Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre08g0643 ATGGATCCCAACAAATTAAACCTAAGTACTTTGGAGCAACAATCCAATTTGGAGATCCAAACAAAGGAATTCGACTACTCGAAACGTGCACAATGGCTACGTGCTGCCGTGCTTGGTGCCAACGACGGGCTCGTCTCGACCGCGTCGCTTATGATGGGAGTTGGAGCTGTGAAACAAGACATCAAGGCCATGATCCTCACCGGTTTCGCCGGGCTAGTCGCGGGGGCGTGTAGTATGGCGATCGGGGAGTTTGTGTCTGTTTACTCTCAATTAGACATTGAAATGGCTCAAATAAAAAGAGAGAAATTACAAAGAAGTAGTAATATAGAAGGAGTAGTACAAGGGCAAGAGAGCAAAGATGAAGAAAAATTACCAAATCCACTTCAAGCAGCTGCAGCCTCTGCCTTAGCTTTCTCTCTAGGAGCAATGGTGCCATTATTGGCAGCTTCCTTTATAAGAGAATATAAAGTAAGGCTGGCGGTGGTTGTGGCGGCGGTGACGTTAGCTCTCGTCGTGTTCGGGTGGTTGGGCGCGGTCCTTGGAAAAGCATCACCGATCAAATCGGCCGCTAGAGTGTTGGTCGGAGGTTGGTTAGCTATGGCTATAACGTTTGGCTTGACAAAGCTAATTGGAGCAAGCGGACTCTAG 648 48.15 MDPNKLNLSTLEQQSNLEIQTKEFDYSKRAQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEMAQIKREKLQRSSNIEGVVQGQESKDEEKLPNPLQAAAASALAFSLGAMVPLLAASFIREYKVRLAVVVAAVTLALVVFGWLGAVLGKASPIKSAARVLVGGWLAMAITFGLTKLIGASGL 215
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 19375151 19375798 + CrPI670011_08g006430.1 Cre08g0643 505561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre08g0643 215 Pfam VIT family 33 110 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Cre08g0643 215 Pfam VIT family 120 207 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Cre08g0643 215 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 11 211 IPR008217 GO:0005381(PANTHER)|GO:0005384(InterPro)|GO:0005384(PANTHER)|GO:0006880(PANTHER)|GO:0016020(PANTHER)|GO:0030026(InterPro)|GO:0030026(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre08g0643 Cre-Chr8:19375151 Cre09g0924 Cre-Chr9:9326938 1.40E-73 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre08g0643 K22736 - csv:101204048 370.933