Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre08g0134 ATGACTATAGATCCATTATTGGAGGAAATGGATGCATTGCCTCTTGAAACTGATTCATTAGGCAGTGATCAAATAAACTTTGTTGAAACATTGGTTGAATGGAACTCTTGGAGAGATGAACTAGCTCAACAGATGTTCTATCATAAGGATGAGAAAGAGGTGGAGGCCCTTCGACGACAAGCACTTGACAAACTTCAGGAGTTGCATGATCTGAATAGTAATGATCGTGTTAAGGTAGCTGAGGCTTTGTTCAGAGATGTTTATAAGATCGATTTGTTCCTAGTTGCACCAGATTATAATTGGAGATATCAGTATTGCATGTGCCTTTTGGGGAGAGGACTCCGTTTAGTTCTATCCTTTAAACTCTCTCTCTTCGATCACACTCTTTCACGCAGCCTCCGTCTGCACCGTATTCGTCCCTCTCACCTTCAACTGGTCGTTGTTGCACCCCCAATCGCCATCGCACACCAAGTTTTTGGACGTTGTGGTCTCCCATACCGTCGCCGGCCGTTCTCCGACGCCGTCGTGTGCCTCGCCGAGACCGTCCGCCTGCTGTCTGTTTTTCCGTTTGCTGCTTCAACTTTGCAGCAATTTACTGGTGCTGTGGCGAAAATGGTTACTGCAGCGGTTGAGAATCGGGGAAGCGATATGGTAATTGAAGGTAACGAACAGAAGCCGAAGAACATTGTATCTGATGGGTTCGATGCCAATTATCTCAAAATTTACTACGGGAAGCTTTTCCCGCATGCTGATTTTTTTAAATGGATGTCTTATGGAAATGATGGCAAGCATCCGGGCAGTGACCAATCCTATTTTGGCCGAAGAGAGTTTTCATTCACCTTAGATAATGATATTTATCTACGATTCCAATCTTTCAACAGTCTGTCAGAAATGGAAAATTCGATCAAGGAAAAATGTCCATTTAAAATTGATATTGGGCCTGTATACAGCGTGGATCCTGCAAAGAGACATGCATATGCTGGCGATAATGTATTTACTCCAGTGGAGAGAGAGCTGGTTTTTGATATTGATATGACCGATTATGATGATGTTAGATATTGTTGTTCTGGAGCTGATGTTTGCTTGGATTGCTGGCCTTTAATGACAGCTGCTATCAAAGTGATTGATACTACCCTCCGAGATGACTTTGGATTTAACCACATTCTATGGGTATTTAGTGGTCGACGTGGTGTTCACTGTTGGGTTTGTGATGGCAAAGCTAGAAGGTTGTCCAATGAACAGCGAGCTGCCATTGCTGAATATTTCCATTTATATCAGGGTAATGAAAGTAGTTGCAAGAAAATTTCTCTAACTGGTCCAGTTCTTCATCCATTTCTCGCGAGATCATACATAGAAGTTCTCAAGGATAGCTTTGAATCACAATTGCTTTGTAGTCAAAAGATTTTCTCAACTGAGGAGAGATATGAGAAAATATTAGATATGATTCATGATGAATCCATTACTTCAGAGCTTCGGGGAAGGTGGCAAGATAATAGGCGACCCTCTAAAAATGATGTTAACTCAGTAAGATGGGAACAACTGAAAAATATGTTGCAATCAGGGAAACATAAGGCACAAGGAATGCGTAGGCATGTTGAAGAGATTGTTTTCTCTTTTACCTACCCCAGGCTTGACTTGGAGGTTACTAAACACATGAACCATCTGCTAAAAGCACCATTCTGTGTTCATCCCAAAACAGGTCGTATCTGTGTCCCTATTGACCCTGAACATTGTGATGAGTTTGATCCTACTACTGTGCCAACTGTTTCCCAGCTCCTAGAAGAACTTAATGCTGCAGACATGGAAGTAGATAGTGAGACTGACTGGGATAGAACCTCACTTGGGGAGTCTATTAGGTTTTTCAGATCCGCATTTTTACAGCCGTTACTGAAATCATGCAAGGAGGAGATAGAATCTTCGTACAATGCGAAAGTGCAACAGTCTAAAAATTCTCTGAGTTGGTAG 1965 42.14 MTIDPLLEEMDALPLETDSLGSDQINFVETLVEWNSWRDELAQQMFYHKDEKEVEALRRQALDKLQELHDLNSNDRVKVAEALFRDVYKIDLFLVAPDYNWRYQYCMCLLGRGLRLVLSFKLSLFDHTLSRSLRLHRIRPSHLQLVVVAPPIAIAHQVFGRCGLPYRRRPFSDAVVCLAETVRLLSVFPFAASTLQQFTGAVAKMVTAAVENRGSDMVIEGNEQKPKNIVSDGFDANYLKIYYGKLFPHADFFKWMSYGNDGKHPGSDQSYFGRREFSFTLDNDIYLRFQSFNSLSEMENSIKEKCPFKIDIGPVYSVDPAKRHAYAGDNVFTPVERELVFDIDMTDYDDVRYCCSGADVCLDCWPLMTAAIKVIDTTLRDDFGFNHILWVFSGRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNESSCKKISLTGPVLHPFLARSYIEVLKDSFESQLLCSQKIFSTEERYEKILDMIHDESITSELRGRWQDNRRPSKNDVNSVRWEQLKNMLQSGKHKAQGMRRHVEEIVFSFTYPRLDLEVTKHMNHLLKAPFCVHPKTGRICVPIDPEHCDEFDPTTVPTVSQLLEELNAADMEVDSETDWDRTSLGESIRFFRSAFLQPLLKSCKEEIESSYNAKVQQSKNSLSW 654
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2857325 2876576 - CrPI670011_08g001340.1 Cre08g0134 505052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre08g0134 654 Coils Coil 54 74 - -
Cre08g0134 654 SUPERFAMILY Prim-pol domain 236 600 - -
Cre08g0134 654 CDD AE_Prim_S 248 583 IPR014052 GO:0003896(InterPro)|GO:0006269(InterPro)
Cre08g0134 654 Pfam DNA primase small subunit 341 574 IPR002755 GO:0003896(InterPro)|GO:0006269(InterPro)
Cre08g0134 654 FunFam DNA primase 226 635 - -
Cre08g0134 654 Gene3D DNA primase, PRIM domain 227 635 - -
Cre08g0134 654 PANTHER DNA PRIMASE SMALL SUBUNIT 208 640 - GO:0003896(PANTHER)|GO:0005658(PANTHER)|GO:0006269(PANTHER)
Cre08g0134 654 NCBIfam eukaryotic-type DNA primase catalytic subunit PriS 240 593 IPR014052 GO:0003896(InterPro)|GO:0006269(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre08g0134 K02684 - csv:101203146 891.723