Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre08g0594 | ATGGTAACATCGGGGCCACCCACTCCTATGGGTGGTGGTGCGCAGTCTGTTTCACCCTCACTTCTGCGATCTAATTCTGGATTGCTGGGAGTTCAAGGTGGTCTGCTTCCTTCTCAGGCAGCCTTTTCTTCACTTGTATCGCCCCGGAATCAGTTCAATAATATGAATATGCTTGGTAATATGTCCAATGTGTCATCTCTCCTTAATCAATCATTTGGGAATGGGGCTCCTAATACACATCCTGGTGCGGAGCCGGACCCTCTTTCTGGTGTTGGCAATGGAATGAACTTTAATAATCCTTCATCATCCTTTGTAGCATCCAATATGGCAAACCCCGTTTCGTCTGTCCAAGGGCAGAATCCTCAATTTTCTAACCTTTCTAGCAGCCAGTTGTTATCAGATCAGCAGCAGTCGCAACAACTAGAACCCCAGAACTTCCAACATAGTCAGCAGTCTATGGAACAGTTTTCTGCACTTCAGAGCAATCAACAACCACAATTTCAATCAATGCGAGGGTTGACTGGTGTTGGACCTGTAAAGTTGGAGCCTCAAGTGACGAGCAATGATCAACATGGACAGCAGCAGCAGCAGCATTTGCAAACTTTGAGAAACCTTGGTCCAGTGAAATTGGAATCACAACGGCTTCAGTCGATGAGAGGTTTGGCACCAGTAAAAATGGAACCCCAACAATCGGACCAGTCATTATTTCAGCAGCAGCAGCAACAACAGCATCAACATCAACATCAGCATCAGCATCCACATCAGCAACAACAGCAATCGCAACAATTTCTCCATATGTCTAGACAGTCCTCTCAGGCAGCGGCTGCCCAAATTAATTTAATGCACCAACAAAGGATTTTGCAATTGCAACAACAACATCAGCAACATCTCCTAAAAAGTATGCCTCCTCAACGGCCACAATTGCAACAACATTACCAACAGCAGAACCTTTCTCTGAGATCTCCTGTTAAACCAGGATATGAACCTGGAATGTGTGCCCGGCGTCTGACTCATTACATGTATCACCAGCAACACAGACCTGAAGATAACAACATAGATTTCTGGAGGAAATTTGTTAACGAGTACTTTGCACCTCATGCCAAAAAGAAATGGTGTGTGTCCATGTATGGAAGTGGACGACAAACAACAGGAGTTTTTCCTCAGGATGTATGGCATTGTGAAATATGCAACCGCAAGCCTGGGCGTGGCTTTGAAGCTACTGCTGAAGTTCTTCCCAGGCTTTTTAAGATCAAGTATGAAAGTGGTACTATGGAGGAACTACTTTATCTTGACATGCCTCGTGAATATCATAATGCATCTGGTCAGATTGTCTTGGATTATGCAAAAGCGATACAGGAAAGTGTTTTTGAGCAACTTCGTGTTGTCCGCGATGGCCAACTTCGAATTGTTTTTTCTCCAGATCTGAAGATATGTTCATGGGAATTCTGTGCTCGACGCCATGAAGAACTTATTCCTAGGAGATTATTGATACCTCAGGTTAGTCACCTTGGAGCAGCAGCTCAAAAGTACCAGTCTGCCATTCAAAACGCATCATCCAATTTATCAACTCCTGAATTGCAAAACAATTGTAACATGTTTGTGGCTTCAGCACGACAATTAGCTAAAGCCTTGGAAGTTCCGCTGGTAAATGACTTGGGATATACAAAGAGATATGTACGTTGTCTTCAGATATCCGAAGTGGTTAATAGCATGAAGGACTTGATTGATTACAGCAAAGAAACAGGGATTGGGCCAATGGATAGTTTAGCCAAGTTTCCTCGGAGGACTAGTTCATCATCGGGGGTTACAAATCAAGCTCAAATTTCTGATGAGCAGCAACAACAGCAATCATCCATAGCCCAGCACTCGAATAACAACCAGAGTTCTGTCCAGGCTTCTGTGGTGCAGCAGCTTACAGCTAGCAATGGTGTGACCAGTGTAAATAACCCCGCCAACCAACCTTCAACGTCAAACTCAGCAAGCACCATTGCTGGTCTTCTTCACCAAAATTCTATGAACTCAAGACAGCAGAACTCTATGGCTAATGCTAGCAACTCATATGGGGGAAGTAATGTTCAGATTCCATCTCCTGGGTCTTCCAGTACAATTCCACCTACGCAATCGAACCCTTCTACATTCCAGCCACCGACTCCCTCATCATCTAACAATCTTTCACAACCATCGCATGCAGCTGCAAAGAATGCCAATCAAATGAGTGCTGCCAATTCTCCGGCAAATATCTCTATGCAACAACCTGCCTTATCTGGAGATGCTGATCCTAGTGATACACAATCCTCAGTGCAAAAGATCTTACAAGAGATGATGATGAATAATCATATGAACGGGCCAAATAGTCTGGTTGGTGTCGGTTCGGTGGTCAATGATATGAAAAACGTGAATGGGGTCTTACCTACAAGTAGTACAGGTCTCAACAATGGGAATTGCATAGGCGGAAACGGAGCAACAAACGGTGGCTCAGGGATGGGAGGAGGTGGATATGGATCAATGGGGAGCGGGCTTGGGCAGCCTGCCATGGTTAATGGAATGAGAACTGCAATGGGAAATAACTCCATTATGAATAGACGAATAGGAATGGCATCGTTCGCTCTAGAACAAAGCATGAATGGTCAACCTCAGGATTTGGGAAACCAGCTTCTTAGTGGGTTAGGAGCTGTAAATGGCTTTAGCAATCTCCAATTTGACTGGAAGCCATCCCCATGA | 2721 | 44.62 | MVTSGPPTPMGGGAQSVSPSLLRSNSGLLGVQGGLLPSQAAFSSLVSPRNQFNNMNMLGNMSNVSSLLNQSFGNGAPNTHPGAEPDPLSGVGNGMNFNNPSSSFVASNMANPVSSVQGQNPQFSNLSSSQLLSDQQQSQQLEPQNFQHSQQSMEQFSALQSNQQPQFQSMRGLTGVGPVKLEPQVTSNDQHGQQQQQHLQTLRNLGPVKLESQRLQSMRGLAPVKMEPQQSDQSLFQQQQQQQHQHQHQHQHPHQQQQQSQQFLHMSRQSSQAAAAQINLMHQQRILQLQQQHQQHLLKSMPPQRPQLQQHYQQQNLSLRSPVKPGYEPGMCARRLTHYMYHQQHRPEDNNIDFWRKFVNEYFAPHAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTMEELLYLDMPREYHNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSHLGAAAQKYQSAIQNASSNLSTPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSKETGIGPMDSLAKFPRRTSSSSGVTNQAQISDEQQQQQSSIAQHSNNNQSSVQASVVQQLTASNGVTSVNNPANQPSTSNSASTIAGLLHQNSMNSRQQNSMANASNSYGGSNVQIPSPGSSSTIPPTQSNPSTFQPPTPSSSNNLSQPSHAAAKNANQMSAANSPANISMQQPALSGDADPSDTQSSVQKILQEMMMNNHMNGPNSLVGVGSVVNDMKNVNGVLPTSSTGLNNGNCIGGNGATNGGSGMGGGGYGSMGSGLGQPAMVNGMRTAMGNNSIMNRRIGMASFALEQSMNGQPQDLGNQLLSGLGAVNGFSNLQFDWKPSP | 906 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 18871533 | 18877825 | - | CrPI670011_08g005940.1 | Cre08g0594 | 505512 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre08g0594 | 906 | MobiDBLite | consensus disorder prediction | 674 | 739 | - | - | |
Cre08g0594 | 906 | MobiDBLite | consensus disorder prediction | 69 | 206 | - | - | |
Cre08g0594 | 906 | PANTHER | LIM DOMAIN-BINDING PROTEIN | 1 | 897 | IPR029005 | GO:0000122(PANTHER)|GO:0005634(PANTHER)|GO:0005667(PANTHER)|GO:0045944(PANTHER) | |
Cre08g0594 | 906 | MobiDBLite | consensus disorder prediction | 592 | 633 | - | - | |
Cre08g0594 | 906 | MobiDBLite | consensus disorder prediction | 225 | 274 | - | - | |
Cre08g0594 | 906 | MobiDBLite | consensus disorder prediction | 181 | 206 | - | - | |
Cre08g0594 | 906 | MobiDBLite | consensus disorder prediction | 227 | 274 | - | - | |
Cre08g0594 | 906 | MobiDBLite | consensus disorder prediction | 585 | 633 | - | - | |
Cre08g0594 | 906 | MobiDBLite | consensus disorder prediction | 92 | 171 | - | - | |
Cre08g0594 | 906 | Pfam | LIM-domain binding protein | 335 | 589 | IPR029005 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre08g0299 | Cre-Chr8:8940974 | Cre08g0594 | Cre-Chr8:18871533 | 4.50E-275 | dispersed | |
Cre08g0594 | Cre-Chr8:18871533 | Cre09g1967 | Cre-Chr9:38641534 | 5.40E-95 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre08g0594 | - | - | - | 0.0 |