Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre07g2031 | ATGACCCAGTTGCTGAATCTAGCTCTTGGAGTGGTTTTAGTTGCAGTTTTGGTGATTTTCCTTCTCATCTTCTTGAACAGAAGGGGAAAGGGGAAGGATAATGATGAATACAATGACATAGAGAGAAAACAGGAGAGGGAGAAAGCGGAGGAAGAGAAAGAAGAATTGGTGAGTTTTCAAGGTGGACAGGACCTTACCATTGTGGATATTTTGGAAGCTCCTGGGGAAGTAATTGGGAAAGCCAACCATGGAACTTTGTATAAGGCTTATTTGCAAGGAAGCAACACAGTAAGGCTGCTAAGGTTTCTGAGGCCAGTTTGCACTGCTGGCCTTGAAGACTTTGTCAGTGAAATTGAGTTTTTAGGTTCCATAAGACACCCAAATTTGGTGCCTCTCTTGGGATTCTACTCAGGTCCAAGAGCAGAGAAGCTTCTCATTCATCCATTTTACAGGCGAGGAAATCTAGCTCAGTTCATTAGAGATGGGAATGGCGACTCACACCGATGGGGAGTTATAAACAAGATCTCGATTGGTATTGCGAAAGGATTGGATCATCTTCACACTGGCCTGCAAAAGCCAACAATCCATGGGAATCTTCAATCGAAAAATGTTCTTTTGGATAGGTATTATGAACCGTATGTCTCCGATTTCGGCCTACATCTACTGCTGAATTCCCCATCTGCCCAAGAGGTAGTTGAAGCTTCAGCAGCCAATGGCTACAAAGCTCCTGAGCTGATCAAGATGAAGGATGCAACTGAGGAGACTGACATCTATAGTTATGGGGTGATATTACTTGAGTTACTTTCGGGGAAGGAACCGATCAACGAAAAGCCAAATCCTGATGAGGATTTTTACTTGCCTAACTTTATGAGAAATGCTGTTCTTGGACATAGAATTGCAGATTTGTTCCATCCAGAAATACTTCTGTATAGCAGCATTGATGGAAATCATGTTACTGAAGAAAAGATTCTCAAGTTCTTTCAGCTTGCTATGGCTTGTTGTTCTCCTTCTCCTGCTCTTAGACCTAGTATGAAGCAAGTGCTACGGAAGCTCAATGAAATCGGAACGTAG | 1071 | 42.76 | MTQLLNLALGVVLVAVLVIFLLIFLNRRGKGKDNDEYNDIERKQEREKAEEEKEELVSFQGGQDLTIVDILEAPGEVIGKANHGTLYKAYLQGSNTVRLLRFLRPVCTAGLEDFVSEIEFLGSIRHPNLVPLLGFYSGPRAEKLLIHPFYRRGNLAQFIRDGNGDSHRWGVINKISIGIAKGLDHLHTGLQKPTIHGNLQSKNVLLDRYYEPYVSDFGLHLLLNSPSAQEVVEASAANGYKAPELIKMKDATEETDIYSYGVILLELLSGKEPINEKPNPDEDFYLPNFMRNAVLGHRIADLFHPEILLYSSIDGNHVTEEKILKFFQLAMACCSPSPALRPSMKQVLRKLNEIGT | 356 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 35904775 | 35906046 | - | CrPI670011_07g020310.1 | Cre07g2031 | 504612 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre07g2031 | 356 | Coils | Coil | 34 | 54 | - | - | |
Cre07g2031 | 356 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED | 7 | 355 | IPR052451 | - | |
Cre07g2031 | 356 | SUPERFAMILY | Protein kinase-like (PK-like) | 75 | 351 | IPR011009 | - | |
Cre07g2031 | 356 | Gene3D | Transferase(Phosphotransferase) domain 1 | 151 | 356 | - | - | |
Cre07g2031 | 356 | Gene3D | Phosphorylase Kinase; domain 1 | 38 | 149 | - | - | |
Cre07g2031 | 356 | ProSiteProfiles | Protein kinase domain profile. | 72 | 356 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre07g2031 | 356 | Pfam | Protein tyrosine and serine/threonine kinase | 76 | 351 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre07g2031 | Cre-Chr7:35904775 | Cre09g0878 | Cre-Chr9:8779490 | 7.20E-59 | dispersed | |
Cre07g2031 | Cre-Chr7:35904775 | Cre09g2059 | Cre-Chr9:39651786 | 3.80E-84 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64303 | PF07714 | PK_Tyr_Ser-Thr | 9.10E-31 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre07g2031 | - | - | - | 0.0 |