Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre08g0871 ATGGGTGGCGGTGGCGGTAGCAGCGGTGTTGTGCCAAGTAGGGAGTTAGATCAAACTCCGACATGGGCCGTTGCCGCTGTTTGTGCAATCATCATTCTTATTTCTATTATATTGGAAAAGGTTCTTCACATGGTTGGAGAGCTATTCCAAAAAAGGAAAAAGAAAGCATTGTATGAAGCGCTTGAGAAAGTTAAAGGCGAGCTTATGGTTTTAGGATTCATTTCTTTGCTCTTAACATTCGGACAAAATTATATTGCTAAAGTTTGCATACCCTCAAAATATGCAAATACTATGTTGCCTTGCCCTTATAGAGGGACTCTACCTAAAAGCTCCCACGGCCTCGAACCCCAAGATCACGACGAAGAGACTACAGATCATCACCGTAGGCTTCTTTGGTATGAGCATCGACGTCGTCTTGGTGGCAGTGCTTCCATAGAAAGTTGCAAATCAGGGTATACACAACTTATATCTTTAAATGGTTTGCATCAAATACATATCTTCATCTTCTTTCTAGCCGTCCTCCATGTTGTATTTAGCGGCATAACCATGACTCTTGGGAGATTGAAAATTCGTGGGTGGAAGGTTTGGGAAAAACAGACTGAACAAGAACATGACGCCATGAACGATCCTACAAGGTTCAGACTTACTCACGAGACTTCCTTTGTTAGAGATCACAGCAGTTTTTGGACCAAAACACCCCTCTCCTTTTACTTTGTATGCTTTTGGAGGCAATTCTTGAGGTCCGTTAGTAGGGCAGATTACTTGTCTCTTAGACATGGTTTTGTTACCGTTCATTTAGCCCCGGGGAGTAAATTTGACTTTCAAAAGTACATCAAAAGATCATTAGAAGATGACTTTAAGGTGGTCGTGGGAATCAGTCCTCTACTATGGGCATCAATGGTGCTTTTTCTACTTCTCAATGTTAGTGGGTGGCAAGTTATGTTTTGGGTGTCCATATTTCCTCTAGTGGTGATCTTAGCTGTTGGAACGAAGCTACAAGGAATTATAACACAAATGGCTCTCGAAATCAAGGAAAGGCATGCAGTGGTTCAAGGGATTCCCCTCGTCCAAGTCTCCGATAGACACTTTTGGTTTAGTTGGCCGGTTTTGGTTCTTTATCTCATCCATTATGTCCTCTTCCAGTATGAATTTGGGTTGAGATCATGTTTTCACGACAATTTTGATCTTATTATCATCAGAGTTGCCCTTGGGGTTGGTGTCCAAATTTTGTGCAGCTACATTACACTTCCATTATATGCACTTGTTACTCAGATGGGATCAACAATGAAGAAATCCATATTTGATGAACAAACTTCAAAAGCATTAAAGCAATGGCATAGAAGTGCTTTGAAGAAAAAGAACGAAGGGGGAAAGCCCGATTCAACGCCGATGCGAACTTTAGGCGGCGGCGGCGGAGGAGGAGGAAGCCCCCCCGAGTCACCGACGCAATCCCCGCGTGAATTCCAACATCAATTGGTCTCTCAACCGTTGCCAACCGACGTCGAAGCCTCCACCATTCCTTCAGCCAACATAATGACCACCGTTGATCTCCATCAACATCAGCAAAACTATACCAATCGTGACTTATTGAGCTGA 1596 43.23 MGGGGGSSGVVPSRELDQTPTWAVAAVCAIIILISIILEKVLHMVGELFQKRKKKALYEALEKVKGELMVLGFISLLLTFGQNYIAKVCIPSKYANTMLPCPYRGTLPKSSHGLEPQDHDEETTDHHRRLLWYEHRRRLGGSASIESCKSGYTQLISLNGLHQIHIFIFFLAVLHVVFSGITMTLGRLKIRGWKVWEKQTEQEHDAMNDPTRFRLTHETSFVRDHSSFWTKTPLSFYFVCFWRQFLRSVSRADYLSLRHGFVTVHLAPGSKFDFQKYIKRSLEDDFKVVVGISPLLWASMVLFLLLNVSGWQVMFWVSIFPLVVILAVGTKLQGIITQMALEIKERHAVVQGIPLVQVSDRHFWFSWPVLVLYLIHYVLFQYEFGLRSCFHDNFDLIIIRVALGVGVQILCSYITLPLYALVTQMGSTMKKSIFDEQTSKALKQWHRSALKKKNEGGKPDSTPMRTLGGGGGGGGSPPESPTQSPREFQHQLVSQPLPTDVEASTIPSANIMTTVDLHQHQQNYTNRDLLS 531
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 21835728 21842918 - CrPI670011_08g008710.1 Cre08g0871 505789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre08g0871 531 MobiDBLite consensus disorder prediction 477 505 - -
Cre08g0871 531 MobiDBLite consensus disorder prediction 445 505 - -
Cre08g0871 531 PANTHER MLO-LIKE PROTEIN 1 13 493 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cre08g0871 531 Pfam Mlo family 14 464 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cre08g0871 531 MobiDBLite consensus disorder prediction 445 459 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre04g1720 Cre-Chr4:35340647 Cre08g0871 Cre-Chr8:21835728 8.50E-171 dispersed
Cre06g0828 Cre-Chr6:1616964 Cre08g0871 Cre-Chr8:21835728 4.80E-96 dispersed
Cre08g0871 Cre-Chr8:21835728 Cre10g0276 Cre-Chr10:1660330 2.70E-155 dispersed
Cre01g0581 Cre-Chr1:5087952 Cre08g0871 Cre-Chr8:21835728 1.00E-43 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre08g0871 K08472 - csv:101208890 926.776