Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g2073 ATGAATTATATTCCCAACGCGGAACCAATGGCCAATACCATCTTCCCTCTCTTCCTCTTCTTCTTCTTCTTCTTCTTCCTCCACTTTCCATCGCTTTCTCCGGCCAAACTCCGCCCCGATTTCTACACCTACTCATGCCCTCAGGCGGAATCCATCGTCCGGTCTGTGATGCAGAAAGCTCTCATCAGAGAGCCTCGGAGTGTCGCCTCCGTTATGCGCTTCCAGTTTCACGATTGCTTCGTTAATGGCTGTGATGCTTCTATGCTGCTCGATGATACGCCGACCATGCTCGGAGAGAAACTCGCTCTCTCTAACATTAATTCGCTTAGATCTTACGAAGTTGTCGATGAAGTGAAGGAGGCCTTGGAGAAGGTCTGTCCTGGAATCGTCTCTTGTGCAGATATCATAATTATGGCATCCAGAGACGCCGTTGCTCTTACTGGCGGCCCCAACTGGGCAGTGCGATTGGGGCGGCTGGACAGCTTAACAGCAAGCCAAGAGGACTCAAACCAGATCATGCCAAGTCCAAGAGCCAATGCAACCTCTCTCATTGACCTTTTCAACAAATACAACCTTTCTGTTAAAGATTTGGTTTCTCTTTCGGGTTCGCACTCGATTGGCCAAGGCCGGTGTTTCTCCATCATGTTTCGTCTGTACAACCAGTCCGGTACGGGGCGGCCGGACCCAGCCATCGAGCCAAGCTTCAGAGAAGAGCTCTTCAAGCGATGCCCTCAAGGTGGGGATGAAAATGTGACAGTGAACCTTGATTCCACACCTTATGTTTTTGACAATCAGTACTTCAAGGACTTGGTTGGTGGGAGAGGGTTGTTGAATTCTGATGAAACTCTTTACACATTTGGTGAAACTAGAAGGTATGTGAGATTGTTTAGCCAAAATCAAAGTGCATTTTTCCGGGCGTTTGTGGAGGGTATGTTGAAGATGGGTGACTTGCAGTCTGGCCGCCCAGGGGAAGTAAGAAGGAACTGTCGGGTAGTCAATGGCCAGTCAGTGATCATATAA 1020 49.02 MNYIPNAEPMANTIFPLFLFFFFFFFLHFPSLSPAKLRPDFYTYSCPQAESIVRSVMQKALIREPRSVASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLALSNINSLRSYEVVDEVKEALEKVCPGIVSCADIIIMASRDAVALTGGPNWAVRLGRLDSLTASQEDSNQIMPSPRANATSLIDLFNKYNLSVKDLVSLSGSHSIGQGRCFSIMFRLYNQSGTGRPDPAIEPSFREELFKRCPQGGDENVTVNLDSTPYVFDNQYFKDLVGGRGLLNSDETLYTFGETRRYVRLFSQNQSAFFRAFVEGMLKMGDLQSGRPGEVRRNCRVVNGQSVII 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 36282642 36284530 - CrPI670011_07g020730.1 Cre07g2073 504654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g2073 339 PRINTS Plant peroxidase signature 195 207 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre07g2073 339 PRINTS Plant peroxidase signature 46 65 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre07g2073 339 PRINTS Plant peroxidase signature 148 163 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre07g2073 339 PRINTS Plant peroxidase signature 129 139 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre07g2073 339 PRINTS Plant peroxidase signature 70 90 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre07g2073 339 PRINTS Plant peroxidase signature 269 286 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre07g2073 339 PRINTS Plant peroxidase signature 309 322 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre07g2073 339 PRINTS Plant peroxidase signature 110 123 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre07g2073 339 PRINTS Plant peroxidase signature 253 268 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre07g2073 339 ProSitePatterns Peroxidases proximal heme-ligand signature. 196 206 IPR019793 -
Cre07g2073 339 FunFam Peroxidase 174 314 - -
Cre07g2073 339 CDD secretory_peroxidase 36 332 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cre07g2073 339 ProSiteProfiles Plant heme peroxidase family profile. 36 333 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre07g2073 339 Pfam Peroxidase 53 299 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre07g2073 339 PRINTS Haem peroxidase superfamily signature 68 82 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre07g2073 339 PRINTS Haem peroxidase superfamily signature 148 160 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre07g2073 339 PRINTS Haem peroxidase superfamily signature 196 211 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre07g2073 339 PRINTS Haem peroxidase superfamily signature 130 147 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre07g2073 339 PRINTS Haem peroxidase superfamily signature 255 270 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre07g2073 339 FunFam Peroxidase 40 183 - -
Cre07g2073 339 PANTHER PEROXIDASE 72-RELATED 24 332 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre07g2073 339 Gene3D Peroxidase, domain 2 174 314 - -
Cre07g2073 339 Gene3D - 40 333 - -
Cre07g2073 339 SUPERFAMILY Heme-dependent peroxidases 37 333 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g2073 Cre-Chr7:36282642 Cre11g0563 Cre-Chr11:2663100 5.00E-70 dispersed
Cre07g2073 Cre-Chr7:36282642 Cre07g1238 Cre-Chr7:25883449 5.40E-80 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g2073 K00430 - csv:116406090 583.948