Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g1947 ATGATTATGGCTCTTCCCATTTCCAGATTACCCTCTCTCTTTCCCCTTCTACCCATTTTTCTTGCCTTCTCTACCTTTCTTGTTTCAACAGAAGCATATGATCCACTTGATCCAAATGGAAACATTACTATCAAATGGGATATTATGAGCTGGACTGCTGATGGATATGTTGGTGTTGTTACCCTGTATAATTTCCAACAATACCGGCATATTCAAACACCGGGATGGTCTCTCCAATGGAAATGGGCAAAGAAAGAGGTCATATGGAACATGTTGGGAGGCCAAGCAACAGAGCAAGGTGATTGTTCTAGATTTAAAGGGAACATCCCCCATTGCTGCAAGAGGGATCCAACAGTTGTTGACCTATTGCCTGGAACTCCTTATAACCAGCAGATTGCAAATTGCTGCAAAGGTGGAGTTCTTAACTCCTGGGTGCAAGATCCAGCTACTGCAGTGAGCTCATTTCAGCTCACCGTTGGTTCAGCCGGAACCTCGAATAAAACTGTTCGACTGCCAAAGAACTTTACCTTAAAAGCACCTGGACCTGGTTATACCTGTGGACCGGCCAAAATTGTTAAACCGAGCAAATTCGTTTCCCCCGACAAACGGAGAGTTACACAGGCATTGATGACATGGAATGTTACATGCACATATTCACAATTTCTGGCCCAAAAAACTCCTACTTGCTGTGTCTCGCTGTCGTCATTTTACAACGACACAATTGTTTCTTGCCCGAAGTGCTCTTGTGGCTGCCAAGGCAACTTGAATGCACCCCAAAGTTGTGTGGAGCCAAATTCTCCGTATTTAGCCTCTGTTGTTAGCAGTGCTAGTTCTAGCAAGAGCAATTTGACACCATTGGTTCAGTGTACTGGCCATATGTGCCCGATTCGAGTTCACTGGCATGTGAAGCTTAACTATAAGGAGTATTGGAGGGTGAAGATCACAATTACAAACTTCAATTACATGATGAATTATACAAATTGGAACTTAGTTGTTCAACATCCGAACTTCGACAATCTAACACAGATTTTCAGCTTCAACTACCAGTCAATCAATCCGTATGGAACAATAAATGATACTGCAATCCTGTGGGGAGTCAAGTTCTACAACGATTTGCTCATGCAAGCAGGTCCTCTTGGGAATGTGCAGACAGAGCTACTATTCCGGAAGGATCAATCGACTTTCACATTTGACAAAGGCTGGGCTTTTCCTCGGAGGATCTATTTTAATGGCGACAATTGTGTTATGCCACCTCCGGAAGCCTATCCCTACTTACCAAACACAGGTTCTAAGCAAGATGTCTCGATGTTTACTATGCTATTGCTGATTTCCTTGACTCTCTTGTCCTTCCACCATTCGTTTGCATAA 1368 43.42 MIMALPISRLPSLFPLLPIFLAFSTFLVSTEAYDPLDPNGNITIKWDIMSWTADGYVGVVTLYNFQQYRHIQTPGWSLQWKWAKKEVIWNMLGGQATEQGDCSRFKGNIPHCCKRDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPATAVSSFQLTVGSAGTSNKTVRLPKNFTLKAPGPGYTCGPAKIVKPSKFVSPDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVSCPKCSCGCQGNLNAPQSCVEPNSPYLASVVSSASSSKSNLTPLVQCTGHMCPIRVHWHVKLNYKEYWRVKITITNFNYMMNYTNWNLVVQHPNFDNLTQIFSFNYQSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKDQSTFTFDKGWAFPRRIYFNGDNCVMPPPEAYPYLPNTGSKQDVSMFTMLLLISLTLLSFHHSFA 455
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 34884676 34887570 + CrPI670011_07g019470.1 Cre07g1947 504528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g1947 455 PIRSF COBRA 7 455 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Cre07g1947 455 Pfam COBRA-like protein 56 219 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Cre07g1947 455 PANTHER PROTEIN COBRA 22 444 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)|GO:0046658(PANTHER)|GO:0052324(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre06g2414 Cre-Chr6:32022807 Cre07g1947 Cre-Chr7:34884676 5.10E-219 dispersed
Cre07g1947 Cre-Chr7:34884676 Cre07g1948 Cre-Chr7:34888111 1.20E-183 tandem
Cre02g0786 Cre-Chr2:4707380 Cre07g1947 Cre-Chr7:34884676 2.50E-117 transposed
Cre05g0778 Cre-Chr5:6858071 Cre07g1947 Cre-Chr7:34884676 4.80E-37 transposed
Cre10g0772 Cre-Chr10:7555809 Cre07g1947 Cre-Chr7:34884676 1.10E-28 transposed
Cre01g1500 Cre-Chr1:28234470 Cre07g1947 Cre-Chr7:34884676 6.70E-154 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g1947 - - - 0.0