Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre08g0640 ATGGCTGCAACTTCTGGTACTGTGCTTAATGGCTTGGGCTCACCCTTCCTCCGTGGAGGTAGCAGAACTCAGACCTTGTTGGCCGGAGCCAGAGGCGGTGTCAATGTTGTCGGCTCTCGTAAGCTTGTTGTCGTCGCGGCTGCTCAGCCCAAGAAGTCTTGGATCCCTGCTGTTAAGGGTGGCGGCAACTTGATCGACCCAGAATGGCTTGATGGCTCACTTCCAGGCGACTACGGCTTCGACCCACTAGGGTTGGGGAAGGACCCAGCCTTTCTGAAGTGGTACAGAGAGGCAGAGCTGATCCACGGGCGGTGGGCAATGGCAGCAGTGGTCGGAATCTTCGTAGGACAAGCGTGGAGTGGGATTCCATGGTTCGAAGCCGGAGCAGATCCAGGCGCAATCGCTCCATTCTCCTTCGGATCACTGCTAGGAACCCAGCTTCTGCTAATGGGATGGGTTGAAAGCAAGCGATGGGTGGATTTCTTCAACCCAGAATCTCAAGCGGTGGAATGGGCGACGCCATGGTCGAGAACAGCAGAGAACTTCGCAAACGCAACCGGAGAACAAGGGTATCCCGGAGGAAAATTCTTCGATCCATTGGGATTTGCAGGAACTATTAAAGATGGAGTTTACATTCCGGACACGGAGAAATTGGAGAGATTGAAGTTGGCGGAGATCAAGCATGCTAGAATCGCTATGTTAGCAATGCTCATCTTCTACTTTGAAGCTGGACAGGGGAAGACGCCATTGGGTGCTCTTGGATTGTAA 768 53.39 MAATSGTVLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVVVAAAQPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL 255
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 19328665 19329781 + CrPI670011_08g006400.1 Cre08g0640 505558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre08g0640 255 FunFam Chlorophyll a-b binding protein, chloroplastic 67 254 - -
Cre08g0640 255 Pfam Chlorophyll A-B binding protein 67 243 IPR022796 -
Cre08g0640 255 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 51 253 IPR001344 GO:0009416(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro)
Cre08g0640 255 SUPERFAMILY Chlorophyll a-b binding protein 62 255 - -
Cre08g0640 255 Gene3D Chlorophyll a/b binding protein domain 67 254 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre08g0640 Cre-Chr8:19328665 Cre08g1539 Cre-Chr8:28010777 3.50E-31 dispersed
Cre08g0640 Cre-Chr8:19328665 Cre01g1548 Cre-Chr1:28670063 7.00E-24 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre08g0640 K08917 - csv:101204705 502.671