Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre08g0804 ATGATGAACACCATGGGAATCTTTGAAGATATTGGCTTTTGCCGGAATCTTGAATATTTTTCGGCTCCTCCTGGGGAACAAGAGACAGCTCAGGAGCATGAAGCTGAGGCTGCTTTGGAGGAAGATTATAGTGATGAAGAGCTGGATGTTGATGAGCTTGAGAGAAGGATGTGGCGCGACCGTATGCTTTTGAGGCGACTCAAAGAACAAAGCAAAGAGAAGGAAGGCACTGACAATTCAAAGCAGCGCCAATCCCAGGAGCAGGCCCGAAGGAAGAAGATGTCTCGGGCTCAAGATGGGATCCTGAAGTATATGTTGAAAATGATGGAGGTCTGTAAAGCTCAAGGATTCGTTTATGGGATTATTCCTGAGAAAGGAAAGCCAGTTAGTGGAGCCTCTGATAATCTTCGTGCCTGGTGGAAAGAGAAAGTCAGATTCGACAGAAACGGCCCTGCAGCAATTGCCAAATATCAGGCTGATCATGCGATTCCTGGGAACAATGACGATTGCAATACAGTGGCATCCACTCCTCACACTTTACAAGAGCTCCAAGACACAACCCTTGGATCACTTTTGTCGGCTCTGATGCAGCACTGTGATCCACCCCAGAGGCGTTTTCCGTTGGAGAAGGGAGTTTCCCCGCCGTGGTGGCCCACCGGAAACGAGGAATGGTGGCCTGAACTAGGACTACCTAAGGACCAGGGGCCGCCCCCTTATAAGAAGCCCCATGATCTGAAGAAGGCTTGGAAAGTTAGTGTTCTCACTGCTGTGATTAAGCATATGTCACCCGATATTGCCAAGATTCGCAAGCTTGTTCGTCAGTCTAAGTGCTTGCAAGACAAGATGACTGCAAAGGAGAGTGCTACATGGTTGGCCATTGTAAACCAGGAAGAAGCTTTGGCTAGGAAATTGTTTCCTGATAAATGCCCACCTGTGTCGATTTGCGGGAGCGGATCTCTTTTGATCAGTGACACAAGTGATTACGATGTCGAAGGAGTTGAAGATGAACCAAATGTTGAAGCAGAGGAAAGCAAACCGCATGATCTCAATTTCTTTAATATGGGAGCTCCTGGATCTAGAGAGAGACTCATGATGGCACCTGTGGGAGCACAGATTAAGGAAGAATTCATGGAGAACAATTCAGACTTCAATCAAAAGAGGAAGCAGATGGCAGATGAGTCCAATACAATAATGAATCCGAAAATATATACTTGCGAGTATTCTCAATGCCCTTATAACAGTCAGCGCCTTGGGTTTCTCGACAGGACTTCAAGAAACAACCACCAGTTGAATTGCCCATTTAGGACTGATTCTTCCCATATATTTAGCATGCCAAGCTTTCAAACTAACGATGACAAATCATCATCGCCTGCTCCTCCATCCTGTAATCATCCTAAGCCACCTACTCGGCTGATGAACCCGACTCCACCCTTTAGGGTATCAGGACTTGGGCTTCCAGAAGATGGCCAGAAAATGATTTCTGACCTTCTGAGTTTCTACGATTCTAACCTTCAACAGGACAAACCTTTGAGTTCCGGTAATGTTGACATTAGAGACAATCACAACCAACAGCAACAACTGCCAAAATTCCAGCTCCAAGTCGATGATAGCTTGTATTGTCAAGCAGCAATGGTGGGAAATAGTATACCAATTCAGCAGCAGCAGCAGCCTGATTTTTCTTCTACCAAACTTCCATTCGATGAGTACAAGGCGGCAGCATTCGATTCTCCATTCGGCATGTATCCCAACGATAACATCTCCGACTTCAGATTTGGTTCTCCATTTAATTTGGCATCAATTGATTATGCAGCAGTAGACACACCATTGCCCAAACAAGATACTCCCTTATGGTACCTTTGA 1860 45.81 MMNTMGIFEDIGFCRNLEYFSAPPGEQETAQEHEAEAALEEDYSDEELDVDELERRMWRDRMLLRRLKEQSKEKEGTDNSKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNLRAWWKEKVRFDRNGPAAIAKYQADHAIPGNNDDCNTVASTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWWPTGNEEWWPELGLPKDQGPPPYKKPHDLKKAWKVSVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIVNQEEALARKLFPDKCPPVSICGSGSLLISDTSDYDVEGVEDEPNVEAEESKPHDLNFFNMGAPGSRERLMMAPVGAQIKEEFMENNSDFNQKRKQMADESNTIMNPKIYTCEYSQCPYNSQRLGFLDRTSRNNHQLNCPFRTDSSHIFSMPSFQTNDDKSSSPAPPSCNHPKPPTRLMNPTPPFRVSGLGLPEDGQKMISDLLSFYDSNLQQDKPLSSGNVDIRDNHNQQQQLPKFQLQVDDSLYCQAAMVGNSIPIQQQQQPDFSSTKLPFDEYKAAAFDSPFGMYPNDNISDFRFGSPFNLASIDYAAVDTPLPKQDTPLWYL 619
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 21113576 21115435 + CrPI670011_08g008040.1 Cre08g0804 505722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre08g0804 619 FunFam Ethylene insensitive 3-like 1 83 161 - -
Cre08g0804 619 Coils Coil 36 70 - -
Cre08g0804 619 MobiDBLite consensus disorder prediction 69 94 - -
Cre08g0804 619 MobiDBLite consensus disorder prediction 24 46 - -
Cre08g0804 619 Pfam Ethylene insensitive 3, DNA-binding domain 51 298 IPR047091 GO:0003700(InterPro)
Cre08g0804 619 MobiDBLite consensus disorder prediction 443 476 - -
Cre08g0804 619 FunFam Ethylene insensitive 3-like 1 171 308 - -
Cre08g0804 619 Coils Coil 373 393 - -
Cre08g0804 619 Gene3D - 83 163 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Cre08g0804 619 MobiDBLite consensus disorder prediction 460 474 - -
Cre08g0804 619 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 7 608 IPR006957 GO:0003677(PANTHER)|GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(InterPro)
Cre08g0804 619 MobiDBLite consensus disorder prediction 443 459 - -
Cre08g0804 619 Gene3D - 175 308 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Cre08g0804 619 SUPERFAMILY DNA-binding domain of EIN3-like 177 301 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g1623 Cre-Chr3:32187983 Cre08g0804 Cre-Chr8:21113576 3.70E-100 dispersed
Cre03g1685 Cre-Chr3:33604496 Cre08g0804 Cre-Chr8:21113576 3.30E-200 dispersed
Cre07g1328 Cre-Chr7:28038929 Cre08g0804 Cre-Chr8:21113576 2.90E-84 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
54169 PF04873 EIN3 3.60E-132 No_clan Cre TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre08g0804 K14514 - csv:101214396 1134.01