Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre08g0513 ATGAAGTTTCTCACATTGCTCTCCCTTTTATTATCACTTCTCACTAAGCTAAAGATCAAGATGGGTGAGAATTCTATTGTGAGTAAGTTGAAGCCTTATATTCTAGTGGTGAGCCTACAATTTGGAATTGCAGGCATATATGTAATATGCATGGCCACTCTCACCAAAGGCATGAGTCGTTATGTTTTGATCGTGTATCGAAACACTGTTGCTGCTCTCTTTCTCGCTCCGTTCGCGCTAATCTTCGAAAGGAAAACAAGACCAAAGATGACACTCCCTGTCGCTTTACAAATCATGGTCTTAGGTTTTCTAGAACCAGTTGTGGATCAAGGGTTTGGTTATCTAGGAATGATGTACACGTCAGCATCATTTGCATCGGCCATCATGAACGCTGTGCCTTCTGTTACCTTTATCATTGCAGTCATTTTTCGGGTGGAGCATCTAAATATAAAACAAGTACGAGGGGTAGCCAAAGTAATTGGCACTTTAGTGACCTTTGCTGGAGCTTTGGTTATGACACTTTACAAAGGCCCAATTCTTGAATTCTTTTGGACACAAAAAACCAACCACCATGTTAACAGCGGCGCCGCCGCAGCCAATCAGCACTGGGTGGCCGGAACTTTGTTCATCCTTCTGGGCTGCGTGTCTTGGTCTTGTTTCTACATATTACAATCTATAACAGTGAAGAGATACCCAGCGGAGCTGTCTCTGTCGGCATTGATATGCTTGGCCGGTGCACTTCAAAGCACAGTGATAGCAGTAGCTATAGAGCATCGTCCTAGCGCATGGGCTGTGGGTTGGGACTCTAGGCTTCTAGCTCCTCTCTATACGGGAATAGTTGGATCAGGAATTGCATATTACTTTCAAGCTATAGTTATGAAGACAAGAGGTCCTGTATTTGTGACGGCTTTCAACCCTTTATGTATGATTGTCGTCACTATTATCTCCTCTATTGTTCTCGCCGAGAAGATTCGTCTTGGAAGCGTGATTGGAGCCATTATCATCGCACTTGGGCTTTATTCAGTCGTTTGGGGAAAAAGCAAGGATTATTCCACTGCCGGCAACACTCAAAAGCCTAACGCCGCCGTGTCGGAGCTTCCAATTACTGCCTCTCAACTCCCAACCGAACAAGATGTTCATCTTCAACCTCCAAAATGA 1158 44.39 MKFLTLLSLLLSLLTKLKIKMGENSIVSKLKPYILVVSLQFGIAGIYVICMATLTKGMSRYVLIVYRNTVAALFLAPFALIFERKTRPKMTLPVALQIMVLGFLEPVVDQGFGYLGMMYTSASFASAIMNAVPSVTFIIAVIFRVEHLNIKQVRGVAKVIGTLVTFAGALVMTLYKGPILEFFWTQKTNHHVNSGAAAANQHWVAGTLFILLGCVSWSCFYILQSITVKRYPAELSLSALICLAGALQSTVIAVAIEHRPSAWAVGWDSRLLAPLYTGIVGSGIAYYFQAIVMKTRGPVFVTAFNPLCMIVVTIISSIVLAEKIRLGSVIGAIIIALGLYSVVWGKSKDYSTAGNTQKPNAAVSELPITASQLPTEQDVHLQPPK 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 17683883 17691113 + CrPI670011_08g005130.1 Cre08g0513 505431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre08g0513 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 66 175 - -
Cre08g0513 385 PANTHER WAT1-RELATED PROTEIN 34 355 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cre08g0513 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 263 347 - -
Cre08g0513 385 Pfam EamA-like transporter family 206 343 IPR000620 GO:0016020(InterPro)
Cre08g0513 385 Pfam EamA-like transporter family 42 161 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre08g0513 Cre-Chr8:17683883 Cre10g1762 Cre-Chr10:32014096 8.20E-93 dispersed
Cre11g1981 Cre-Chr11:31568705 Cre08g0513 Cre-Chr8:17683883 2.80E-106 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre08g0513 - - - 0.0