Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre08g0505 ATGGACCCATTCCCGAGCAGGGTCTTCAAGCCCCACGCTCTATTCTGGAGAGGGCCTAGAAAAGCAAGCATTGGCGATCCGTCTCTCCTTATCACGCCAGCCGGAGAAAAGCATCTACAACATCTGGCGGTGCCCTCATGGGCACACCCAATTCTACCACTTCACGGCGGTGGTAATCGCCGGAATGGGCTTCTTCACCGATTCCTACGACCTCTTCTGCATCTCTCTCGTCACAAAACTCCTCGGCCGCATTTACTACACCGTCGAGGGCTCCCCCCGTCCCGGAACCCTCCCCCCGCCGTCGCCGCCGCCGTAAACGGCGTCGCCCTCGCCGGCACTCTCGCCGGTCAACTCTTCTTCGGCTGGCTCGGCGACAAGCTCGGCCGGAAGCGCGTCTATGGCCTCACCCTCATCCTCATGGTCGTCTGTTCCATCGCCTCCGGTCTCTCCTTCAGCAGCTCTCCGACCGCCGTCATCACCACTCTCTGTTTCTTCCGATTCTGGCTTGGCTTCGGAATCGGCGGCGACTACCCTTTATCCGCTACCATCATGGCCGAATACTCCAACAAAAAAACCCGAGGCGCCTTCATAGCCGCCGTCTTCGCAATGCAGGGATTTGGAATTCTGGCCGGCGGCACGGTAGCAATTGTAATCTCGTCAATTTTCAAGACCCTTTTTAAAGCTCCACCGTACGCGGTGGACGCCATGAAGTCGACGGTTCCAGAAGCGGATTACGTATGGAGAATTATACTAATGTTGGGTTCTTTGCCTGCGCTTTTAACTTACTATTGGCGGATGAAAATGCCCGAAACGCCGCGTTACACTGCCTTGGTTGCGAACGACAATAAGAAAGCTTGTGACGACATGTCGAAAGTGTTGAATTTGGAAATTGCCCAAAACAATGAGTGCTTTAGAAGAGGTTTTCAAAATCGCCAAGGCTCAGACACTTATTGCCCTTTGTGGGACCGTTCCGGGCTATTGGGCCACGGTTCTTCTAATAGACCGGGTTGGTCGGTTTTTTATTCAGGTGGTTGGGTTTTTCTTCATGACGGTTTTTATGTTTGCGCTGCTGTTCCCTACCATCATTGGACCGGGAATCATGTGGGGTTTGTTGTTATGTATGGCCTTACCTTTTTCTTTGCTAATTTTGGTCCTAATAGTACTACCTTTGTTGTCCCTGCTGAGATTTTTCCGGCCCGGTTCCGGTCCACTTGTCATGGGATATCGGCTGCAGCTGGGAAAGCCGGGGCTATCCTTGGAGCTTTTGGGTTCTTGTATGCGGCTCAGAGTCAGGACCCGACAAAGACCGATGCCGGTTACCCGCCCGGGATTGGAATGAGGAATTCTTTGTTCATTTTGGGAGTTGTTAATGTGTTTGGATTGCTTTTTACTTTTTTGGTTCCGGAATCTAAAGGGAAGTCTTTGGAAGAAATGTCGAAGGAGAATCAAGTTGAAGAAGAAGAACATGAAGAAAGTAAAGAGCAAGTTAATGGAGTTGAACAGCCCTCACCTCACACCGAAGCCCTTAACGTCAAAACCCTCAACGCCGAAGCCCTCACGTCATTGTGTTCAGCCGCTTCAACCACCGTCACAGTCCCTGTTGTTTCTGTCGCTTCCGTCAATCATGTCGCTTTCATCCATCGCTGTCGTTGCTTCCGCCGTTGTTTTCAGCCGAAGGAAGCAAGATGA 1689 51.81 MDPFPSRVFKPHALFWRGPRKASIGDPSLLITPAGEKHLQHLAVPSWAHPILPLHGGGNRRNGLLHRFLRPLLHLSRHKTPRPHLLHRRGLPPSRNPPPAVAAAVNGVALAGTLAGQLFFGWLGDKLGRKRVYGLTLILMVVCSIASGLSFSSSPTAVITTLCFFRFWLGFGIGGDYPLSATIMAEYSNKKTRGAFIAAVFAMQGFGILAGGTVAIVISSIFKTLFKAPPYAVDAMKSTVPEADYVWRIILMLGSLPALLTYYWRMKMPETPRYTALVANDNKKACDDMSKVLNLEIAQNNECFRRGFQNRQGSDTYCPLWDRSGLLGHGSSNRPGWSVFYSGGWVFLHDGFYVCAAVPYHHWTGNHVGFVVMYGLTFFFANFGPNSTTFVVPAEIFPARFRSTCHGISAAAGKAGAILGAFGFLYAAQSQDPTKTDAGYPPGIGMRNSLFILGVVNVFGLLFTFLVPESKGKSLEEMSKENQVEEEEHEESKEQVNGVEQPSPHTEALNVKTLNAEALTSLCSAASTTVTVPVVSVASVNHVAFIHRCRCFRRCFQPKEAR 562
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 17473711 17481359 - CrPI670011_08g005050.1 Cre08g0505 505423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre08g0505 562 Pfam Sugar (and other) transporter 104 286 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cre08g0505 562 Pfam Sugar (and other) transporter 354 480 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cre08g0505 562 Gene3D MFS general substrate transporter like domains 84 291 IPR036259 -
Cre08g0505 562 Gene3D MFS general substrate transporter like domains 341 496 IPR036259 -
Cre08g0505 562 MobiDBLite consensus disorder prediction 476 496 - -
Cre08g0505 562 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 351 477 - -
Cre08g0505 562 Coils Coil 475 495 - -
Cre08g0505 562 SUPERFAMILY MFS general substrate transporter 96 481 IPR036259 -
Cre08g0505 562 CDD MFS_PhT 112 471 - -
Cre08g0505 562 ProSiteProfiles Major facilitator superfamily (MFS) profile. 51 562 IPR020846 GO:0022857(InterPro)
Cre08g0505 562 MobiDBLite consensus disorder prediction 476 505 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g0482 Cre-Chr7:2643673 Cre08g0505 Cre-Chr8:17473711 2.70E-142 dispersed
Cre08g0505 Cre-Chr8:17473711 Cre11g2291 Cre-Chr11:34569255 2.90E-86 dispersed
Cre08g0505 Cre-Chr8:17473711 Cre07g0464 Cre-Chr7:2409442 1.80E-136 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre08g0505 K08176 - csv:101205342 524.242