Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre08g0809 | ATGGAGAAGTTCCCTGTTTATTCTCTTCATTCCCTGTTGATGTTTCTATTCATTTTGAGTCTCATCGTTCCAAGTCAGCCTCTTCTGACTGAGACTCTAGCATTGCTTCGTTTCAAAGAGAATCTCAAAGACCCGACTGGTGTTCTTCATTCTTGGATTGATTCTGAATCCCCTTGTGGATTCTCTGGGATTACTTGCGATCAGGTTTCCAGGAAAGTCGTAGAAATTTCCTTGGAAAACAAGTCGCTTTCTGGTGAGATTTCTCCCTCCATTTCTGTTCTGCAAAGTCTCACAACACTTTCATTGGCCTCAAACCACATTTCTGGGGAGCTTCCCTACCAATTGATCAACTGTAGCAATCTTAGAGTATTGAATCTCACTGATAATGAAATGGTTAAGAGGATTCCTGATCTTTCTCAGCTGAGGAAGTTGGAGGTTCTAGATCTGTCAATCAACTTCTTTTCTGGCCAATTTCCAAGCTGGGTTGGAAATTTAACTGGATTGGTTTCTCTGGGACTTGGTGAAAATGAGTTTGAGGCTGGTGAGATACCGGAATCTATTGGAAATTTGAAGAACTTAACTTGGCTATATCTGGCAAATGCACAATTGAGAGGGGAAATACCAGAGTCTCTCTTTGAATTAAAGGCATTAGAGACATTGGATCTTTCAAGGAACAAGCTTTCTGGTAAACTCTCCAAGTCAATATCCAAGTTGAATAATCTGAATAAGCTTGAGCTTTTTGTTAACAAATTGACTGGAGAAATCCCACCAGAGATTTCAAATCTTACCCTTCTGCAAGAAATTGATATGTCTGCAAATAGTTTGTATGGCCAGTTGCCAGAAGAGGTTGGAAACCTGAGGAATTTGGTGGTTTTTCAATTGTATGAAAACAACTTCTCTGGAAAGCTTCCTGAAGGGTTTGGAAATATGCAAAACCTTATTGCATTTTCAATCTATAGGAACAATTTTTCTGGAGAATTTCCAGTAAACTTCGGCAGATTCGCTCCGCTCAACAGCATTGACATATCAGAGAATCAATTTTCAGGGAACTTTCCCAAGTTCTTGTGTGAGAATAGGAAGTTGCAGTTCTTACTTGCTTTGGAAAATAGATTTTCAGGAGAGCTGCCACTTTCTTTAGCTGACTGCAAATCAATCCAAAGATTCAGAATCAATAATAATCAAATGTCTGGGAGGATTCCAGATGGGTTATGGGCTCTTCCTAATGCAAAAATGATTGATTTTAGTGATAATGAATTCACTGGAACTATATCCCCAAACATTGGTTTATCTACCAGCTTGAGCCAGTTGGTTTTGCCAAACAATAAGTTTTCAGGTAAACTTCCATCAGAGCTTGGCAAGTTGACAAATTTAGAGAGGCTTTACTTGAGTAACAATGAATTCAATGGAGAAATACCTTCTGAAATTGGTTTCCTCAAGCAACTTTCATCATTACACCTGGAAGTAAATTCTTTGAATGGCTCAATCCCATTAGAGATTGGTAATTGTGAAAGACTTGTGGACATAAATTTTGCTCAAAACTCTCTTAGTGGTAGCATTCCATCTTCGTTTGCGTTAATCAGCTCTTTGAACTCACTGAACCTCTCAAGCAACAAACTTACAGGTATAATCCCAGAATCCTTGGAGAAGATGAAACTAAGTTCGATCGATTTTTCGGGAAATCAGCTGTTCGGGAGAGTTCCATCCAGTCTTCTGGCAATGAGTGGAGACAAAGCATTTTTGGACAACAAAGAACTCTGTGTTGATGAAAACTACAGAGAAAGGATAAATACCAGCCTGGTTACTTGTACTGGAAAGCATAGTCAGAAAGGGGTGCTTAATGATAAACTTGTATTTTTCAGTATCATAGTTTCCATCTTGGTTTGTGTATTAGCAGGGCTAGTGTTGGTAAGTTGTAATTACTTGAAGCTCGGTGAGAATGGCCTAGATACCAGTCAGGAAGGGGACCAACAAGGAATTCCAAAATGGAAAATTGCATCATTCCATCAAGTGGAAATTGATGCAGATGAAATATGCAGTTTTAAAGAAGACAATTTGATAGGGAGTGGAGGAACGGGAAAAGTTTATCGGTTGGATCTGAAGAAAAACGGTGGTACAGTGGCTGTTAAGCAGCTCTGGAAAGGAGATGCAATGAAGGTTTTGGCAGCAGAAATGGAGATTCTGGGAAAGATAAGGCATAGAAACATCTTGAAGCTCTATGCCTGCTTAATGAGAGAAGGATCTAGTTATCTAGTTTTTGAATATATGACCAATGGTAACCTGTGTGAAGCACTTCAGAGACAGATCAAGGGTGGACAGCCTGAACTGAACTGGTATCAGAGGTACAGGATTGCATTGGGAGCAGCCAGGGGAATTGCTTACTTGCACCATGATTGTTCACCACCTATAATTCATAGAGATATAAAGTCAACAAACATACTTCTTGATGAAGATTATGAACCAAAAATTGCTGATTTTGGGGTTGCAAAAGTTGCAGATCAGTTTCAAAGTGCTTCTGAGCACAGCTCTCTTGCTGGCACTCATGGCTATATTGCTCCTGAGCTAGCGTATACTCTGAAAGTTTCCGAAAAAAGTGATGTGTACAGTTATGGTGTGGTGCTATTAGAATTGATTACTGGAAGGAGACCAATAGAAGATGAATATGGAGAAGGAAAAGATATAGTCTACTGGATCTCAACACACCTCGATGACCGTGATAATGTCCTCAAGCTTCTAGATATCAAAGTTGCATCTGAAGCCGTCCAAAATGACATGATTAAAGTCCTGAAGATTGCTGTACTTTGCACAACAAAGCTTCCATCACTTCGCCCTTCAATGAGAGAGGTAGTGAAGATGCTATCGGACGCTGATCCCTACTCTTCTTCAGTGTCCCTGAACAACAGTTCAAATAAAAACATTAAGGATTTTGTTTAG | 2931 | 39.61 | MEKFPVYSLHSLLMFLFILSLIVPSQPLLTETLALLRFKENLKDPTGVLHSWIDSESPCGFSGITCDQVSRKVVEISLENKSLSGEISPSISVLQSLTTLSLASNHISGELPYQLINCSNLRVLNLTDNEMVKRIPDLSQLRKLEVLDLSINFFSGQFPSWVGNLTGLVSLGLGENEFEAGEIPESIGNLKNLTWLYLANAQLRGEIPESLFELKALETLDLSRNKLSGKLSKSISKLNNLNKLELFVNKLTGEIPPEISNLTLLQEIDMSANSLYGQLPEEVGNLRNLVVFQLYENNFSGKLPEGFGNMQNLIAFSIYRNNFSGEFPVNFGRFAPLNSIDISENQFSGNFPKFLCENRKLQFLLALENRFSGELPLSLADCKSIQRFRINNNQMSGRIPDGLWALPNAKMIDFSDNEFTGTISPNIGLSTSLSQLVLPNNKFSGKLPSELGKLTNLERLYLSNNEFNGEIPSEIGFLKQLSSLHLEVNSLNGSIPLEIGNCERLVDINFAQNSLSGSIPSSFALISSLNSLNLSSNKLTGIIPESLEKMKLSSIDFSGNQLFGRVPSSLLAMSGDKAFLDNKELCVDENYRERINTSLVTCTGKHSQKGVLNDKLVFFSIIVSILVCVLAGLVLVSCNYLKLGENGLDTSQEGDQQGIPKWKIASFHQVEIDADEICSFKEDNLIGSGGTGKVYRLDLKKNGGTVAVKQLWKGDAMKVLAAEMEILGKIRHRNILKLYACLMREGSSYLVFEYMTNGNLCEALQRQIKGGQPELNWYQRYRIALGAARGIAYLHHDCSPPIIHRDIKSTNILLDEDYEPKIADFGVAKVADQFQSASEHSSLAGTHGYIAPELAYTLKVSEKSDVYSYGVVLLELITGRRPIEDEYGEGKDIVYWISTHLDDRDNVLKLLDIKVASEAVQNDMIKVLKIAVLCTTKLPSLRPSMREVVKMLSDADPYSSSVSLNNSSNKNIKDFV | 976 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 21155273 | 21158488 | - | CrPI670011_08g008090.1 | Cre08g0809 | 505727 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre08g0809 | 976 | Gene3D | Ribonuclease Inhibitor | 28 | 180 | IPR032675 | - | |
Cre08g0809 | 976 | ProSiteProfiles | Leucine-rich repeat profile. | 120 | 142 | IPR001611 | GO:0005515(InterPro) | |
Cre08g0809 | 976 | FunFam | leucine-rich repeat receptor-like protein kinase TDR | 755 | 963 | - | - | |
Cre08g0809 | 976 | FunFam | Leucine-rich receptor-like protein kinase family protein | 670 | 754 | - | - | |
Cre08g0809 | 976 | Gene3D | Transferase(Phosphotransferase) domain 1 | 755 | 973 | - | - | |
Cre08g0809 | 976 | Gene3D | Ribonuclease Inhibitor | 315 | 593 | IPR032675 | - | |
Cre08g0809 | 976 | PRINTS | Leucine-rich repeat signature | 217 | 230 | - | - | |
Cre08g0809 | 976 | PRINTS | Leucine-rich repeat signature | 526 | 539 | - | - | |
Cre08g0809 | 976 | Gene3D | Ribonuclease Inhibitor | 181 | 239 | IPR032675 | - | |
Cre08g0809 | 976 | Gene3D | Ribonuclease Inhibitor | 240 | 312 | IPR032675 | - | |
Cre08g0809 | 976 | Pfam | Protein kinase domain | 681 | 950 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre08g0809 | 976 | SUPERFAMILY | L domain-like | 251 | 573 | - | - | |
Cre08g0809 | 976 | ProSiteProfiles | Protein kinase domain profile. | 680 | 959 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre08g0809 | 976 | ProSitePatterns | Protein kinases ATP-binding region signature. | 686 | 709 | IPR017441 | GO:0005524(InterPro) | |
Cre08g0809 | 976 | SUPERFAMILY | Protein kinase-like (PK-like) | 677 | 952 | IPR011009 | - | |
Cre08g0809 | 976 | ProSiteProfiles | Leucine-rich repeat profile. | 528 | 549 | IPR001611 | GO:0005515(InterPro) | |
Cre08g0809 | 976 | FunFam | Receptor-like protein kinase HSL1 | 290 | 594 | - | - | |
Cre08g0809 | 976 | FunFam | Leucine-rich repeat receptor protein kinase EMS1 | 207 | 289 | - | - | |
Cre08g0809 | 976 | SMART | LRR_typ_2 | 454 | 478 | IPR003591 | - | |
Cre08g0809 | 976 | SMART | LRR_typ_2 | 262 | 286 | IPR003591 | - | |
Cre08g0809 | 976 | SMART | LRR_typ_2 | 190 | 214 | IPR003591 | - | |
Cre08g0809 | 976 | SMART | LRR_typ_2 | 94 | 118 | IPR003591 | - | |
Cre08g0809 | 976 | SMART | LRR_typ_2 | 526 | 549 | IPR003591 | - | |
Cre08g0809 | 976 | SMART | LRR_typ_2 | 141 | 165 | IPR003591 | - | |
Cre08g0809 | 976 | SUPERFAMILY | L domain-like | 57 | 305 | - | - | |
Cre08g0809 | 976 | SMART | serkin_6 | 680 | 959 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre08g0809 | 976 | FunFam | Probable inactive receptor kinase RLK902 | 28 | 182 | - | - | |
Cre08g0809 | 976 | Pfam | Leucine Rich Repeat | 143 | 165 | IPR001611 | GO:0005515(InterPro) | |
Cre08g0809 | 976 | Pfam | Leucine Rich Repeat | 96 | 118 | IPR001611 | GO:0005515(InterPro) | |
Cre08g0809 | 976 | Pfam | Leucine Rich Repeat | 288 | 310 | IPR001611 | GO:0005515(InterPro) | |
Cre08g0809 | 976 | Pfam | Leucine Rich Repeat | 240 | 262 | IPR001611 | GO:0005515(InterPro) | |
Cre08g0809 | 976 | Pfam | Leucine Rich Repeat | 456 | 478 | IPR001611 | GO:0005515(InterPro) | |
Cre08g0809 | 976 | Pfam | Leucine Rich Repeat | 528 | 550 | IPR001611 | GO:0005515(InterPro) | |
Cre08g0809 | 976 | Pfam | Leucine Rich Repeat | 217 | 238 | IPR001611 | GO:0005515(InterPro) | |
Cre08g0809 | 976 | Pfam | Leucine rich repeat N-terminal domain | 30 | 67 | IPR013210 | - | |
Cre08g0809 | 976 | Gene3D | Phosphorylase Kinase; domain 1 | 650 | 754 | - | - | |
Cre08g0809 | 976 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 802 | 814 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre08g0809 | 976 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 | 328 | 954 | IPR051564 | GO:0016020(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre06g0941 | Cre-Chr6:2821371 | Cre08g0809 | Cre-Chr8:21155273 | 1.30E-38 | dispersed | |
Cre08g0809 | Cre-Chr8:21155273 | Cre08g1139 | Cre-Chr8:24599080 | 1.70E-78 | dispersed | |
Cre02g0572 | Cre-Chr2:2785059 | Cre08g0809 | Cre-Chr8:21155273 | 1.60E-07 | wgd | |
Cre02g1412 | Cre-Chr2:24573965 | Cre08g0809 | Cre-Chr8:21155273 | 3.90E-15 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64331 | PF00069 | Pkinase | 2.00E-48 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre08g0809 | - | - | - | 0.0 |