Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g1994 ATGTTTCTATTGTTTTTGTCTCCTTCATTATCCCTCGAGTCACGGCTCGCACCTCACAGGTCCCAGCCTCCATCTCCTTCTCCAGTTCTGTCGCACTTTCTCCTTCTCTTTCTCAGCACAACACCTTTCTCCTTCTCTTCATCTTCACTTCGTTTTCGGCTCCCACTCCCATCTCCGATTCGCACCTCAGTCAGCCACCGGCACCGCCATCTTCCGTCTCACTCAGACAATAAGGAAGGAATGGGTGCTCAGAGAAAGGGAGCATCGCGGGTCTCCGAGGACCCCGAGGAGCTGGCACGAGTTTCGTTGCAGGCTGTTCTCCTTGCCGATAGCTTTACTACTAAGTTTCGCCCCATTACACTTGAACGCCCCAAGGTATTACTGCCGCTCGTAAATGTCCCAATGATTAATTATACCTTATCTTGGCTCGAATCGGCTGGTGTTGAAGAGGTGTTTGTATTTTGCTGTGCTAACTCGAAGCAAGTAATTGATTATTTGGAGAACTCTGAGTGGGTATCCCTACCAGACTTTGCAGTCACAACTATAGAGTCGCACAACTCCATTAGTGCTGGAGATGCCTTGCGTTTGATCTACGAAAGAAATGTGATACATGGTGATTTTGTACTTATCACTGGAGACACCATAAGCAACATGTCACTTACGCAAGCTCTTCAAGAACACAAAGAGAGAAAGAAGAAAGATAGTAATGCCGTAATGACTATGGTTGTCAAACGGTCAAAGCCTTCTCCTATCACTCACCAATCTCGGCTTGGCACCGACGAACTATTTATGGCAATTGATCACAATACTAAGCAGCTCTTGTACTATGAGGATAAGGTTGACCATTCAAAAGGAATTATACATCTGGACAAGTCATTGCTAATGGATAATCCTTCCATATCACTTCATAACGACATGCAGGATTGTTACATAGACATATGCTCCCCAGAAGTACTCAGTTTGTTTACTGACAATTTTGACTACCAACATCTACGTCGTCATTTTGTGAAGGGCTTGCTCTTAGATGATATCATGGGTTACAAGATTTACACACATGAAATTTGCTCAAGCTATGCAGCTAGAATTGATAATTATCGAAGCTATGACACCGTTAGTAAGGACATAATACAAAGGTGGACATATCCACTGGTACCTGATGTTAAATTCTTTGGGAATTCTGCTTATAAACTTGAAAGGCAGGGAATGTATCGAGCATCAGATATACTGCAGGCACGCTCTGCACAGGTTGGTCCGTTTACTGTTATTGGAGATAACAGCAAAATTGGTGGTAACACCAAAATTACGAATTCAATTATTGGGCAAGGGTGTAATATTGGATCAAATGTTACAATTGAAGGCTCTTATATATGGGACAATGTGACCATTGAAGATGGCTGTAAACTCAGTCATGCTATCGTATGTGATGGAGTTGTCATAAAGTCAGGAGCAGAACTGGAACCTGGTGTAATTTTGTCTTTCAAGGTTGTTGTGGGGGATCAATTTACCGTTCCATCATATTCAAAGGTATCTTTGTTTCAGCAGCCAACCAATCAAGATAGTGATGAGGAGCTGGAATATGCAGATAATAGCAGTGGCATTGTAGAATTTGCAGATACAACAGACAAGTCAAATAGTGCAATGATGTCCAAATCGCTGGAAATGCAAGGCTGGCCTGCATCTGAGCTAGGCAAGGGAGGTCTAGGACATGTTTGGTCAATTTGTGAAGGAAGCCTCGAAGAAGAATGGAGGCACTCAGTTGCACCCATTCCTGCCGATAAACTTGAGAAGGTTCTGCATAAAGCAACAGATGATGAGCTGGAGTTAACTCAAGATGCTAATGTTTTACCACCTTCAGGGGAGTTGAAGTCCGACTCATACGTCTCAGATGGTGATGATAACGAAAGCTCTAGAGATGACTCCTTCCACTTTGAGAAAGAGGTTGAAGCAACATTTCTGAGGGCTGTGCATGAAAATATTGAAGTAGCCAATGTAATTTTGGAAGTGAATTCATTGCGGTTGTCATATAATAAGGTAGCTTCAGATTGTGCAGGAGCAATATTTTATTCTCTGATGAACTTTGCCTTAGATGCTCCACATGGTTCATCTAGTGAACTACTGCAAAATACTACAAATATAATTACGAAATGGAAAAAACTTTTGAAGTACTACCTAACCGACTTGGATGAAGAGATTGAAGTGATATTAAAATTTGAAGAGATATGCCTGGAATCTGCCAAGGAATTCACTCCACATTTTACTAAGATTTTGTGGCATCTATATGACCAAGAAATCATTCAAGAAGAGGCTATTCTGAAGTGGGATGCTGAGAAAAAGGAAGCGGATGATTCAGATAAGCTTTTCGTGAAGCAGGCCGAAAAATTCATTGAATGGTTAAAAGTTGCACCAGAGGAAGAGGAAGAAGAGGAAGAGGAGGATGAATAG 2442 42.06 MFLLFLSPSLSLESRLAPHRSQPPSPSPVLSHFLLLFLSTTPFSFSSSSLRFRLPLPSPIRTSVSHRHRHLPSHSDNKEGMGAQRKGASRVSEDPEELARVSLQAVLLADSFTTKFRPITLERPKVLLPLVNVPMINYTLSWLESAGVEEVFVFCCANSKQVIDYLENSEWVSLPDFAVTTIESHNSISAGDALRLIYERNVIHGDFVLITGDTISNMSLTQALQEHKERKKKDSNAVMTMVVKRSKPSPITHQSRLGTDELFMAIDHNTKQLLYYEDKVDHSKGIIHLDKSLLMDNPSISLHNDMQDCYIDICSPEVLSLFTDNFDYQHLRRHFVKGLLLDDIMGYKIYTHEICSSYAARIDNYRSYDTVSKDIIQRWTYPLVPDVKFFGNSAYKLERQGMYRASDILQARSAQVGPFTVIGDNSKIGGNTKITNSIIGQGCNIGSNVTIEGSYIWDNVTIEDGCKLSHAIVCDGVVIKSGAELEPGVILSFKVVVGDQFTVPSYSKVSLFQQPTNQDSDEELEYADNSSGIVEFADTTDKSNSAMMSKSLEMQGWPASELGKGGLGHVWSICEGSLEEEWRHSVAPIPADKLEKVLHKATDDELELTQDANVLPPSGELKSDSYVSDGDDNESSRDDSFHFEKEVEATFLRAVHENIEVANVILEVNSLRLSYNKVASDCAGAIFYSLMNFALDAPHGSSSELLQNTTNIITKWKKLLKYYLTDLDEEIEVILKFEEICLESAKEFTPHFTKILWHLYDQEIIQEEAILKWDAEKKEADDSDKLFVKQAEKFIEWLKVAPEEEEEEEEEDE 813
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 35422456 35436052 - CrPI670011_07g019940.1 Cre07g1994 504575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g1994 813 CDD eIF-2B_epsilon_N 103 319 IPR035543 -
Cre07g1994 813 MobiDBLite consensus disorder prediction 64 93 - -
Cre07g1994 813 FunFam Trimeric LpxA-like enzyme 396 529 - -
Cre07g1994 813 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 91 812 IPR051956 GO:0003743(PANTHER)|GO:0005085(PANTHER)|GO:0005851(PANTHER)|GO:0031369(PANTHER)
Cre07g1994 813 FunFam Translation initiation factor eIF-2B epsilon subunit 633 811 - -
Cre07g1994 813 Gene3D Hexapeptide repeat proteins 400 509 - -
Cre07g1994 813 CDD W2_eIF2B_epsilon 638 799 IPR044123 GO:0005085(InterPro)|GO:0031369(InterPro)
Cre07g1994 813 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 91 383 IPR029044 -
Cre07g1994 813 Pfam Bacterial transferase hexapeptide (six repeats) 420 453 IPR001451 -
Cre07g1994 813 SMART 542_3 717 804 IPR003307 GO:0005515(InterPro)
Cre07g1994 813 SUPERFAMILY ARM repeat 643 799 IPR016024 -
Cre07g1994 813 ProSiteProfiles W2 domain profile. 637 808 IPR003307 GO:0005515(InterPro)
Cre07g1994 813 MobiDBLite consensus disorder prediction 608 639 - -
Cre07g1994 813 FunFam Translation initiation factor eIF-2B subunit epsilon 92 383 - -
Cre07g1994 813 SUPERFAMILY Nucleotide-diphospho-sugar transferases 102 449 IPR029044 -
Cre07g1994 813 MobiDBLite consensus disorder prediction 69 93 - -
Cre07g1994 813 SUPERFAMILY Trimeric LpxA-like enzymes 347 509 IPR011004 -
Cre07g1994 813 CDD LbH_eIF2B_epsilon 421 499 - -
Cre07g1994 813 Gene3D - 631 812 - -
Cre07g1994 813 Pfam eIF4-gamma/eIF5/eIF2-epsilon 729 808 IPR003307 GO:0005515(InterPro)
Cre07g1994 813 Pfam Nucleotidyl transferase 105 248 IPR005835 GO:0009058(InterPro)
Cre07g1994 813 MobiDBLite consensus disorder prediction 625 639 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g1994 K03240 - csv:101217025 1356.27