Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g2040 ATGATGCCCAAATGTAAAACCTTCACAACAACGACAACCCATGCAAAATTAGACAAATACCCAGAACATGATGAATATGGGTCCTTCGCCGGATCTTCACGGCGGCGCGTGCTCGACCCACGCGCAGCGTGGGTCCAGCGGTGGAATCGCGTGGTTCTGCTGGCACGTGCAGCCTCGGTGGCGGTTGACCCGCTCTTCTTTTACGTCATTTTCCTCACCAAGGCTGGCTCGCCCTGCTTCTACCGGGATACGGCTGTTGCTGCCGTCGTCACCGCCGTACGCACGTGCGTGGACATGGTGCACGTCTGCCACGTGTGGATGCAGTTCCGTCTGGCGTTCATTTCGACGGCGTCTTTGGTGGTCGGAAGTGGAAGCCTCGTGTGGGACGCACGTGCCATTACTTCTCACTATTTGAGGTCCTTCAGAGGCTTTTGGCTCGATTTGTTCGTCATTATTCCCATCCCTCAGGTTGTGACATGGTTGATTTTGCCAAAACTAATGAGAGAAGAAGAGATAAAAGAGATGATGAAAGTGGTTTTATTGAGCTACCTATTTCAGTTCCTTCCAAAGCTTTACCACAGCATTTACTTGATGAAGAAGCTCCAAAAAGTCACTGGCTTTATCTTTGGCAGCATTTGGTGGCGCTTTAACCTCAATGTATTTGCCTATTTGATTGCCTCTCATGTTGTAGGTGGATGCTGGTATCTCCTTGCGACGCAACGACTAATCTCGTGCCTGGAACAAAAATGCGAGAAACGAAAAACGTGCAAATTGGCATTGTCTTGCTCCATATCTGGCTACAAGGGGGCTGGTAATTTTGGAGCTTTTTCCCATGGTAATAACTTGACAAAGATCAAGTCCTTATGCTTGGAGGTCGATGGACCCTTTAGCTATGGAATTTATGAGCCTGTTCTTTTGGTATTCTCTAGCAACTCTCTAGCTGTTAGAATTCTTTATCCTATCTTCTGGGGTTTATTGAACCTAAGTTCCTTTGGCAATGAACTTGATCCCACATGTGATTTGGTGGAAGTGATATTCAGTAGCTGCATCACACTTGGGGGATTGGTGCTGTTTGTTACCCTAATTGGAAATATACAGATTTTCTTGCAAACTGTCATGGCAAGTAAGGAGGATATGCAAATACGGTTTCGAGATATGGAGTGGTGGATGAAGAGGCGACGATTGCCCATTCATTTGAGAGAAAGAGTTCGCAATTTTGAATATCAAAGGTGGGTAGCCATGGGAGGGCTAGATGAGACCGAACTAATCGGAGGCTTGCCCGATGGCCTTCGTCGAGACATCAGACGTTACCTTTGTTTAGACCTTGTTAAGAAGGTACCCTTCTTCCACATGCTCAATGATCTCATACTCGATAACATTTGTGATCGTGTTAAACCGCTCCTATTTGCTAAAGGTGAAAAGATAGTAAGGGAGGGAGACCCTGTGCAAAGAATGGTGTTTATTATTGAAGGATGCGTGGAGCGTAGGCGAGGATGCTGCCTAAGCAAAGGCTTTGTAGGCACCAGTTGGCTCAATTCCGGTGGCTTTTTTGGGGAGGAGCTACTGTCGTGGTGTCTCCGATTTCAACACCCTCCATATTTCGATAAGCTTCCAACCTCATTGGCAACATTTACATGTTTACAGCCAGTCGAAGCATATGGCCTCGACGCATCCGATCTCAAATACATTACCAAACACTTCCGTTACATGTTTGCTAGTGAAAAGCTGAAGCAAACTATGCGTTATTACTCTTCATATTGGCGAACATGGGGAGCTGTGATTATTCAGTTTTCATGGCGTCGTCATCGGACACAAAACCGACCCATGACTCACAACCGACTAAGCCAGTATCATACAATTTTCTCATCATTGAAGCCAAACGATCATCTCGAGTAG 1896 46.41 MMPKCKTFTTTTTHAKLDKYPEHDEYGSFAGSSRRRVLDPRAAWVQRWNRVVLLARAASVAVDPLFFYVIFLTKAGSPCFYRDTAVAAVVTAVRTCVDMVHVCHVWMQFRLAFISTASLVVGSGSLVWDARAITSHYLRSFRGFWLDLFVIIPIPQVVTWLILPKLMREEEIKEMMKVVLLSYLFQFLPKLYHSIYLMKKLQKVTGFIFGSIWWRFNLNVFAYLIASHVVGGCWYLLATQRLISCLEQKCEKRKTCKLALSCSISGYKGAGNFGAFSHGNNLTKIKSLCLEVDGPFSYGIYEPVLLVFSSNSLAVRILYPIFWGLLNLSSFGNELDPTCDLVEVIFSSCITLGGLVLFVTLIGNIQIFLQTVMASKEDMQIRFRDMEWWMKRRRLPIHLRERVRNFEYQRWVAMGGLDETELIGGLPDGLRRDIRRYLCLDLVKKVPFFHMLNDLILDNICDRVKPLLFAKGEKIVREGDPVQRMVFIIEGCVERRRGCCLSKGFVGTSWLNSGGFFGEELLSWCLRFQHPPYFDKLPTSLATFTCLQPVEAYGLDASDLKYITKHFRYMFASEKLKQTMRYYSSYWRTWGAVIIQFSWRRHRTQNRPMTHNRLSQYHTIFSSLKPNDHLE 631
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 36021952 36025900 - CrPI670011_07g020400.1 Cre07g2040 504621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g2040 631 SUPERFAMILY Voltage-gated potassium channels 43 370 - -
Cre07g2040 631 Gene3D Helix hairpin bin 374 439 - -
Cre07g2040 631 Gene3D Jelly Rolls 446 569 IPR014710 -
Cre07g2040 631 CDD CAP_ED 448 563 IPR000595 -
Cre07g2040 631 ProSiteProfiles cAMP/cGMP binding motif profile. 448 522 IPR000595 -
Cre07g2040 631 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 30 609 - -
Cre07g2040 631 SUPERFAMILY cAMP-binding domain-like 376 568 IPR018490 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g2040 Cre-Chr7:36021952 Cre11g0950 Cre-Chr11:6809920 2.40E-214 dispersed
Cre07g2040 Cre-Chr7:36021952 Cre10g1579 Cre-Chr10:29826647 1.00E-100 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g2040 K05391 - gmx:100798823 777.704