Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre08g0119 ATGAAGGAATTCGCAGTAGAAATCGAAAGCTTGGGACGATTAAGACACAAGAACTTGGTTAATCTTCAAGGATGGTGCAAGAAAGAGAACGATCTTCTCATAGTTTATGATTATATTCCAAATGGGAGTCTTCATTCTCTTCTCTATACTCCAAAACAGAGCTTGGTATCGAAATGGGAGCAAAGATTCAACATCCTTAAAGGCATTGCTGCAGGATTACTATATCTTCATGAAGATTGGGAGCAAGTAGTGATCCACCGAGACGTAAAGCCAAGCAATGTTCTGATCGATGCCGACATGAATGCCCGACTAAGCGACTTTGGATTGTCCAGGCAATACGACCATGACGAAATATCACACACGACTCGAGTCGCCAGCACAATAGGCTACATATCGCCAGAGTTGTTTCGCATGGGGAAGGCGTCGAAGAGCGCGGATGTGTTTGCATATGGAGTTCTGCTTCTGGAAGTGGCATGTGGAAGAAAGCCTCTAGGATCAAACCAATTCATATTGGTGGACTGGGTGATGGAATGGTATGAAAGAGGGGACATTCTTTATTAG 561 43.85 MKEFAVEIESLGRLRHKNLVNLQGWCKKENDLLIVYDYIPNGSLHSLLYTPKQSLVSKWEQRFNILKGIAAGLLYLHEDWEQVVIHRDVKPSNVLIDADMNARLSDFGLSRQYDHDEISHTTRVASTIGYISPELFRMGKASKSADVFAYGVLLLEVACGRKPLGSNQFILVDWVMEWYERGDILY 186
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2503605 2504165 - CrPI670011_08g001190.1 Cre08g0119 505037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre08g0119 186 Gene3D Transferase(Phosphotransferase) domain 1 40 185 - -
Cre08g0119 186 SUPERFAMILY Protein kinase-like (PK-like) 2 172 IPR011009 -
Cre08g0119 186 Gene3D Phosphorylase Kinase; domain 1 1 39 - -
Cre08g0119 186 SMART serkin_6 2 186 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre08g0119 186 ProSitePatterns Serine/Threonine protein kinases active-site signature. 84 96 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre08g0119 186 PANTHER - 1 184 IPR050528 GO:0002229(PANTHER)|GO:0004675(PANTHER)|GO:0005886(PANTHER)|GO:0042742(PANTHER)
Cre08g0119 186 Pfam Protein kinase domain 3 165 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre08g0119 186 FunFam Lectin-domain containing receptor kinase A4.3 39 186 - -
Cre08g0119 186 ProSiteProfiles Protein kinase domain profile. 1 186 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre08g0119 Cre-Chr8:2503605 Cre10g2340 Cre-Chr10:37577691 4.10E-90 dispersed
Cre08g0113 Cre-Chr8:2410279 Cre08g0119 Cre-Chr8:2503605 9.90E-75 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64309 PF00069 Pkinase 2.60E-38 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre08g0119 - - - 0.0