Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g2013 ATGAAATTTTCAGTTTCTCCCATTTTCAAATCCCCCGCCATTATTTCCCCCAGATTCTTCTTCTCCACCGCCATGTCCACTTCCGATCACTCTCCCCCTGCCTTCGACCGACCTCGCTCCGTCATCAAGAAGATTCTTGCTAAACTCCAGCACGAAGGCGACGGCGCCGTCGTTCGTCGAGGCATCGGAAGGAATGATTTGAAGAATCTAGATCCATTTCTTATGCTCGATGATTTCTCTGTCAGTCCGCCGGCTGGATTCCCCGATCATCCTCACAGAGGTTTTGAGACAGTGACGTACATGTTACAGGGAGGGATTACCCATCAAGATTTTGCTGGCCACAAGGGTACAATCAGAACAGGGGATGTCCAGTGGATGACAGCAGGAAGAGGTATAATTCATTCAGAAATGCCTGCTGGTGAAGGATCTCAAAAGGGTTTGCAGCTTTGGATCAATCTTGCATCCCATGACAAAATGATGGAGCCAAGGTATCAAGAGATCTCAAGCGACAACATTCCAAGAGCGGAGAAAGACGGTGTGGAAGTTCGTGTCATAGCAGGAGAGTCTATGGGAGTTCATTCTCCAATCTACACTAGAACTCCAACTATGTACCTTGACTTTACTTTGAAACCAAGAGCTCAAGTGCATCAAAGCATTCCAGACTCGTGGACGTCTTTCGTGTACATAATCGACGGGGAAGGAGTGTTCGGGTCGCCGAACTCATCGCGGGTGGTGGCTCACCATGTTCTAGTATTGGGAGGTGGAGATGGGATAAGTGTGTGGAACAGATCTTCAAAACCATTGAGGTTTGTTTTGATTGCAGGGAAGCCCTTGAATGAGCCAATTGTTCAATATGGACCATTTGTTATGAACTCACAATCTGAAATTGACAAAGCAATTGAGGACTATCACTATTCCAAAAATGGGTTTGAAATGGCAAAGTATTGGAGATCTCAGTGA 960 46.46 MKFSVSPIFKSPAIISPRFFFSTAMSTSDHSPPAFDRPRSVIKKILAKLQHEGDGAVVRRGIGRNDLKNLDPFLMLDDFSVSPPAGFPDHPHRGFETVTYMLQGGITHQDFAGHKGTIRTGDVQWMTAGRGIIHSEMPAGEGSQKGLQLWINLASHDKMMEPRYQEISSDNIPRAEKDGVEVRVIAGESMGVHSPIYTRTPTMYLDFTLKPRAQVHQSIPDSWTSFVYIIDGEGVFGSPNSSRVVAHHVLVLGGGDGISVWNRSSKPLRFVLIAGKPLNEPIVQYGPFVMNSQSEIDKAIEDYHYSKNGFEMAKYWRSQ 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 35689984 35692207 + CrPI670011_07g020130.1 Cre07g2013 504594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g2013 319 CDD cupin_pirin_C 201 277 - -
Cre07g2013 319 PIRSF Pirin 37 317 IPR012093 -
Cre07g2013 319 Gene3D Jelly Rolls 173 278 IPR014710 -
Cre07g2013 319 PANTHER PIRIN-RELATED 30 319 IPR012093 -
Cre07g2013 319 Pfam Pirin 58 151 IPR003829 -
Cre07g2013 319 CDD cupin_pirin_N 56 153 - -
Cre07g2013 319 Gene3D Jelly Rolls 52 304 IPR014710 -
Cre07g2013 319 Pfam Pirin C-terminal cupin domain 204 308 IPR008778 -
Cre07g2013 319 FunFam pirin 52 184 - -
Cre07g2013 319 SUPERFAMILY RmlC-like cupins 39 317 IPR011051 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g2013 Cre-Chr7:35689984 Cre10g0693 Cre-Chr10:6607628 1.40E-109 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g2013 K06911 - csv:101205861 617.461