Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre08g0332 | ATGGATGTCGACTCCGGCGAGGCAGTGGTGACAGAGGCGGGGGAAGCTCATGAAGTTGGCAACGGCGACAGCCGTGGCGGTGGCGGCGGAAACGGATCGAATTCCGGCGAAGAAGATAAAGGGTCATCTTTGTTGTTGTTTGAAGATGGTGAGAAGAATTTTGGTGGGAACAGGTGGCCAAGACAAGAGACTTTGGCTTTGTTGAAGATAAGATCTGATATGGATGCAATTTTTAGAGATGCAACTCATAAAGCTCCATTGTGGGATGAAGTTTCAAGGAAATTAGGAGAGCTTGGATTCAATCGAACTCCAAAGAAATGCAAGGAGAAATTTGAGAATGTTTATAAGTATCACAAGAGAACCAAAGATGTTCGAAGTGGGAAATCCGATAATAGCAAAAAAGTTTATAGATTTTCAGATGAATTGGAGGCTTTTGATCACCATAATAGCCATCACCAAAATCACATTTTATTCCAATCTCACCACCACCAGCCGCCGCAGCCGCCACCACTGCCGCCAGTTCCTCCTCCGACGACAACAACACCGCCTCCAGTGATGAAAACAGTCAACTCTACTGTTTCATCCACCATGAACACTACAACAAACAACAACTCTTTGCCACCAAAGTCTTCTAATAACCCTCTTTCCAATTTGCCAAACATGGCTGCCAATGTGATGTTTTCGAGCTCCACTTCATCGTCGACGGCGTCGGAGGAAGATCCATTTCGGAGTAGCAGGAGGAGGAGGAAGAAGAGGAAGTGGAGTGATTTCTTCTTGAGATTAACAAAGGAGGTAATAGAGAAGCAAGAAGGGCTTCAATTAAAGTTCCTAGAAGCCTTGGAGAGAATAGAGAATCAAAGGAAATTGAGAGATGAAGCATGGAGAATGAAAGAAATGAAAAGGGTTAATCAAGAACATGAAGTTTTAGTTCAAGAGATGTCCATGGCCGCTGCGAAAGATGCAGCCGTCGTTGCATTTTTGCAAAAGATAGCTCCATCTTCGGCTCCGCCACCGCCACCGCCACCACCACCAATGACAACTCAGTCGCAAAACAACGAGAATAACGGAAAGATGACGTCCGTAATCCCGACGACGACAAATGGAAAGGTGAGCAGCATTGGAGGAAGCCCTTCAAGATGGCCAAAAGGTGAAGTTGAAGCATTGATAAGACTAAGGACAGAAATGGAAATGAAATATCAAGAGAATGGGCCAAAAGGGTTATTATGGGAGGAGATTTCAGCAGCAATGAGAGGGCTTGGATACAATAGAAGCTCAAAGAGATGCAAAGAGAAATGGGAAAACATAAACAAATACTTCAAAAAGGTGAAAGATAGCAACAAGAAGAGAGCAGAAGATTCCAAGACATGTCCTTACTTTCATCAATTAGATGCTCTTTATAGAGAGAAAGAAAAAAATATGAATAATTTTGATATCAATAGCCAAATGGAGCCATTGATGGTTGAACCAGAACAACAATGGCCACCTCCATTTCAAGCCAATAATCAAATCATGGGAAGTTTACAAAGAATAAATGATGAAGGAAATCAAGAAGAAGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGGAGGAAGTAGTAGCACAGATGTGGAAGATTGA | 1638 | 42.61 | MDVDSGEAVVTEAGEAHEVGNGDSRGGGGGNGSNSGEEDKGSSLLLFEDGEKNFGGNRWPRQETLALLKIRSDMDAIFRDATHKAPLWDEVSRKLGELGFNRTPKKCKEKFENVYKYHKRTKDVRSGKSDNSKKVYRFSDELEAFDHHNSHHQNHILFQSHHHQPPQPPPLPPVPPPTTTTPPPVMKTVNSTVSSTMNTTTNNNSLPPKSSNNPLSNLPNMAANVMFSSSTSSSTASEEDPFRSSRRRRKKRKWSDFFLRLTKEVIEKQEGLQLKFLEALERIENQRKLRDEAWRMKEMKRVNQEHEVLVQEMSMAAAKDAAVVAFLQKIAPSSAPPPPPPPPPMTTQSQNNENNGKMTSVIPTTTNGKVSSIGGSPSRWPKGEVEALIRLRTEMEMKYQENGPKGLLWEEISAAMRGLGYNRSSKRCKEKWENINKYFKKVKDSNKKRAEDSKTCPYFHQLDALYREKEKNMNNFDINSQMEPLMVEPEQQWPPPFQANNQIMGSLQRINDEGNQEEDEEEEEEEEEEEEEEEDGGSSSTDVED | 545 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 10629697 | 10631920 | - | CrPI670011_08g003320.1 | Cre08g0332 | 505250 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre08g0332 | 545 | Coils | Coil | 507 | 536 | - | - | |
Cre08g0332 | 545 | MobiDBLite | consensus disorder prediction | 491 | 545 | - | - | |
Cre08g0332 | 545 | ProSiteProfiles | Myb-like domain profile. | 51 | 115 | IPR001005 | - | |
Cre08g0332 | 545 | Pfam | Myb/SANT-like DNA-binding domain | 378 | 465 | IPR044822 | - | |
Cre08g0332 | 545 | Pfam | Myb/SANT-like DNA-binding domain | 57 | 137 | IPR044822 | - | |
Cre08g0332 | 545 | MobiDBLite | consensus disorder prediction | 514 | 545 | - | - | |
Cre08g0332 | 545 | SMART | sant | 55 | 117 | IPR001005 | - | |
Cre08g0332 | 545 | SMART | sant | 376 | 438 | IPR001005 | - | |
Cre08g0332 | 545 | CDD | GT1 | 378 | 443 | - | - | |
Cre08g0332 | 545 | MobiDBLite | consensus disorder prediction | 163 | 183 | - | - | |
Cre08g0332 | 545 | FunFam | Trihelix transcription factor GT-2 | 59 | 120 | - | - | |
Cre08g0332 | 545 | MobiDBLite | consensus disorder prediction | 158 | 251 | - | - | |
Cre08g0332 | 545 | FunFam | Trihelix transcription factor GT-2 | 380 | 441 | - | - | |
Cre08g0332 | 545 | MobiDBLite | consensus disorder prediction | 348 | 374 | - | - | |
Cre08g0332 | 545 | MobiDBLite | consensus disorder prediction | 184 | 239 | - | - | |
Cre08g0332 | 545 | ProSiteProfiles | Myb-like domain profile. | 378 | 436 | IPR001005 | - | |
Cre08g0332 | 545 | PANTHER | FI21293P1 | 30 | 524 | - | - | |
Cre08g0332 | 545 | Gene3D | - | 59 | 120 | - | - | |
Cre08g0332 | 545 | Gene3D | - | 380 | 441 | - | - | |
Cre08g0332 | 545 | MobiDBLite | consensus disorder prediction | 1 | 45 | - | - | |
Cre08g0332 | 545 | MobiDBLite | consensus disorder prediction | 494 | 511 | - | - | |
Cre08g0332 | 545 | CDD | GT1 | 57 | 122 | - | - | |
Cre08g0332 | 545 | MobiDBLite | consensus disorder prediction | 332 | 379 | - | - | |
Cre08g0332 | 545 | MobiDBLite | consensus disorder prediction | 332 | 347 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre08g0332 | Cre-Chr8:10629697 | Cre09g2389 | Cre-Chr9:43285516 | 1.10E-74 | dispersed | |
Cre08g0330 | Cre-Chr8:10442483 | Cre08g0332 | Cre-Chr8:10629697 | 2.00E-96 | proximal |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
54135 | PF13837 | Myb_DNA-bind_4 | 4.10E-22 | CL0123 | Cre | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre08g0332 | - | - | - | 0.0 |