Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g2031 ATGACCCAGTTGCTGAATCTAGCTCTTGGAGTGGTTTTAGTTGCAGTTTTGGTGATTTTCCTTCTCATCTTCTTGAACAGAAGGGGAAAGGGGAAGGATAATGATGAATACAATGACATAGAGAGAAAACAGGAGAGGGAGAAAGCGGAGGAAGAGAAAGAAGAATTGGTGAGTTTTCAAGGTGGACAGGACCTTACCATTGTGGATATTTTGGAAGCTCCTGGGGAAGTAATTGGGAAAGCCAACCATGGAACTTTGTATAAGGCTTATTTGCAAGGAAGCAACACAGTAAGGCTGCTAAGGTTTCTGAGGCCAGTTTGCACTGCTGGCCTTGAAGACTTTGTCAGTGAAATTGAGTTTTTAGGTTCCATAAGACACCCAAATTTGGTGCCTCTCTTGGGATTCTACTCAGGTCCAAGAGCAGAGAAGCTTCTCATTCATCCATTTTACAGGCGAGGAAATCTAGCTCAGTTCATTAGAGATGGGAATGGCGACTCACACCGATGGGGAGTTATAAACAAGATCTCGATTGGTATTGCGAAAGGATTGGATCATCTTCACACTGGCCTGCAAAAGCCAACAATCCATGGGAATCTTCAATCGAAAAATGTTCTTTTGGATAGGTATTATGAACCGTATGTCTCCGATTTCGGCCTACATCTACTGCTGAATTCCCCATCTGCCCAAGAGGTAGTTGAAGCTTCAGCAGCCAATGGCTACAAAGCTCCTGAGCTGATCAAGATGAAGGATGCAACTGAGGAGACTGACATCTATAGTTATGGGGTGATATTACTTGAGTTACTTTCGGGGAAGGAACCGATCAACGAAAAGCCAAATCCTGATGAGGATTTTTACTTGCCTAACTTTATGAGAAATGCTGTTCTTGGACATAGAATTGCAGATTTGTTCCATCCAGAAATACTTCTGTATAGCAGCATTGATGGAAATCATGTTACTGAAGAAAAGATTCTCAAGTTCTTTCAGCTTGCTATGGCTTGTTGTTCTCCTTCTCCTGCTCTTAGACCTAGTATGAAGCAAGTGCTACGGAAGCTCAATGAAATCGGAACGTAG 1071 42.76 MTQLLNLALGVVLVAVLVIFLLIFLNRRGKGKDNDEYNDIERKQEREKAEEEKEELVSFQGGQDLTIVDILEAPGEVIGKANHGTLYKAYLQGSNTVRLLRFLRPVCTAGLEDFVSEIEFLGSIRHPNLVPLLGFYSGPRAEKLLIHPFYRRGNLAQFIRDGNGDSHRWGVINKISIGIAKGLDHLHTGLQKPTIHGNLQSKNVLLDRYYEPYVSDFGLHLLLNSPSAQEVVEASAANGYKAPELIKMKDATEETDIYSYGVILLELLSGKEPINEKPNPDEDFYLPNFMRNAVLGHRIADLFHPEILLYSSIDGNHVTEEKILKFFQLAMACCSPSPALRPSMKQVLRKLNEIGT 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 35904775 35906046 - CrPI670011_07g020310.1 Cre07g2031 504612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g2031 356 Coils Coil 34 54 - -
Cre07g2031 356 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 7 355 IPR052451 -
Cre07g2031 356 SUPERFAMILY Protein kinase-like (PK-like) 75 351 IPR011009 -
Cre07g2031 356 Gene3D Transferase(Phosphotransferase) domain 1 151 356 - -
Cre07g2031 356 Gene3D Phosphorylase Kinase; domain 1 38 149 - -
Cre07g2031 356 ProSiteProfiles Protein kinase domain profile. 72 356 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre07g2031 356 Pfam Protein tyrosine and serine/threonine kinase 76 351 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g2031 Cre-Chr7:35904775 Cre09g0878 Cre-Chr9:8779490 7.20E-59 dispersed
Cre07g2031 Cre-Chr7:35904775 Cre09g2059 Cre-Chr9:39651786 3.80E-84 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64303 PF07714 PK_Tyr_Ser-Thr 9.10E-31 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g2031 - - - 0.0