Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre08g0922 ATGAGCCTACGCAAGGGCTCTAAGGTTTGGGTGGAAGATAAAGATTTTGCTTGGGTGGCAGCTGAAGTCCTCGACTTCGTTGGCAAACAAGTTCGAGTTTCAACTGTTACTGGAAAGAAGGTGTTGGCTCTTCCTGAGAAGCTTTTGCCGAGGGACGCGGATGAGGATGACCATGGAGGAGTGGATGACATGACGAAGTTGACCTATTTGAATGAGCCTGGCGTGCTTTATAATCTTCAAAGAAGATATTCTCTCAATGACATATATACATACACTGGTAGCATTTTGATTGCTGTTAATCCATTCACAAAGCTTCCCCATCTATACAATGTTCACATGATGGAGCAGTACAAGGGAGCACCTTTTGGGGAACTGAGCCCTCATGTTTTTGCTGTTGCTGATGCATCGTACAGAGCAATGATTAGTGAGGGTCGAAGCCAGTCTATATTGGTCAGTGGAGAGAGTGGGGCAGGGAAAACTGAGACAACAAAATTGATTATGCAGTATCTTACATTTGTTGGAGGGCGAGCGTCAGGGGATAACAGAACTGTTGAGCAACAAGTTCTTGAAGTAAGGGTTACTGTCTATCAGTCCAATTCCATACTTCGTTTTGGAAAGTTTGTTGAAATTCAATTTGATACCAATGGTAGAATATCGGGTGCTGCAATTAGAACTTATCTTCTGGAACGGTCTCGTGTTGTACAAATCACGAACCCTGAGAGGAACTATCATTGTTTTTATCAGCTATGTGCATCCGGAAGGGATGCCGAGAAGTACAACTTAAACCACCCGAGTCATTTCCGATACTTAAATCAAAGCAAGACCTATGAGTTAGATGGAGTGAGCAATGCTGAAGAGTATATTAGGACAAGGAGGGCAATGGACATAGTTGGTATCAGTCATGAGGATCAGGAAGCTATCTTTCGTACCTTGGCCGCGATTTTGCATCTGGGGAACGTTGAGTTTTCTCCTGGAAAAGAACACGATTCTTCAGTCTTGAAGGACGAAAAGTCTACCTTTCATTTAGGGGTGGCTTCTAATCTTCTCATGTGTGATTCCAACCTCTTGGTCTCAGCCCTTTGTACTCGTTCAATTCAAACTCGTGAAGGAATTATTGTCAAAGCGCTAGACTGCGAAGGTGCTGTTGCTAGTCGGGATGCACTGGCAAAGACTGTTTATGCTCGTCTGTTTGATTGGCTTGTTGATAAGATTAACCGTTCTGTCGGGCAAGATTTAAATTCTCAATTTCAAATTGGGTTACTGGACATTTACGGTTTTGAATGCTTTAAGGACAATAGTTTTGAGCAGTTTTGCATCAACTTTGCAAATGAAAAGCTTCAGCAACATTTTAACGAGCATGTCTTTAAGATGGAACAGGAGGAGTATAGCAAAGAGGAAATAAATTGGAGCTACATTGAATTCATTGACAATCAGGATGTGTTGGATTTGATTGAGAAGAAACCTATTGGGATCATTGGTTTGCTGGATGAGGCTTGTATGTTCCCAAGATCAACTCATGAAACATTCTCAACCAAATTGTTTCAGAATTTTCGTACTCATCCCAGGCTGGAAAGAACAAAATTTTCAGAAACAGATTTCACCCTTTCTCATTATGCTGGAAAGGTCACTTATCATACAGATACCTTTTTAGACAAAAATCGCGATTATGTTGTAGTAGAGCATTGCAATCTATTGGCTTCTTCTAAATGCAATTTTGTTGCTGGCCTTTTCTCTTCCTTACCAGAGGAATCTTCAAGATCATCGTATAAATTTTCTTCAGTAGCCTCAAGATTTAAGCAACAACTTCAAGCACTCATGGAGACATTGAATTCTACCGAGCCCCATTATGTACGCTGTGTGAAGCCAAACTCTCTTAATAGGCCCCAGAAGTTTGAGAACCTAAGCATTCTGCATCAATTACGTTGTGGGGGTGTTTTGGAGGCTGTTCGAATAAGTCTAGCAGGTTATCCCACCAGACGAACTTATGCAGAGTTCATTGACCGTTTTGGTTTGTTGGCACCTGATTTATTGGATGGAAGCTACGATGAAAGATTGATTACAGAAAAGATTCTACAAAAGTTGAAGTTAAAAAATTTTCAGTTGGGTAGGACCAAAGTGTTTCTTAGGGCTGGTCAAATTGGAATACTGGATGCTCGAAGAGCTGAAGTATTAGACAATGCTGCAAAGTGCATTCAACGCCGATTACGAACATATCATGCGCGCCGGGATTTTCTATTGATGCGTTCTACTGCAATTGCACTCCAAGCATATTGCAGAGGATGCCTTGCCCGAAATTTTTATGTAGCAAAACGAGAAAGCACTGCTGCCACTACGATACAGAAATATATTCGCAGGTGGTTCTTCAGGAATATTTATTTGGAGATCTATTCAGCTGCTCTAACCATACAGTCCAGTATTCGTGGTTTTGCAACTCGCAGTAGGTTTTTGCATGATAGAAGAAATAAAGCTGCGGTATTAATTCAGGCTCGATGGAGGACATTCAAAGTTCGTGCTGTTTTCCATCGCCACCAAGCTTCTATTATTGCAATACAATGTCGATGGAGGCAAAAGCTTGCAAAAAGGGAACTTCGTAGACTTAAACAGGAGGCTAATGAAGCTGGAGCATTGCGTTTAGCTAAAAACAAACTTGAGAAGCAGTTGGAAGATCTTACATGGCGATTGCATTTGGAGAAAAGATTGCGGGCTTCCAATGAAGAGGCCAAGTCAAACGAAATATTAAAATTGCAAAAGATGCTGGAATCCTTGAGTCTGGAGCTAGATGCAGCTAAATTGGCTGCAATCAATGAGTGCAACAAAAATGCTGTGCTGCAAAACCAAATGGAATTGTTGGCCAAGGAGAAGTCTGCTTTTGAAAGAGAAATTGTAGCGGTAGTTGAATTAAAAAAAGAAAATGCTTTCCTCAAGAGTGCTTTGGAGGCCATGGAAAAACGGAACTCAGCTCTGGAAGTTAAGCTTGTTGAGGCACAAAAGGATGGTAGCCACACTGTTGAAAAGTTGCAGGATGTTGAACAGAAATGCACTAAGCTTCAACAGAATGTGAAAAGTCTTGAAGAGAAACTCTCAGTTCTAGAGGACGAGAATCATGTATTGCGACAGAAAGCCTTAAGTGCAACTCCAAGGAGCAACCGACCCAATTTTGTAAGGGCATTATCGGAGAAATCCTCGGTTGCGCTTGTCCCTAATGCTGATCGGAAAACTCTATTCGAGTCACCAACACCCACAAAACTGGTTGCACCTTTTTCACAAGGTCTTTCTGAATCACGGCGAACAAAATTAACTGTAGAGAGACACCAGGAAAACTATGAAGTCCTTTCTAGGTGTATTAAAGAAAATTTGGGGTTTAAAGGTGGCAAGCCACTGGCCGCTTGCATCATCTACAAATGCCTTCTTAACTGGCATGCCTTTGAATCGGAACGAACAGTTATTTTTGACTATATAATTGAAGGAATCAATGATGCCCTCAAGGCTGGGGACGAGAATATTACCTTGCCATATTGGTTGTCAAATGCGTCTGCATTACTATGCCTCTTGCAAAGAAATTTAAAGTCAAATGGTTTTTTGAGTGCAGCTTCTCAGCGTTCCACAGGTTCCACTGGCTTAGCTAGCAGGATTTCTCAGGGATTAAAATCACCCTTCAAATATATTGGGTTTGAAGATGGGATTTCTCATCTTGAAGCAAGATATCCGGCAATATTGTTTAAACAACAATTAACTGCTTGTGTGGAGAAGATCTTTGGATTGATCCGTGATAATTTGAAGAAAGAATTATCTCCATTGCTGAGCTCATGTATTCAGGCACCAAAAGCTGCACGAGTACATGCTGGGAAGTCCTCTAGATCGCCTGGTGTTCCCCAGCCATCTACAAGTAGTCCATGGGATAACATAATAAAGTTTTTAGATTCTTTGATGAGTCGATTACGTGCGAATCATGTACCGTCTTTCTTCATTCGTAAATTGATTACTCAGGTGTTCTCGTTCATCAATATTTCACTTTTTAATAGCCTTCTTCTACGACGTGAATGTTGTACGTTTTCAAATGGGGAGTACGTGAAATCTGGTCTTGCAGAACTAGAGAAGTGGATTGGCAATGCAACAGAGGAGTATTCAGGGACCTCTTGGCACGAGCTAAACTATATAAGGCAAGCTGTCGGGTTTCTGGTAATACATCAGAAGCGAAAGAAATCACTAGAAGAGATAAGACAGGATCTTTGCCCCGCATTGACAGTGAGACAAATTTATCGCATTAGTACTATGTATTGGGATGATAAATACGGGACTCAGAGTGTGTCAAACGAGGTGGTTGCTCAAATGAGGGAAATTCTGAACAAGGACAATCAGAACTTAACCTCAAATTCATTTTTATTGGATGATGATCTGAGCATCCCATTCTCTACTGAAGACATTGATATGGCTCTTCCCCTCCTTGAACCGTCGGACATTGAACTTCCCACTTTCCTGTCGGAATACCCCTGTGCGCAATTTCTGGTCGAGCAGCAAAAGTAG 4524 41.49 MSLRKGSKVWVEDKDFAWVAAEVLDFVGKQVRVSTVTGKKVLALPEKLLPRDADEDDHGGVDDMTKLTYLNEPGVLYNLQRRYSLNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKGAPFGELSPHVFAVADASYRAMISEGRSQSILVSGESGAGKTETTKLIMQYLTFVGGRASGDNRTVEQQVLEVRVTVYQSNSILRFGKFVEIQFDTNGRISGAAIRTYLLERSRVVQITNPERNYHCFYQLCASGRDAEKYNLNHPSHFRYLNQSKTYELDGVSNAEEYIRTRRAMDIVGISHEDQEAIFRTLAAILHLGNVEFSPGKEHDSSVLKDEKSTFHLGVASNLLMCDSNLLVSALCTRSIQTREGIIVKALDCEGAVASRDALAKTVYARLFDWLVDKINRSVGQDLNSQFQIGLLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYSKEEINWSYIEFIDNQDVLDLIEKKPIGIIGLLDEACMFPRSTHETFSTKLFQNFRTHPRLERTKFSETDFTLSHYAGKVTYHTDTFLDKNRDYVVVEHCNLLASSKCNFVAGLFSSLPEESSRSSYKFSSVASRFKQQLQALMETLNSTEPHYVRCVKPNSLNRPQKFENLSILHQLRCGGVLEAVRISLAGYPTRRTYAEFIDRFGLLAPDLLDGSYDERLITEKILQKLKLKNFQLGRTKVFLRAGQIGILDARRAEVLDNAAKCIQRRLRTYHARRDFLLMRSTAIALQAYCRGCLARNFYVAKRESTAATTIQKYIRRWFFRNIYLEIYSAALTIQSSIRGFATRSRFLHDRRNKAAVLIQARWRTFKVRAVFHRHQASIIAIQCRWRQKLAKRELRRLKQEANEAGALRLAKNKLEKQLEDLTWRLHLEKRLRASNEEAKSNEILKLQKMLESLSLELDAAKLAAINECNKNAVLQNQMELLAKEKSAFEREIVAVVELKKENAFLKSALEAMEKRNSALEVKLVEAQKDGSHTVEKLQDVEQKCTKLQQNVKSLEEKLSVLEDENHVLRQKALSATPRSNRPNFVRALSEKSSVALVPNADRKTLFESPTPTKLVAPFSQGLSESRRTKLTVERHQENYEVLSRCIKENLGFKGGKPLAACIIYKCLLNWHAFESERTVIFDYIIEGINDALKAGDENITLPYWLSNASALLCLLQRNLKSNGFLSAASQRSTGSTGLASRISQGLKSPFKYIGFEDGISHLEARYPAILFKQQLTACVEKIFGLIRDNLKKELSPLLSSCIQAPKAARVHAGKSSRSPGVPQPSTSSPWDNIIKFLDSLMSRLRANHVPSFFIRKLITQVFSFINISLFNSLLLRRECCTFSNGEYVKSGLAELEKWIGNATEEYSGTSWHELNYIRQAVGFLVIHQKRKKSLEEIRQDLCPALTVRQIYRISTMYWDDKYGTQSVSNEVVAQMREILNKDNQNLTSNSFLLDDDLSIPFSTEDIDMALPLLEPSDIELPTFLSEYPCAQFLVEQQK 1507
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 22370890 22416632 - CrPI670011_08g009220.1 Cre08g0922 505840
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre08g0922 1507 FunFam Myosin heavy chain 241 295 - -
Cre08g0922 1507 Pfam DIL domain 1326 1429 IPR002710 -
Cre08g0922 1507 CDD MyosinXI_CBD 1102 1473 IPR037975 GO:0007015(InterPro)
Cre08g0922 1507 Coils Coil 964 998 - -
Cre08g0922 1507 Gene3D - 241 298 - -
Cre08g0922 1507 Coils Coil 856 900 - -
Cre08g0922 1507 Coils Coil 912 932 - -
Cre08g0922 1507 ProSiteProfiles IQ motif profile. 747 776 - -
Cre08g0922 1507 Coils Coil 1006 1040 - -
Cre08g0922 1507 SMART DIL_2 1325 1432 IPR002710 -
Cre08g0922 1507 SMART MYSc_2a 53 722 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cre08g0922 1507 Gene3D - 655 722 - -
Cre08g0922 1507 PANTHER MYOSIN 818 1448 - GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER)
Cre08g0922 1507 Gene3D Myosin VI head, motor domain, U50 subdomain 300 590 - -
Cre08g0922 1507 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 4 53 IPR004009 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cre08g0922 1507 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 50 768 IPR027417 -
Cre08g0922 1507 Gene3D - 821 871 - -
Cre08g0922 1507 Gene3D - 723 773 - -
Cre08g0922 1507 Gene3D - 774 820 - -
Cre08g0922 1507 ProSiteProfiles IQ motif profile. 797 824 - -
Cre08g0922 1507 ProSiteProfiles Dilute domain profile. 1151 1450 IPR002710 -
Cre08g0922 1507 ProSiteProfiles IQ motif profile. 843 872 - -
Cre08g0922 1507 Gene3D Kinesin motor domain 62 651 IPR036961 -
Cre08g0922 1507 CDD MYSc_Myo11 73 709 IPR036018 -
Cre08g0922 1507 SMART iq_5 746 768 IPR000048 GO:0005515(InterPro)
Cre08g0922 1507 SMART iq_5 819 841 IPR000048 GO:0005515(InterPro)
Cre08g0922 1507 SMART iq_5 771 793 IPR000048 GO:0005515(InterPro)
Cre08g0922 1507 SMART iq_5 794 816 IPR000048 GO:0005515(InterPro)
Cre08g0922 1507 SMART iq_5 842 864 IPR000048 GO:0005515(InterPro)
Cre08g0922 1507 SMART iq_5 723 745 IPR000048 GO:0005515(InterPro)
Cre08g0922 1507 Pfam Myosin head (motor domain) 61 709 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cre08g0922 1507 ProSiteProfiles Myosin motor domain profile. 59 721 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cre08g0922 1507 Gene3D - 427 612 - -
Cre08g0922 1507 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 776 870 IPR027417 -
Cre08g0922 1507 Coils Coil 940 960 - -
Cre08g0922 1507 ProSiteProfiles IQ motif profile. 820 849 - -
Cre08g0922 1507 PRINTS Myosin heavy chain signature 146 171 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cre08g0922 1507 PRINTS Myosin heavy chain signature 417 445 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cre08g0922 1507 PRINTS Myosin heavy chain signature 185 212 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cre08g0922 1507 PRINTS Myosin heavy chain signature 89 108 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cre08g0922 1507 PRINTS Myosin heavy chain signature 470 498 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cre08g0922 1507 Pfam IQ calmodulin-binding motif 775 792 IPR000048 GO:0005515(InterPro)
Cre08g0922 1507 Pfam IQ calmodulin-binding motif 797 815 IPR000048 GO:0005515(InterPro)
Cre08g0922 1507 Pfam IQ calmodulin-binding motif 726 744 IPR000048 GO:0005515(InterPro)
Cre08g0922 1507 Pfam IQ calmodulin-binding motif 751 764 IPR000048 GO:0005515(InterPro)
Cre08g0922 1507 Pfam IQ calmodulin-binding motif 822 840 IPR000048 GO:0005515(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre08g0922 Cre-Chr8:22370890 Cre09g0341 Cre-Chr9:3326430 0.00E+00 dispersed
Cre08g0922 Cre-Chr8:22370890 Cre06g0901 Cre-Chr6:2375693 0.00E+00 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre08g0922 K10357 - csv:101210527 2851.23