Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre08g0181 ATGTTTGCTGCAACGCTCGGATCCGTCTCCGCTTATTCCTTTCTCTCACAGTTCGCCTCCATTGATGCTTCTCACGCCCGTTCAACCTCGGCCTCCCTTCTACTTCACACGCCCTTCTCTAAACGACCTTTATCTCCGCCGCCGGAATCAGTTCGACCTGCTCGGGTGCATGTGAATTTGCAGCAAATAATTCAGAGAAATAGGAACTGTTTGATCAGACATAGGAACTGGGCACAACGGTTTGTTGGTCTCAACAAGAATGCATCTACAAAAGCAGCTGTGATTACTGCAATGTCCTCAGCATCCGTGTGCATTGGGCCTGCTCTGGAGGTGCAAGAAATACGGGAGAGATCCAACAAGTGGCAATGGAACCAGTATTCTATAAACTATTTTGTTTCTCATTATCAACCTTCTCAACAGCAACCACAATCAAGTTCAAGTCCTCCTGTCGTTCTTTTAGTTCATGGCTTTGGAGCTTCTATTCCTCATTGGCGCAGGAATATTAGCACATTGTCTCAATATTCAACTGTCTATGCCATCGACCTTCTTGGCTTTGGTGCTTCCGATAAGCCTGCCGGGTTTGCATATACCATGGAAACATGGGCAGATTTGATATTAGATTTTGTGGATCAAGTCATTAAGAAGCCAACTGTGCTAGTGGGTAACTCAGTGGGAAGCCTTGCTTGCGTGATTGCTGCTTCAGATTCCAGTAGAAATCTAGTTCGAGGACTTGTGCTCTTAAACTGTGCTGGTGGTATGAACAATAAAGCAATTGTCGATGATTGGAGGATCAAACTGTTATTACCATTACTTTGGCTGTTCGATTTCTTATTGAACCAACGAATAATTGCTTCCGTGCTGTTTGAGCGTGTGAAAAAGCGAGATAGCTTGAGGAACATTTTGTCGTCCGTATATGGAAACAAGGAAAGTGTGGATGAAGATCTGATAGACATTATTATGGAACCAGCAAATGACGAAGGGGCGCTTGATGCTTTCGTTTCAATCGTTACGGGGCCACCAGGGCCAAGTCCGGTGCAACTAATGCCAAAAATTTCTGTGCCTGTTCTGATTTTGTGGGGAGATGAAGATCCGTTCACGCCACTTGATGGCCCTGTTGGGAAGTACTTCAGGAAGTTAGGTATGGAAGTTCCAAATGTCAGTCTTTTTGTGTTGAAAGGAGTAGGGCATTGTCCCCATGATGATAGGCCTGAACTAGTGCATGAAAAGCTCCTTCCATGGTTGGCTCAGCTTCCTGCATTGTAA 1263 45.13 MFAATLGSVSAYSFLSQFASIDASHARSTSASLLLHTPFSKRPLSPPPESVRPARVHVNLQQIIQRNRNCLIRHRNWAQRFVGLNKNASTKAAVITAMSSASVCIGPALEVQEIRERSNKWQWNQYSINYFVSHYQPSQQQPQSSSSPPVVLLVHGFGASIPHWRRNISTLSQYSTVYAIDLLGFGASDKPAGFAYTMETWADLILDFVDQVIKKPTVLVGNSVGSLACVIAASDSSRNLVRGLVLLNCAGGMNNKAIVDDWRIKLLLPLLWLFDFLLNQRIIASVLFERVKKRDSLRNILSSVYGNKESVDEDLIDIIMEPANDEGALDAFVSIVTGPPGPSPVQLMPKISVPVLILWGDEDPFTPLDGPVGKYFRKLGMEVPNVSLFVLKGVGHCPHDDRPELVHEKLLPWLAQLPAL 420
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4089095 4093400 + CrPI670011_08g001810.1 Cre08g0181 505099

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cre08g0181 420 Gene3D alpha/beta hydrolase 110 416 IPR029058 -
Cre08g0181 420 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 89 417 - GO:0009507(PANTHER)|GO:0015994(PANTHER)|GO:0047746(PANTHER)
Cre08g0181 420 Pfam Alpha/beta hydrolase family 151 407 IPR000073 -
Cre08g0181 420 FunFam Predicted protein 107 416 - -
Cre08g0181 420 SUPERFAMILY alpha/beta-Hydrolases 117 414 IPR029058 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre08g0181 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g2730 Cre-Chr2:40437750 Cre08g0181 Cre-Chr8:4089095 1.80E-44 dispersed
Cre07g1199 Cre-Chr7:25157344 Cre08g0181 Cre-Chr8:4089095 2.70E-48 dispersed
Cre08g0181 Cre-Chr8:4089095 Cre09g2006 Cre-Chr9:39131474 1.30E-27 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1795 . Blo12g00803 . Bda03g00369 . Bpe04g00332 Bma04g00347 . . . Cma01g00893 . Car01g00814 . . . . . . . . . . . Cla08g00207 . . . . . Cre08g0181 . . . . . . . . . . . . . . . . . Cmo01g00937 . . . . . . Cpe02g00973 . . . . . . . . . . . . . . Lsi08g00193 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005437 1 4 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4 4 1 40