Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g1973 ATGTCGCCTGTTGATTCTTCACGGGAGGAAAATGTTTACATGGCCAAGTTGGCCGAACAGGCTGAACGATATGAGGAAATGGTAGAGTTCATGGAGAAAGTTGCCAAGACTGTGGATGTCGAGGAGCTGACTGTTGAGGAGAGGAATCTCCTCTCTGTTGCTTACAAGAATGTCATTGGGGCTCGGAGGGCCTCATGGAGGATTATTTCTTCCATTGAGCAGAAGGAAGAGAGTCGGGGAAATGAGGACCATGTTGCAATTATCAAGGATTACCGTGGCAAAATCGAGACTGAACTGAGCAAGATTTGTGATGGAATTTTGAGCCTACTTGAGTCTCATCTCATCCCATCAGCCTCATCTGCTGAGTCAAAGGTGTTTTATCTCAAAATGAAAGGTGATTACCACAGGTACCTGGCTGAGTTTAAGACTGGAGCTGAACGAAAAGAAGCAGCTGAGAGCACATTGTTAGCCTACAAGTCTGCTCAGGATATTGCTCTTGCCGAATTGGCTCCTACTCATCCAATTAGGCTAGGTCTTGCTCTTAACTTCTCAGTGTTTTATTATGAGATCCTTAATTCGCCAGACCGTGCTTGCAATTTGGCAAAGCAGGCTTTTGACGAAGCAATTTCTGAGCTTGATACATTGGGTGAAGAATCATACAAGGATAGCACCTTGATCATGCAACTCCTCCGAGACAACTTGACCCTTTGGACTTCTGATATTGGGGACGAAGCTGGCGATGAGATTAAGGAAGCATCAAAACGTGAATCAGGGGAGGGACAGTAG 786 45.55 MSPVDSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAIIKDYRGKIETELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDIGDEAGDEIKEASKRESGEGQ 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 35160388 35161982 + CrPI670011_07g019730.1 Cre07g1973 504554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g1973 261 FunFam 14-3-3 protein epsilon 4 251 - -
Cre07g1973 261 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Cre07g1973 261 Coils Coil 14 34 - -
Cre07g1973 261 PIRSF 14-3-3 3 250 IPR000308 -
Cre07g1973 261 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Cre07g1973 261 PANTHER 14-3-3 PROTEIN 7 243 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Cre07g1973 261 SMART 1433_4 8 251 IPR023410 -
Cre07g1973 261 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Cre07g1973 261 Gene3D - 2 251 IPR036815 -
Cre07g1973 261 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Cre07g1973 261 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Cre07g1973 261 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Cre07g1973 261 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Cre07g1973 261 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Cre07g1973 261 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Cre07g1973 261 Pfam 14-3-3 protein 14 238 IPR023410 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g1973 Cre-Chr7:35160388 Cre11g1846 Cre-Chr11:30105296 3.20E-117 dispersed
Cre07g1973 Cre-Chr7:35160388 Cre08g1063 Cre-Chr8:23757153 1.60E-119 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g1973 K06630 - csv:101222068 501.901