Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre08g0879 | ATGAGTTGCTTTTTTTGTGTTACTCCTCGTACTCAGGATGGGAGCCGGGTCGAGTCTGACAGTCGTGTTCGATTTGAATCCCGGCATTCTGTTAATTCCTCAGGTACATGGAGGGGAAAAGAAGGTGAGAGCAACAGGGAAAGTTGTCCGAAGGGGAGCGCAGCTGCTCGTAGTTTTACGTTCCGTGAACTCGCAATGGCTACAAGAGGTTTCAAGGAAGTAAATTTGCTTGGGGAGGGTGGTTTTGGACGTGTTTACAAAGGACGTTTGGAATCCGGACAGATTGTTGCAGTTAAACAGCTTAATCGTGATGGGCTTCAAGGCTTTCAAGAATTCATTGTGGAGGTTCTCATGTTGAGTCTGTTGCACCATCCCAATCTCGTTACCTTGATCGGTTACTGTACTGATGGAGATCAAAGGCTTTTGGTTTATGAGTACATGCCTATGGGAAGCCTGGAAGATCATCTGTTTGATTTGGGTACTGACAAAAAGCCACTGAGTTGGAATACAAGGATGAAGATTGCAGTCGCTGCTGCCCGAGGTCTTGAGTATCTCCACTGTAAAGCAAATCCCCCAGTCATATATCGTGACTTGAAATCAGCTAATATCTTACTGGACAATGACTTCAATCCTAAGCTTTCAGATTTCGGATTAGCTAAACTGGGACCTGTTGGTGACAATACTCATGTTTCAACTAGAGTAATGGGAACGTATGGGTATTGTGCTCCAGAGTACGCCATGAGTGGTAAATTAACCCTTAAATCTGATATTTACAGCTTTGGTGTGGTTCTGCTTGAGCTTATTACGGGGCGCAAGGTAATTGATACAAAAAGGAGACCAGGAGAGCAGAACTTAGTTGCTTGGTCCCGTCCTATACTTAAGGACCGGAGAAAGTTCGCGGAATTAGTTGATCCCCTGTTGGAAGGACACTTCCCTCTTCGTTGTTTGCAACATGCAGTTGCAATTACTGCAATGTGTCTACAGGAACAACCATCATTTCGCCCTCTTATAAGTGATATTGTTGTAGCACTCGAAATGACACCCATGCCCAGGAATCAGATCCCTGAAATTGCTAAACTTCTGTTTGGAGGTTGCTGTATAGAAGTTGCTGAAAAAGCTATGTGCATAGACATGTGTGAAGCGTGTTAG | 1149 | 44.47 | MSCFFCVTPRTQDGSRVESDSRVRFESRHSVNSSGTWRGKEGESNRESCPKGSAAARSFTFRELAMATRGFKEVNLLGEGGFGRVYKGRLESGQIVAVKQLNRDGLQGFQEFIVEVLMLSLLHHPNLVTLIGYCTDGDQRLLVYEYMPMGSLEDHLFDLGTDKKPLSWNTRMKIAVAAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKVIDTKRRPGEQNLVAWSRPILKDRRKFAELVDPLLEGHFPLRCLQHAVAITAMCLQEQPSFRPLISDIVVALEMTPMPRNQIPEIAKLLFGGCCIEVAEKAMCIDMCEAC | 382 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 21917162 | 21921109 | + | CrPI670011_08g008790.1 | Cre08g0879 | 505797 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre08g0879 | 382 | ProSiteProfiles | Protein kinase domain profile. | 71 | 347 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre08g0879 | 382 | PANTHER | OS07G0668900 PROTEIN | 34 | 348 | - | - | |
Cre08g0879 | 382 | FunFam | probable serine/threonine-protein kinase RLCKVII | 42 | 146 | - | - | |
Cre08g0879 | 382 | SMART | serkin_6 | 71 | 349 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre08g0879 | 382 | FunFam | Serine/threonine-protein kinase PBS1 | 147 | 359 | - | - | |
Cre08g0879 | 382 | Pfam | Protein kinase domain | 72 | 340 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre08g0879 | 382 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 193 | 205 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre08g0879 | 382 | Gene3D | Phosphorylase Kinase; domain 1 | 42 | 146 | - | - | |
Cre08g0879 | 382 | ProSitePatterns | Protein kinases ATP-binding region signature. | 77 | 99 | IPR017441 | GO:0005524(InterPro) | |
Cre08g0879 | 382 | SUPERFAMILY | Protein kinase-like (PK-like) | 52 | 348 | IPR011009 | - | |
Cre08g0879 | 382 | Gene3D | Transferase(Phosphotransferase) domain 1 | 147 | 355 | - | - | |
Cre08g0879 | 382 | CDD | STKc_IRAK | 77 | 345 | - | - | |
Cre08g0879 | 382 | MobiDBLite | consensus disorder prediction | 32 | 51 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre08g0879 | Cre-Chr8:21917162 | Cre11g2267 | Cre-Chr11:34447006 | 4.40E-155 | dispersed | |
Cre10g1853 | Cre-Chr10:33120983 | Cre08g0879 | Cre-Chr8:21917162 | 1.40E-58 | dispersed | |
Cre08g0879 | Cre-Chr8:21917162 | Cre08g0881 | Cre-Chr8:21924314 | 2.60E-25 | proximal | |
Cre11g2237 | Cre-Chr11:34151206 | Cre08g0879 | Cre-Chr8:21917162 | 2.70E-64 | wgd | |
Cre02g0678 | Cre-Chr2:3742944 | Cre08g0879 | Cre-Chr8:21917162 | 3.00E-77 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64335 | PF00069 | Pkinase | 3.90E-48 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre08g0879 | - | - | - | 0.0 |