Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre08g0758 ATGGGCATTGTCATTCTCTTTGTCAAACTCTTTAGAAAAAACCCTCACAAAACTTACAAGTGGGAGCCCATTAAAGATGATATTGAACTTTCCCATTTTGCTTATCCCATGGTTTTGGTTCAAATTCCAATGTACAATGAAAAAGAGGTTTATCAATTGTCAATTGGAGCAGCATGTGGACTTTCATGGCCAACTGATAGGATCATAATTCAAGTTCTCGATGATTCTACTGATCCTTCTATCAAGGATCTGGTGGAATTAGAGTGCAAAAGATGGGCAAGCAAAGGGATAAACATAAAGTACGAGATCAGAGACAACAGAAATGGGTACAAAGCTGGGGCTTTAAAAGAAGGAATGAAGCATAATTACGTTAAACTTTGCGATTACGTCGCTATTTTCGATGCCGATTTCCAACCAGAGCCTGATTTTCTTTGGCGTACCATTCCATTTCTCACAAACAACCCTGAGATTGCTCTTGTTCAAGCTCGCTGGAAGTTCGTGAACTCAGATGAATGTTTGATGACAAGAATGCAAGAGATGTCATTGGATTATCATTTCAAAGTGGAGCAAGAAGTTGGATCTGCAACTTATGCCTTCTTTGGGTTCAATGGCACAGCAGGTGTTTGGAGAATTGCTGCACTGAATGAGGCTGGAGGATGGAAGGATCGGACCACTGTTGAAGATATGGATTTGGCTGTTCGAGCTAGCCTCAAAGGCTGGAAGTTTGTCTATGTAGGCGATCTCAAGGTGAAGAATGAATTGCCTAGTACCTTCAAAGCTTATCGGTATCAGCAACACCGGTGGTCTTGTGGCCCGGCGAACCTCTTCAAAAAGATGGTTGTTGAAATCATGAGGAACAAGGCATTCTCCCTGTGGAAGAAGCTTTACCTGATCTACAGCTTCTTCTTCGTTCGGAAGATCGTTGCCCATATTGTCACGTTTGTCTTTTATTGTGTTGTTTTGCCAGCTACAGTCATGGTTCCCGAAGTATCAGTACCAAAATGGGGTGCTGTATATATTCCTTCTATGATCACCCTCCTAAACGCAGTTGGAACTCCAAGATCATTCCACCTGATCATTTTCTGGATCCTCTTCGAGAACGTCATGTCGCTTCACCGAACAAAGGCAACATTCATTGGTCTGTTGGAAGCAGGGAGAGTAAATGAATGGGTCGTCACTGAGAAATTGGGAGATGCGCTAAAGACTAAACTGGGTTGCAAAGCTCCCCGGAAACCTCGTTTTAGAATCGGAGAAAGACTCCATATGCTTGAGCTTTGTGTTGGAGCCTACCTCTTCTTCTGTGGCTGGTACGATCTCAACTTCGGGAAGAACCGATACTTCATCTACCTCTTCCTTCAATCATTCGCCTTCTTCATCGCCGGAGTCGGTTACGTCGGAACTCTGGTTCCCAACTCTTAG 1419 43.48 MGIVILFVKLFRKNPHKTYKWEPIKDDIELSHFAYPMVLVQIPMYNEKEVYQLSIGAACGLSWPTDRIIIQVLDDSTDPSIKDLVELECKRWASKGINIKYEIRDNRNGYKAGALKEGMKHNYVKLCDYVAIFDADFQPEPDFLWRTIPFLTNNPEIALVQARWKFVNSDECLMTRMQEMSLDYHFKVEQEVGSATYAFFGFNGTAGVWRIAALNEAGGWKDRTTVEDMDLAVRASLKGWKFVYVGDLKVKNELPSTFKAYRYQQHRWSCGPANLFKKMVVEIMRNKAFSLWKKLYLIYSFFFVRKIVAHIVTFVFYCVVLPATVMVPEVSVPKWGAVYIPSMITLLNAVGTPRSFHLIIFWILFENVMSLHRTKATFIGLLEAGRVNEWVVTEKLGDALKTKLGCKAPRKPRFRIGERLHMLELCVGAYLFFCGWYDLNFGKNRYFIYLFLQSFAFFIAGVGYVGTLVPNS 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 20623609 20628000 + CrPI670011_08g007580.1 Cre08g0758 505676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre08g0758 472 FunFam Glucomannan 4-beta-mannosyltransferase 9 27 255 - -
Cre08g0758 472 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 1 468 - GO:0005794(PANTHER)|GO:0016757(PANTHER)|GO:0051753(PANTHER)
Cre08g0758 472 Pfam Glycosyl transferase family group 2 129 319 IPR001173 -
Cre08g0758 472 CDD CESA_CaSu_A2 36 272 - -
Cre08g0758 472 SUPERFAMILY Nucleotide-diphospho-sugar transferases 34 314 IPR029044 -
Cre08g0758 472 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 28 252 IPR029044 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre04g1068 Cre-Chr4:29345698 Cre08g0758 Cre-Chr8:20623609 2.70E-227 dispersed
Cre08g0758 Cre-Chr8:20623609 Cre08g1618 Cre-Chr8:28662765 8.20E-111 dispersed
Cre01g0579 Cre-Chr1:5071716 Cre08g0758 Cre-Chr8:20623609 3.70E-109 transposed
Cre10g2054 Cre-Chr10:35247490 Cre08g0758 Cre-Chr8:20623609 1.30E-218 wgd
Cre02g2494 Cre-Chr2:38211602 Cre08g0758 Cre-Chr8:20623609 1.10E-212 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre08g0758 K13680 - csv:101211547 952.199