Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre08g0299 ATGGTACCTTCGGGACCATCTACTCCCATTGGTGGTGCACAGTCTGTTTCACCGTCGCTTTTGAGATCAAATTCTGGAATGATGGGAGCACAAGGGGGGCTGCCTTCTCAGTCAGCTTTTCCTTCTCTTGTATCCCCACGGACACAGTTTAGCAGTATGAATATGCTTGGTAATACACCCAGTATGTCTTCTCTCCTAAATCAGTCATTTGGTAATGGAGTTCCGAATTCTGGGCCCTCAGGCCTTGGAAACAGCCAACGAGGAGTTATGGACCCTGGTTCTGAGTCAGATCCATTTTCACTTGTTGGCAATGGTGTGAACTTCAACAATACCCCATCGTCATTGGTGACATCAAATACAGCAAACCCTGGTTCATCTAGTCAAGTTTCAGGGCAGCAATTTTCAAATCATTCTAGCAGCCAAATAATACCCAATCAACAGCAACCACAGCAAATGGAACTCCAGAACTTTCAACATGGTCAGCATTCAATGCAACAGTTCGCTACGTCTAATAACATACAGCAGGCACAGCAGCAGCAACAACAACAATTCCAACGAGGAAGCTTGTGCGGTGTTGGACCCGTCAAGTTAGAGCCTCAAATGAATAATAACGATCTTCAAGCACAGCAACTACAGCAGCAGCAGCAGTTGCAGTCAATGAGGAATCTTGGTCCTGTGAAACTGGAACCACAACAACTTCAATCAATGAGAAACATGGGTCCTGTGAAATTGGAACCTCAACAGTCTGATCAGTCATTGTTTCTACAGCAGCAACATCAACATCAACAGCAACAGCAACAGCAACAGCAACAACAGCAGCTACTCAGTATGTCTAGGCAGTCCTCTCAGGCTGCTGCTGCACACATTAATCTTTTGCAACAACAAAGACTCTTGCAATTGCAACACCAACAGCAACTCCTGAAGGCTATACCTCAGCAAAGGCCGCATTTGCCTCAACAATTTCAACAACAAAATTTGCCATTGAGATCCCCTGTAAAATCAGTTTATGAACCTGGCATGTGTGCTCGACGTTTAACAAGTTATATGTGCCAACAACAGCAAAGGCCTGAAGACAACAATATTGAGTTCTGGAGGAAATTTGTTGCAGATTACTTTGCTCCCCATGCCAAAAAGAAATGGTGCGTTTCCATGTATGGAAATGGTCGCCAAACAACTGGTGTATTTCCACAGGATGTTTGGCATTGTGAAATCTGCAACCGCAAGCCTGGTCGAGGTTTTGAAGCGACTTTTGAAGTTCTCCCAAGGCTGTTCAAAATCAAGTATGAGAGTGGAACGCTCGAAGAGCTTCTTTATGTTGATATGCCCCGCGAATATCATAATTCATCTGGACAAATTGTCCTTGATTACGCAAAAGCAATACAAGAAAGCGTATTTGAGCAACTTCGTGTTGTTCGCGATGGGCAACTTCGAATAGTTTTTTCTCCAGACTTAAAGATATGTTCTTGGGAATTTTGTGCTCGACGTCATGAAGAGCTTATTCCTCGAAGGTTGCTAATACCTCAGGTTAGTCAGCTGGGTGCAGCTGCTCAGAAGTATCAGACTGCAATTCAAAATGCATCATCTAACTTGCCTACTCCAGAGTTACAAAATAATTGCAACATGTTTGTGGGCTCAGCTAGACAATTGGCCAAGGCATTGGAAGTGCCATTAGTAAATGACTTGGGATATACGAAGAGATACGTTCGGTGCCTTCAGATATCAGAAGTCGTCAATAGTATGAAGGACTTGATAGATTACAGCCAAGAAACTTCGACTGGGCCAATTGAGAGTTTGGCAAAGTTTCCGCGGAAGACGAATGCTTCACCAGGCTTCCACAACCAAGCTCAAAATATGGAGCAACAATTACCTCAGCCGCAGCAAACAATTGATCAAAACACAAATGGCGACCAAAGCTCTGCTCAGGCTGCTTCGATGCAGCTTGCTGCTAACAATGGTGTTCCAAGTGCAAATAACTCTGGTAATCCAGCGTCAACCTCATCCCCTGCCAGTACCATTGTTGGGTTACTCCACCAGAACTCCATGAACTCCAGACAGCAGAACTCTATCAACAGCGCTGGCAGCCCTTATGCCGGAAATTCTGCACAAATATCGTCTCCAGGTTCCTCCACCACGATTGCTCAGGCACAAGCTAACTCCTCGTTCCAATCGCCTACATTGTCCTCACCTAACAATCACCCACAATCATCAATTGGCACTGCAACAACTACTAATCACATGAGTGCCACTAATTCTCCGGCAAATGTTCCCTTGCAACAGCCAACACAATCCTCAGATGCTGATCAAAACGATTCCCAAAGTTCCGTACAAAAGATTATTCAGGAATACATGATGTCGAATCATCTAAACGGGATGAACACAATGACTGGTGTATCCTCTATAGGGGATGAGGCGAAAACTGTTAACGGGATGTTGCCAGGAAACAACATTATGAGTCTCAATGGACGGAATGGACTCGTCGGGACTGGAACTGCTAATGGCGTTCCTGGGATCAGGAATGCGGGATATGGCTCAATGAGTGGGGGACTTGCTCAGGCTTCTATGGTCAATGGAATGAAGTCAGCAATGGGAAATAACTCTATTTCGAATGGGAGAATCGGGATGGCATCATTGGCTCGAGGACAGAGCATAAATCATCAAGATTTGGGGGACCAGCTTCTTAATGGACTTGGAGCTGTGAATGGATTTAATAATCTTCAATTCGAATATTGA 2730 44.73 MVPSGPSTPIGGAQSVSPSLLRSNSGMMGAQGGLPSQSAFPSLVSPRTQFSSMNMLGNTPSMSSLLNQSFGNGVPNSGPSGLGNSQRGVMDPGSESDPFSLVGNGVNFNNTPSSLVTSNTANPGSSSQVSGQQFSNHSSSQIIPNQQQPQQMELQNFQHGQHSMQQFATSNNIQQAQQQQQQQFQRGSLCGVGPVKLEPQMNNNDLQAQQLQQQQQLQSMRNLGPVKLEPQQLQSMRNMGPVKLEPQQSDQSLFLQQQHQHQQQQQQQQQQQQLLSMSRQSSQAAAAHINLLQQQRLLQLQHQQQLLKAIPQQRPHLPQQFQQQNLPLRSPVKSVYEPGMCARRLTSYMCQQQQRPEDNNIEFWRKFVADYFAPHAKKKWCVSMYGNGRQTTGVFPQDVWHCEICNRKPGRGFEATFEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQTAIQNASSNLPTPELQNNCNMFVGSARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSQETSTGPIESLAKFPRKTNASPGFHNQAQNMEQQLPQPQQTIDQNTNGDQSSAQAASMQLAANNGVPSANNSGNPASTSSPASTIVGLLHQNSMNSRQQNSINSAGSPYAGNSAQISSPGSSTTIAQAQANSSFQSPTLSSPNNHPQSSIGTATTTNHMSATNSPANVPLQQPTQSSDADQNDSQSSVQKIIQEYMMSNHLNGMNTMTGVSSIGDEAKTVNGMLPGNNIMSLNGRNGLVGTGTANGVPGIRNAGYGSMSGGLAQASMVNGMKSAMGNNSISNGRIGMASLARGQSINHQDLGDQLLNGLGAVNGFNNLQFEY 909
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8940974 8951557 + CrPI670011_08g002990.1 Cre08g0299 505217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre08g0299 909 MobiDBLite consensus disorder prediction 1 180 - -
Cre08g0299 909 Coils Coil 203 223 - -
Cre08g0299 909 PANTHER LIM DOMAIN-BINDING PROTEIN 231 905 IPR029005 GO:0000122(PANTHER)|GO:0005634(PANTHER)|GO:0005667(PANTHER)|GO:0045944(PANTHER)
Cre08g0299 909 MobiDBLite consensus disorder prediction 650 669 - -
Cre08g0299 909 MobiDBLite consensus disorder prediction 100 180 - -
Cre08g0299 909 Pfam LIM-domain binding protein 344 598 IPR029005 -
Cre08g0299 909 MobiDBLite consensus disorder prediction 243 275 - -
Cre08g0299 909 MobiDBLite consensus disorder prediction 8 91 - -
Cre08g0299 909 MobiDBLite consensus disorder prediction 681 774 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre08g0299 Cre-Chr8:8940974 Cre08g0594 Cre-Chr8:18871533 4.50E-275 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre08g0299 - - - 0.0