Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre08g0753 ATGGCAACGCCGAAGCCTCGCACCACTCGGTCCAGGTCTCACAGGGATATTCCGGATTTGGAGAAGATGGACGCTGCTTACAGTTGGGACGCCCTTGAATGGACCAAGATTGAGCCTGTTCCGCGGTCGGTTTCGCGTGTCAACTTGGATTGCTTGCTTGAAGCGGAACAAGTGATTGCTGAGGGCTATGGTGTTGTTCTTGTGAATACTGATGAGGCGGGTACCTTGTTTGTAACCAATTTTCGTCTTCTATTTCTAAGTGAAGGAACCATGGATGTTATTGCCCTTGGGACTATACCACTGGCTACAATTGATAAATTCAACAAAATAGTTGTGAAGACAAATGCTGTCTCTCGCCAATCCGAAAAGTCTTCACCATCTAGGCGACTTCTTCAGGTCATTGGAAAAGACATGAGAATTATCGTCTTTGGTTTTCGTCCAAGAACAAAACAGAGGCGCAAAGTATATGATGCATTATTGAGGTGTATGAAGCCTGCAAGAATATGGGATCTATATGCATTCCAATCCGGGCCATCCAAGTACTGTAATACAGACCCAAAAGTTCGTTTGCTAAATGAGTATTTTCGGCTTCTTGGAAAGGGTTCCCTACATGCATCTATGAGTATGATTGAAGATGGATCATTTACATTGTCCAATGAATTGTGGAGAATAACTAAAATCAATTCCAATTATACTCTGTGTCAGAGTTATCCGTTTGCATTGGTCGTTCCTAAACACATTAGTGATGAAGAGATGTTGCAGGCTTCTACCTTTCGTGCCAGATGCCGTTTGCCTGTTGTTTCGTGGTGCAATCCTGGCACTGGAGCTGTTCTTGCACGTTCATCTCAACCTTTAGTTGGTCTTATGATGAATATGAGAAGTAATACCGATGAAAAGCTTGTTGCTGCCCTTTGCTCAAATCTTGCTGGTGGTCAAGGGTTATCACGTAGGAAGCTTTATATAGCTGATGCAAGGCCTAGAAAAAATGCTTTAGCAAATGGAGCCATGGGAGGTGGCTCAGAGTCTTCATCAAATTATTTTCAATCTGAGATAGTCTTTTTTGGGATTGACAACATACATGCAATGAGGGAAAGTCTTACTCAGCTCAGAGAGTACTTGGATACTCATGGTGAAAAATCATCTGATGGAATGTCATCATTCTTGAGACATGGTGGATGGACTTGGGGTGGGGGTAATCTTAGTAGCATGTCTGCATCTGTATCAACTCTGGGAGATAGTGGCTGGTTAATCCATGTTCAAAGTGTCTTGGCTGGTTCAGCATGGATTGCTGCACGTGTTGCTTTGGAAAATGCAACAGTGCTAGTTCATTGCAGTGACGGCTGGGACAGAACAACACAACTAGTTTCACTTGCTAGCTTACTGCTTGATCCATATTATCGGACGTTTGCTGGATTTCAGGCACTGGTTGAAAAGGATTGGCTAGCATTTGGTCATCCTTTCTCAGATCGGTCTGGCATGCCGACCATATCAGGAAGTGGTAACATGCCATATGAACTATCTAGGCAGTCTTCAACTGGAAGTTTTTCTTCACCTTTGCGTCAGCCATCAGGTGCATTCATATCTCAAGCTTCCAGTCCTCCTCATGCTCAAACATCCAACAACTGTTCTCCCATATTTTTACAGTGGGTTGATTGTGTTTCACAACTTCTGCGCATGTATCCCTTTGCGTTTGAGTTCTCTTCAGCATTCCTTGTGGATTTGTTGGATTGTATGCTTTCCTGTCGCTTTGGGAACTTCTTATGCAATTGTGAGAAGGAGCGGCAGCAATGTGCAGTTTCTGAAGTTTGCGGCTGTCTATGGGCGTATTTAGCTGATTTACGAGCCTCAGAAGGAAGTTCGCATGTGCACCATAACCTCTTTTATGATCCTACCAAACATGAAGGTCCTCTCTTACCTCCTGCAGCATCTCTAGCTCCAACTCTCTGGCCACAATTCCATCTTCGTTGGGCTTGTCCAAAAGAATCCCAAGCTGGGGAACTTGAAGTCAGATGCAGGAAAATGGCTATAAAATTCTCTGAAATGCAGAAGGACAAAGAAATAGCTGAGAGAAAAGCCCAGGAGATGACGGCTGCCATGGAATCATTAAAATCCGAGTTGCAAAACGAGAAACAGTTAAGTATATCTGCTAGGAATGCTGCAAAAAGTGCAAGCAAAGAATGCGAAGCCATAAAGAGAGCAATTCAGTCTCTAGGTTGCAAGGTTCAAGTCTCTAGTAATGGTTATTGTACTGTTGATATTGAGGGCGACCTGATGAAAAAATCCAACCAGAAAAGTCATCCTGCTTCAAGAAGGACTTCACATCGTTCGCTGCCACGCCCTAGTGAAGAGAATGACCTCTCCCTTTCTATCACAGTTACAGCAGATGATGTGCCAAGTAACCCCCTCAGTCACATCTGTGAAGCTCTTTGCCCATTACGCACTCGGGATGGAGGGTGCCGATGGCCTGATGCTGGTTGTGCTCATTTGGGTAGCCAATTTATTGGACTGAAGGCAAATTTCGACGCATTCGATCAACTATCCATATATGATGGTTATTTCAAGCCAGAGTGA 2571 44.07 MATPKPRTTRSRSHRDIPDLEKMDAAYSWDALEWTKIEPVPRSVSRVNLDCLLEAEQVIAEGYGVVLVNTDEAGTLFVTNFRLLFLSEGTMDVIALGTIPLATIDKFNKIVVKTNAVSRQSEKSSPSRRLLQVIGKDMRIIVFGFRPRTKQRRKVYDALLRCMKPARIWDLYAFQSGPSKYCNTDPKVRLLNEYFRLLGKGSLHASMSMIEDGSFTLSNELWRITKINSNYTLCQSYPFALVVPKHISDEEMLQASTFRARCRLPVVSWCNPGTGAVLARSSQPLVGLMMNMRSNTDEKLVAALCSNLAGGQGLSRRKLYIADARPRKNALANGAMGGGSESSSNYFQSEIVFFGIDNIHAMRESLTQLREYLDTHGEKSSDGMSSFLRHGGWTWGGGNLSSMSASVSTLGDSGWLIHVQSVLAGSAWIAARVALENATVLVHCSDGWDRTTQLVSLASLLLDPYYRTFAGFQALVEKDWLAFGHPFSDRSGMPTISGSGNMPYELSRQSSTGSFSSPLRQPSGAFISQASSPPHAQTSNNCSPIFLQWVDCVSQLLRMYPFAFEFSSAFLVDLLDCMLSCRFGNFLCNCEKERQQCAVSEVCGCLWAYLADLRASEGSSHVHHNLFYDPTKHEGPLLPPAASLAPTLWPQFHLRWACPKESQAGELEVRCRKMAIKFSEMQKDKEIAERKAQEMTAAMESLKSELQNEKQLSISARNAAKSASKECEAIKRAIQSLGCKVQVSSNGYCTVDIEGDLMKKSNQKSHPASRRTSHRSLPRPSEENDLSLSITVTADDVPSNPLSHICEALCPLRTRDGGCRWPDAGCAHLGSQFIGLKANFDAFDQLSIYDGYFKPE 856
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 20563003 20577014 - CrPI670011_08g007530.1 Cre08g0753 505671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre08g0753 856 Gene3D - 63 163 IPR011993 -
Cre08g0753 856 CDD PTP-MTM-like 262 555 - -
Cre08g0753 856 SMART gram2001c 43 111 IPR004182 -
Cre08g0753 856 ProSitePatterns Tyrosine specific protein phosphatases active site. 442 452 IPR016130 GO:0016311(InterPro)
Cre08g0753 856 SUPERFAMILY PH domain-like 51 175 - -
Cre08g0753 856 Coils Coil 678 719 - -
Cre08g0753 856 Pfam Myotubularin-like phosphatase domain 216 595 IPR010569 -
Cre08g0753 856 ProSiteProfiles Myotubularin phosphatase domain. 199 653 IPR010569 -
Cre08g0753 856 MobiDBLite consensus disorder prediction 760 786 - -
Cre08g0753 856 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 216 657 IPR029021 -
Cre08g0753 856 PANTHER MYOTUBULARIN-RELATED 50 790 IPR030564 GO:0004438(PANTHER)|GO:0106018(PANTHER)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre08g0753 K18081 - csv:101204839 1655.19