Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre08g0590 ATGGTTGTTGATCTCTATTTTGTTAGACATTATTCTGAGGCGGAGATTCCACCGCCGTCGTTCCCCGCCGCCACCATCTCAGCTGTGCCCCTGCTCCAAGCCTCCAAGGTTCAACTCCTGCAATTCCACGGACGATTCTTCTTTCCTTTTCCCTCTGCCTTTGCTCCCCCTCTTGGGGATGTCGATCAAGAGACCACTCTACGACCGCCTCAACCATCCTCTCCTCCGCCGCCGCTAGTTTCAGAAATTATAATGTCCTCGAGAGATTCTAACGTCCTTTTCAGTGGTGGCGGTATCAGTTTTCTCAATGAAAATCACACTGGAAAGTTCAGCTATGGATATTCTAGTTTCAAGGGCAAAAGGGCTTCGATGGAGGACTTCTATGAAACAAGAATTTCTGAAGTTGATGGGCAGATGGTTGCTTTTTTCGGTGTTTTTGATGGTCATGGAGGTTCCAGAACAGCTGAATACCTTAAGCGCAATCTTTTCAAGAACCTAAGTAGCCATCCAGACTTTATCAAAGACACAAGGACTGCTATTATTGAGGTCTTTAAGCAGACCGATGCCGATTATATCAATGAAGAGAAAGGACAGCAGAAAGATGCTGGGTCAACTGCATCAACTGCTGTATTGTTGGGGGATCGTCTCCTTGTTGCAAATGTTGGGGATTCTAGAGTAGTTGCATCGAGGGCTGGTTCAGCTATTCCCCTCTCTATTGATCACAAACCTGATAGATCAGACGAGCGCGAAAGGATTGAACAAGCTGGAGGGTTCATTCTTTGGGCAGGAACTTGGAGGGTTGGTGGTATTCTAGCAGTTTCGCGTGCCTTTGGAGATAAGCTACTCAAACCATTTGTTGTTGCTGATCCTGAAATTAAGGAAGAAGAACTTGAAGGTGTAGATTTTATTATTATTGCAAGCGATGGACTTTGGAATGTCATCTCAAACGAGGAAGCTGTAGCATTGGTACAACACAACCAAGATGCAGAAATGGCATCAAGAAACCTAATCCAAGAAGCTTTTGCTCGAGGGAGTTCCGACAACATTACATGCGTCATTGTCTCCACGAAAATGGTGAACGATACTGAGTATTACGACATTCTCGGTGTTCGTTCTTCTGCTTCTGAGGAGGAGATTCGTAAGGCCTATTATCTTAAGGCGTTAGGTGAAGCTTATCAAGTGTTGAGTGATGCAGTCCAAAGAGATGCATATGATAGGAATGGGAAACATAGTATTACTAGGGAATCCATGCTTGACCCTACTGCTGTTTTTGCACTTCTATTTGGGAGTGAATTATTTGAGGACTACATTGGACATTTAGCTGTAGCATCAATGGCCTCATCTGAATTAGAGAGCGAAATTGGCAATCCAGAGAGATTACATGATAAGTTGAAGGCAATCCAGAAAGAAAGAGAAGAAAAACTTGCACGTGTACTCGAGGGTTTTCTTAATCAATATGTTCTAGGTGACAAAGACGGATTCTTACGACATGCTGAATCTGAAGCCAAAAGACTTTCTAATGCGGCTTTTGGCGTTAATATATTACACACTATAGGCTACATTTATTCAAGACAAGCAGCACAAGAGCTTGGAAAGAGAGCCATTTATCTTGGTGTGCCATTTGTGGCTGAATGGTTTCGCAACAAGGGACATTTTTGGAAGTCACAGATAACAGCTGCAAAAGGTGCTTTTCAGTTGTTACAACTTCAAGATGATATTTGCCGGCAGTTTAAAATGGATGGTAGTGGTCCTGGAAATGATATTGAATCGCATATTCAAGCGAATAAAGACACATTCCTCAATTCTTTGTGGAAGCTTAATGTGGTTGACATAGAACTGACACTTATAAATGTGTGCCAGATGGTGCTACGCGATAATACTGTTAGAAAGGAAGAACTAAAAGCTCGTGCCCTGGCTCTGAAGATTCTTGGAAAGATATTCCAGGAGAAGCAGGCACAAAATGGTGGAACGTCAAGAAAGAAAGGTGCTGCTGCAATAGATGACGACGGAACGAGTTCAGAGAGCAGCGATGATGAGGACGATCCCCGAAGGCCGCTATCATATCGAACTCCTTTTCTTACTCAGGCAAGTAGATCAAACTCTTCTCTTTCCACTCAAAAGAGGATCCACTTTATCTCATGTACGTTGAAACTCGCGCGGAAAACTTTGCCCGGTAGACTCTTCAGATGCCTCTGTAACCCAGCATTTGATGTGGACGATGATGAAATTGTGTATAAGAGCAAATGA 2247 43.44 MVVDLYFVRHYSEAEIPPPSFPAATISAVPLLQASKVQLLQFHGRFFFPFPSAFAPPLGDVDQETTLRPPQPSSPPPPLVSEIIMSSRDSNVLFSGGGISFLNENHTGKFSYGYSSFKGKRASMEDFYETRISEVDGQMVAFFGVFDGHGGSRTAEYLKRNLFKNLSSHPDFIKDTRTAIIEVFKQTDADYINEEKGQQKDAGSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERERIEQAGGFILWAGTWRVGGILAVSRAFGDKLLKPFVVADPEIKEEELEGVDFIIIASDGLWNVISNEEAVALVQHNQDAEMASRNLIQEAFARGSSDNITCVIVSTKMVNDTEYYDILGVRSSASEEEIRKAYYLKALGEAYQVLSDAVQRDAYDRNGKHSITRESMLDPTAVFALLFGSELFEDYIGHLAVASMASSELESEIGNPERLHDKLKAIQKEREEKLARVLEGFLNQYVLGDKDGFLRHAESEAKRLSNAAFGVNILHTIGYIYSRQAAQELGKRAIYLGVPFVAEWFRNKGHFWKSQITAAKGAFQLLQLQDDICRQFKMDGSGPGNDIESHIQANKDTFLNSLWKLNVVDIELTLINVCQMVLRDNTVRKEELKARALALKILGKIFQEKQAQNGGTSRKKGAAAIDDDGTSSESSDDEDDPRRPLSYRTPFLTQASRSNSSLSTQKRIHFISCTLKLARKTLPGRLFRCLCNPAFDVDDDEIVYKSK 748
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 18810273 18824203 - CrPI670011_08g005900.1 Cre08g0590 505508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre08g0590 748 SMART dnaj_3 362 400 IPR001623 -
Cre08g0590 748 Pfam Protein phosphatase 2C 112 349 IPR001932 -
Cre08g0590 748 CDD DnaJ 363 397 IPR001623 -
Cre08g0590 748 SMART PP2C_4 101 354 IPR001932 -
Cre08g0590 748 CDD PP2Cc 110 354 IPR001932 -
Cre08g0590 748 Gene3D - 102 358 IPR036457 -
Cre08g0590 748 ProSitePatterns PPM-type phosphatase domain signature. 142 150 IPR000222 GO:0043169(InterPro)
Cre08g0590 748 ProSiteProfiles PPM-type phosphatase domain profile. 111 356 IPR001932 -
Cre08g0590 748 ProSiteProfiles dnaJ domain profile. 363 408 IPR001623 -
Cre08g0590 748 SUPERFAMILY PP2C-like 108 354 IPR036457 -
Cre08g0590 748 SUPERFAMILY Chaperone J-domain 357 438 IPR036869 -
Cre08g0590 748 Gene3D DnaJ domain 359 389 IPR036869 -
Cre08g0590 748 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 327 681 IPR052423 -
Cre08g0590 748 MobiDBLite consensus disorder prediction 654 691 - -
Cre08g0590 748 Pfam X-domain of DnaJ-containing 468 655 IPR026894 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g1091 Cre-Chr5:10240663 Cre08g0590 Cre-Chr8:18810273 5.90E-28 dispersed
Cre05g1771 Cre-Chr5:29588318 Cre08g0590 Cre-Chr8:18810273 2.10E-95 dispersed
Cre08g0590 Cre-Chr8:18810273 Cre11g0904 Cre-Chr11:6238599 3.70E-81 dispersed
Cre08g0590 Cre-Chr8:18810273 Cre07g0608 Cre-Chr7:3891444 1.70E-46 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre08g0590 - - - 0.0