Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre08g0804 | ATGATGAACACCATGGGAATCTTTGAAGATATTGGCTTTTGCCGGAATCTTGAATATTTTTCGGCTCCTCCTGGGGAACAAGAGACAGCTCAGGAGCATGAAGCTGAGGCTGCTTTGGAGGAAGATTATAGTGATGAAGAGCTGGATGTTGATGAGCTTGAGAGAAGGATGTGGCGCGACCGTATGCTTTTGAGGCGACTCAAAGAACAAAGCAAAGAGAAGGAAGGCACTGACAATTCAAAGCAGCGCCAATCCCAGGAGCAGGCCCGAAGGAAGAAGATGTCTCGGGCTCAAGATGGGATCCTGAAGTATATGTTGAAAATGATGGAGGTCTGTAAAGCTCAAGGATTCGTTTATGGGATTATTCCTGAGAAAGGAAAGCCAGTTAGTGGAGCCTCTGATAATCTTCGTGCCTGGTGGAAAGAGAAAGTCAGATTCGACAGAAACGGCCCTGCAGCAATTGCCAAATATCAGGCTGATCATGCGATTCCTGGGAACAATGACGATTGCAATACAGTGGCATCCACTCCTCACACTTTACAAGAGCTCCAAGACACAACCCTTGGATCACTTTTGTCGGCTCTGATGCAGCACTGTGATCCACCCCAGAGGCGTTTTCCGTTGGAGAAGGGAGTTTCCCCGCCGTGGTGGCCCACCGGAAACGAGGAATGGTGGCCTGAACTAGGACTACCTAAGGACCAGGGGCCGCCCCCTTATAAGAAGCCCCATGATCTGAAGAAGGCTTGGAAAGTTAGTGTTCTCACTGCTGTGATTAAGCATATGTCACCCGATATTGCCAAGATTCGCAAGCTTGTTCGTCAGTCTAAGTGCTTGCAAGACAAGATGACTGCAAAGGAGAGTGCTACATGGTTGGCCATTGTAAACCAGGAAGAAGCTTTGGCTAGGAAATTGTTTCCTGATAAATGCCCACCTGTGTCGATTTGCGGGAGCGGATCTCTTTTGATCAGTGACACAAGTGATTACGATGTCGAAGGAGTTGAAGATGAACCAAATGTTGAAGCAGAGGAAAGCAAACCGCATGATCTCAATTTCTTTAATATGGGAGCTCCTGGATCTAGAGAGAGACTCATGATGGCACCTGTGGGAGCACAGATTAAGGAAGAATTCATGGAGAACAATTCAGACTTCAATCAAAAGAGGAAGCAGATGGCAGATGAGTCCAATACAATAATGAATCCGAAAATATATACTTGCGAGTATTCTCAATGCCCTTATAACAGTCAGCGCCTTGGGTTTCTCGACAGGACTTCAAGAAACAACCACCAGTTGAATTGCCCATTTAGGACTGATTCTTCCCATATATTTAGCATGCCAAGCTTTCAAACTAACGATGACAAATCATCATCGCCTGCTCCTCCATCCTGTAATCATCCTAAGCCACCTACTCGGCTGATGAACCCGACTCCACCCTTTAGGGTATCAGGACTTGGGCTTCCAGAAGATGGCCAGAAAATGATTTCTGACCTTCTGAGTTTCTACGATTCTAACCTTCAACAGGACAAACCTTTGAGTTCCGGTAATGTTGACATTAGAGACAATCACAACCAACAGCAACAACTGCCAAAATTCCAGCTCCAAGTCGATGATAGCTTGTATTGTCAAGCAGCAATGGTGGGAAATAGTATACCAATTCAGCAGCAGCAGCAGCCTGATTTTTCTTCTACCAAACTTCCATTCGATGAGTACAAGGCGGCAGCATTCGATTCTCCATTCGGCATGTATCCCAACGATAACATCTCCGACTTCAGATTTGGTTCTCCATTTAATTTGGCATCAATTGATTATGCAGCAGTAGACACACCATTGCCCAAACAAGATACTCCCTTATGGTACCTTTGA | 1860 | 45.81 | MMNTMGIFEDIGFCRNLEYFSAPPGEQETAQEHEAEAALEEDYSDEELDVDELERRMWRDRMLLRRLKEQSKEKEGTDNSKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNLRAWWKEKVRFDRNGPAAIAKYQADHAIPGNNDDCNTVASTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWWPTGNEEWWPELGLPKDQGPPPYKKPHDLKKAWKVSVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIVNQEEALARKLFPDKCPPVSICGSGSLLISDTSDYDVEGVEDEPNVEAEESKPHDLNFFNMGAPGSRERLMMAPVGAQIKEEFMENNSDFNQKRKQMADESNTIMNPKIYTCEYSQCPYNSQRLGFLDRTSRNNHQLNCPFRTDSSHIFSMPSFQTNDDKSSSPAPPSCNHPKPPTRLMNPTPPFRVSGLGLPEDGQKMISDLLSFYDSNLQQDKPLSSGNVDIRDNHNQQQQLPKFQLQVDDSLYCQAAMVGNSIPIQQQQQPDFSSTKLPFDEYKAAAFDSPFGMYPNDNISDFRFGSPFNLASIDYAAVDTPLPKQDTPLWYL | 619 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 21113576 | 21115435 | + | CrPI670011_08g008040.1 | Cre08g0804 | 505722 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre08g0804 | 619 | FunFam | Ethylene insensitive 3-like 1 | 83 | 161 | - | - | |
Cre08g0804 | 619 | Coils | Coil | 36 | 70 | - | - | |
Cre08g0804 | 619 | MobiDBLite | consensus disorder prediction | 69 | 94 | - | - | |
Cre08g0804 | 619 | MobiDBLite | consensus disorder prediction | 24 | 46 | - | - | |
Cre08g0804 | 619 | Pfam | Ethylene insensitive 3, DNA-binding domain | 51 | 298 | IPR047091 | GO:0003700(InterPro) | |
Cre08g0804 | 619 | MobiDBLite | consensus disorder prediction | 443 | 476 | - | - | |
Cre08g0804 | 619 | FunFam | Ethylene insensitive 3-like 1 | 171 | 308 | - | - | |
Cre08g0804 | 619 | Coils | Coil | 373 | 393 | - | - | |
Cre08g0804 | 619 | Gene3D | - | 83 | 163 | IPR023278 | GO:0003700(InterPro)|GO:0005634(InterPro) | |
Cre08g0804 | 619 | MobiDBLite | consensus disorder prediction | 460 | 474 | - | - | |
Cre08g0804 | 619 | PANTHER | ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN | 7 | 608 | IPR006957 | GO:0003677(PANTHER)|GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(InterPro) | |
Cre08g0804 | 619 | MobiDBLite | consensus disorder prediction | 443 | 459 | - | - | |
Cre08g0804 | 619 | Gene3D | - | 175 | 308 | IPR023278 | GO:0003700(InterPro)|GO:0005634(InterPro) | |
Cre08g0804 | 619 | SUPERFAMILY | DNA-binding domain of EIN3-like | 177 | 301 | IPR023278 | GO:0003700(InterPro)|GO:0005634(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre03g1623 | Cre-Chr3:32187983 | Cre08g0804 | Cre-Chr8:21113576 | 3.70E-100 | dispersed | |
Cre03g1685 | Cre-Chr3:33604496 | Cre08g0804 | Cre-Chr8:21113576 | 3.30E-200 | dispersed | |
Cre07g1328 | Cre-Chr7:28038929 | Cre08g0804 | Cre-Chr8:21113576 | 2.90E-84 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
54169 | PF04873 | EIN3 | 3.60E-132 | No_clan | Cre | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre08g0804 | K14514 | - | csv:101214396 | 1134.01 |