Cre-Chr7:34623258 Cre04g1972 Cre-Chr4:37149130 8.20E-53 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g1074 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone15ag0623 . . . . . . Blo02g00409 . . Bda13g00295 . . . . . . . . . . . . . . . . . . . . Cla07g01481 Cam07g1578 Cec07g1677 Cco07g1638 Clacu07g1569 Cmu07g1537 Cre07g1913 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0016358 0 0 0 0 0 1 0 1 1 0 1 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 8