Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre08g0922 | ATGAGCCTACGCAAGGGCTCTAAGGTTTGGGTGGAAGATAAAGATTTTGCTTGGGTGGCAGCTGAAGTCCTCGACTTCGTTGGCAAACAAGTTCGAGTTTCAACTGTTACTGGAAAGAAGGTGTTGGCTCTTCCTGAGAAGCTTTTGCCGAGGGACGCGGATGAGGATGACCATGGAGGAGTGGATGACATGACGAAGTTGACCTATTTGAATGAGCCTGGCGTGCTTTATAATCTTCAAAGAAGATATTCTCTCAATGACATATATACATACACTGGTAGCATTTTGATTGCTGTTAATCCATTCACAAAGCTTCCCCATCTATACAATGTTCACATGATGGAGCAGTACAAGGGAGCACCTTTTGGGGAACTGAGCCCTCATGTTTTTGCTGTTGCTGATGCATCGTACAGAGCAATGATTAGTGAGGGTCGAAGCCAGTCTATATTGGTCAGTGGAGAGAGTGGGGCAGGGAAAACTGAGACAACAAAATTGATTATGCAGTATCTTACATTTGTTGGAGGGCGAGCGTCAGGGGATAACAGAACTGTTGAGCAACAAGTTCTTGAAGTAAGGGTTACTGTCTATCAGTCCAATTCCATACTTCGTTTTGGAAAGTTTGTTGAAATTCAATTTGATACCAATGGTAGAATATCGGGTGCTGCAATTAGAACTTATCTTCTGGAACGGTCTCGTGTTGTACAAATCACGAACCCTGAGAGGAACTATCATTGTTTTTATCAGCTATGTGCATCCGGAAGGGATGCCGAGAAGTACAACTTAAACCACCCGAGTCATTTCCGATACTTAAATCAAAGCAAGACCTATGAGTTAGATGGAGTGAGCAATGCTGAAGAGTATATTAGGACAAGGAGGGCAATGGACATAGTTGGTATCAGTCATGAGGATCAGGAAGCTATCTTTCGTACCTTGGCCGCGATTTTGCATCTGGGGAACGTTGAGTTTTCTCCTGGAAAAGAACACGATTCTTCAGTCTTGAAGGACGAAAAGTCTACCTTTCATTTAGGGGTGGCTTCTAATCTTCTCATGTGTGATTCCAACCTCTTGGTCTCAGCCCTTTGTACTCGTTCAATTCAAACTCGTGAAGGAATTATTGTCAAAGCGCTAGACTGCGAAGGTGCTGTTGCTAGTCGGGATGCACTGGCAAAGACTGTTTATGCTCGTCTGTTTGATTGGCTTGTTGATAAGATTAACCGTTCTGTCGGGCAAGATTTAAATTCTCAATTTCAAATTGGGTTACTGGACATTTACGGTTTTGAATGCTTTAAGGACAATAGTTTTGAGCAGTTTTGCATCAACTTTGCAAATGAAAAGCTTCAGCAACATTTTAACGAGCATGTCTTTAAGATGGAACAGGAGGAGTATAGCAAAGAGGAAATAAATTGGAGCTACATTGAATTCATTGACAATCAGGATGTGTTGGATTTGATTGAGAAGAAACCTATTGGGATCATTGGTTTGCTGGATGAGGCTTGTATGTTCCCAAGATCAACTCATGAAACATTCTCAACCAAATTGTTTCAGAATTTTCGTACTCATCCCAGGCTGGAAAGAACAAAATTTTCAGAAACAGATTTCACCCTTTCTCATTATGCTGGAAAGGTCACTTATCATACAGATACCTTTTTAGACAAAAATCGCGATTATGTTGTAGTAGAGCATTGCAATCTATTGGCTTCTTCTAAATGCAATTTTGTTGCTGGCCTTTTCTCTTCCTTACCAGAGGAATCTTCAAGATCATCGTATAAATTTTCTTCAGTAGCCTCAAGATTTAAGCAACAACTTCAAGCACTCATGGAGACATTGAATTCTACCGAGCCCCATTATGTACGCTGTGTGAAGCCAAACTCTCTTAATAGGCCCCAGAAGTTTGAGAACCTAAGCATTCTGCATCAATTACGTTGTGGGGGTGTTTTGGAGGCTGTTCGAATAAGTCTAGCAGGTTATCCCACCAGACGAACTTATGCAGAGTTCATTGACCGTTTTGGTTTGTTGGCACCTGATTTATTGGATGGAAGCTACGATGAAAGATTGATTACAGAAAAGATTCTACAAAAGTTGAAGTTAAAAAATTTTCAGTTGGGTAGGACCAAAGTGTTTCTTAGGGCTGGTCAAATTGGAATACTGGATGCTCGAAGAGCTGAAGTATTAGACAATGCTGCAAAGTGCATTCAACGCCGATTACGAACATATCATGCGCGCCGGGATTTTCTATTGATGCGTTCTACTGCAATTGCACTCCAAGCATATTGCAGAGGATGCCTTGCCCGAAATTTTTATGTAGCAAAACGAGAAAGCACTGCTGCCACTACGATACAGAAATATATTCGCAGGTGGTTCTTCAGGAATATTTATTTGGAGATCTATTCAGCTGCTCTAACCATACAGTCCAGTATTCGTGGTTTTGCAACTCGCAGTAGGTTTTTGCATGATAGAAGAAATAAAGCTGCGGTATTAATTCAGGCTCGATGGAGGACATTCAAAGTTCGTGCTGTTTTCCATCGCCACCAAGCTTCTATTATTGCAATACAATGTCGATGGAGGCAAAAGCTTGCAAAAAGGGAACTTCGTAGACTTAAACAGGAGGCTAATGAAGCTGGAGCATTGCGTTTAGCTAAAAACAAACTTGAGAAGCAGTTGGAAGATCTTACATGGCGATTGCATTTGGAGAAAAGATTGCGGGCTTCCAATGAAGAGGCCAAGTCAAACGAAATATTAAAATTGCAAAAGATGCTGGAATCCTTGAGTCTGGAGCTAGATGCAGCTAAATTGGCTGCAATCAATGAGTGCAACAAAAATGCTGTGCTGCAAAACCAAATGGAATTGTTGGCCAAGGAGAAGTCTGCTTTTGAAAGAGAAATTGTAGCGGTAGTTGAATTAAAAAAAGAAAATGCTTTCCTCAAGAGTGCTTTGGAGGCCATGGAAAAACGGAACTCAGCTCTGGAAGTTAAGCTTGTTGAGGCACAAAAGGATGGTAGCCACACTGTTGAAAAGTTGCAGGATGTTGAACAGAAATGCACTAAGCTTCAACAGAATGTGAAAAGTCTTGAAGAGAAACTCTCAGTTCTAGAGGACGAGAATCATGTATTGCGACAGAAAGCCTTAAGTGCAACTCCAAGGAGCAACCGACCCAATTTTGTAAGGGCATTATCGGAGAAATCCTCGGTTGCGCTTGTCCCTAATGCTGATCGGAAAACTCTATTCGAGTCACCAACACCCACAAAACTGGTTGCACCTTTTTCACAAGGTCTTTCTGAATCACGGCGAACAAAATTAACTGTAGAGAGACACCAGGAAAACTATGAAGTCCTTTCTAGGTGTATTAAAGAAAATTTGGGGTTTAAAGGTGGCAAGCCACTGGCCGCTTGCATCATCTACAAATGCCTTCTTAACTGGCATGCCTTTGAATCGGAACGAACAGTTATTTTTGACTATATAATTGAAGGAATCAATGATGCCCTCAAGGCTGGGGACGAGAATATTACCTTGCCATATTGGTTGTCAAATGCGTCTGCATTACTATGCCTCTTGCAAAGAAATTTAAAGTCAAATGGTTTTTTGAGTGCAGCTTCTCAGCGTTCCACAGGTTCCACTGGCTTAGCTAGCAGGATTTCTCAGGGATTAAAATCACCCTTCAAATATATTGGGTTTGAAGATGGGATTTCTCATCTTGAAGCAAGATATCCGGCAATATTGTTTAAACAACAATTAACTGCTTGTGTGGAGAAGATCTTTGGATTGATCCGTGATAATTTGAAGAAAGAATTATCTCCATTGCTGAGCTCATGTATTCAGGCACCAAAAGCTGCACGAGTACATGCTGGGAAGTCCTCTAGATCGCCTGGTGTTCCCCAGCCATCTACAAGTAGTCCATGGGATAACATAATAAAGTTTTTAGATTCTTTGATGAGTCGATTACGTGCGAATCATGTACCGTCTTTCTTCATTCGTAAATTGATTACTCAGGTGTTCTCGTTCATCAATATTTCACTTTTTAATAGCCTTCTTCTACGACGTGAATGTTGTACGTTTTCAAATGGGGAGTACGTGAAATCTGGTCTTGCAGAACTAGAGAAGTGGATTGGCAATGCAACAGAGGAGTATTCAGGGACCTCTTGGCACGAGCTAAACTATATAAGGCAAGCTGTCGGGTTTCTGGTAATACATCAGAAGCGAAAGAAATCACTAGAAGAGATAAGACAGGATCTTTGCCCCGCATTGACAGTGAGACAAATTTATCGCATTAGTACTATGTATTGGGATGATAAATACGGGACTCAGAGTGTGTCAAACGAGGTGGTTGCTCAAATGAGGGAAATTCTGAACAAGGACAATCAGAACTTAACCTCAAATTCATTTTTATTGGATGATGATCTGAGCATCCCATTCTCTACTGAAGACATTGATATGGCTCTTCCCCTCCTTGAACCGTCGGACATTGAACTTCCCACTTTCCTGTCGGAATACCCCTGTGCGCAATTTCTGGTCGAGCAGCAAAAGTAG | 4524 | 41.49 | MSLRKGSKVWVEDKDFAWVAAEVLDFVGKQVRVSTVTGKKVLALPEKLLPRDADEDDHGGVDDMTKLTYLNEPGVLYNLQRRYSLNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKGAPFGELSPHVFAVADASYRAMISEGRSQSILVSGESGAGKTETTKLIMQYLTFVGGRASGDNRTVEQQVLEVRVTVYQSNSILRFGKFVEIQFDTNGRISGAAIRTYLLERSRVVQITNPERNYHCFYQLCASGRDAEKYNLNHPSHFRYLNQSKTYELDGVSNAEEYIRTRRAMDIVGISHEDQEAIFRTLAAILHLGNVEFSPGKEHDSSVLKDEKSTFHLGVASNLLMCDSNLLVSALCTRSIQTREGIIVKALDCEGAVASRDALAKTVYARLFDWLVDKINRSVGQDLNSQFQIGLLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYSKEEINWSYIEFIDNQDVLDLIEKKPIGIIGLLDEACMFPRSTHETFSTKLFQNFRTHPRLERTKFSETDFTLSHYAGKVTYHTDTFLDKNRDYVVVEHCNLLASSKCNFVAGLFSSLPEESSRSSYKFSSVASRFKQQLQALMETLNSTEPHYVRCVKPNSLNRPQKFENLSILHQLRCGGVLEAVRISLAGYPTRRTYAEFIDRFGLLAPDLLDGSYDERLITEKILQKLKLKNFQLGRTKVFLRAGQIGILDARRAEVLDNAAKCIQRRLRTYHARRDFLLMRSTAIALQAYCRGCLARNFYVAKRESTAATTIQKYIRRWFFRNIYLEIYSAALTIQSSIRGFATRSRFLHDRRNKAAVLIQARWRTFKVRAVFHRHQASIIAIQCRWRQKLAKRELRRLKQEANEAGALRLAKNKLEKQLEDLTWRLHLEKRLRASNEEAKSNEILKLQKMLESLSLELDAAKLAAINECNKNAVLQNQMELLAKEKSAFEREIVAVVELKKENAFLKSALEAMEKRNSALEVKLVEAQKDGSHTVEKLQDVEQKCTKLQQNVKSLEEKLSVLEDENHVLRQKALSATPRSNRPNFVRALSEKSSVALVPNADRKTLFESPTPTKLVAPFSQGLSESRRTKLTVERHQENYEVLSRCIKENLGFKGGKPLAACIIYKCLLNWHAFESERTVIFDYIIEGINDALKAGDENITLPYWLSNASALLCLLQRNLKSNGFLSAASQRSTGSTGLASRISQGLKSPFKYIGFEDGISHLEARYPAILFKQQLTACVEKIFGLIRDNLKKELSPLLSSCIQAPKAARVHAGKSSRSPGVPQPSTSSPWDNIIKFLDSLMSRLRANHVPSFFIRKLITQVFSFINISLFNSLLLRRECCTFSNGEYVKSGLAELEKWIGNATEEYSGTSWHELNYIRQAVGFLVIHQKRKKSLEEIRQDLCPALTVRQIYRISTMYWDDKYGTQSVSNEVVAQMREILNKDNQNLTSNSFLLDDDLSIPFSTEDIDMALPLLEPSDIELPTFLSEYPCAQFLVEQQK | 1507 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 22370890 | 22416632 | - | CrPI670011_08g009220.1 | Cre08g0922 | 505840 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre08g0922 | 1507 | FunFam | Myosin heavy chain | 241 | 295 | - | - | |
| Cre08g0922 | 1507 | Pfam | DIL domain | 1326 | 1429 | IPR002710 | - | |
| Cre08g0922 | 1507 | CDD | MyosinXI_CBD | 1102 | 1473 | IPR037975 | GO:0007015(InterPro) | |
| Cre08g0922 | 1507 | Coils | Coil | 964 | 998 | - | - | |
| Cre08g0922 | 1507 | Gene3D | - | 241 | 298 | - | - | |
| Cre08g0922 | 1507 | Coils | Coil | 856 | 900 | - | - | |
| Cre08g0922 | 1507 | Coils | Coil | 912 | 932 | - | - | |
| Cre08g0922 | 1507 | ProSiteProfiles | IQ motif profile. | 747 | 776 | - | - | |
| Cre08g0922 | 1507 | Coils | Coil | 1006 | 1040 | - | - | |
| Cre08g0922 | 1507 | SMART | DIL_2 | 1325 | 1432 | IPR002710 | - | |
| Cre08g0922 | 1507 | SMART | MYSc_2a | 53 | 722 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cre08g0922 | 1507 | Gene3D | - | 655 | 722 | - | - | |
| Cre08g0922 | 1507 | PANTHER | MYOSIN | 818 | 1448 | - | GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER) | |
| Cre08g0922 | 1507 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 300 | 590 | - | - | |
| Cre08g0922 | 1507 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 4 | 53 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cre08g0922 | 1507 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 50 | 768 | IPR027417 | - | |
| Cre08g0922 | 1507 | Gene3D | - | 821 | 871 | - | - | |
| Cre08g0922 | 1507 | Gene3D | - | 723 | 773 | - | - | |
| Cre08g0922 | 1507 | Gene3D | - | 774 | 820 | - | - | |
| Cre08g0922 | 1507 | ProSiteProfiles | IQ motif profile. | 797 | 824 | - | - | |
| Cre08g0922 | 1507 | ProSiteProfiles | Dilute domain profile. | 1151 | 1450 | IPR002710 | - | |
| Cre08g0922 | 1507 | ProSiteProfiles | IQ motif profile. | 843 | 872 | - | - | |
| Cre08g0922 | 1507 | Gene3D | Kinesin motor domain | 62 | 651 | IPR036961 | - | |
| Cre08g0922 | 1507 | CDD | MYSc_Myo11 | 73 | 709 | IPR036018 | - | |
| Cre08g0922 | 1507 | SMART | iq_5 | 746 | 768 | IPR000048 | GO:0005515(InterPro) | |
| Cre08g0922 | 1507 | SMART | iq_5 | 819 | 841 | IPR000048 | GO:0005515(InterPro) | |
| Cre08g0922 | 1507 | SMART | iq_5 | 771 | 793 | IPR000048 | GO:0005515(InterPro) | |
| Cre08g0922 | 1507 | SMART | iq_5 | 794 | 816 | IPR000048 | GO:0005515(InterPro) | |
| Cre08g0922 | 1507 | SMART | iq_5 | 842 | 864 | IPR000048 | GO:0005515(InterPro) | |
| Cre08g0922 | 1507 | SMART | iq_5 | 723 | 745 | IPR000048 | GO:0005515(InterPro) | |
| Cre08g0922 | 1507 | Pfam | Myosin head (motor domain) | 61 | 709 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cre08g0922 | 1507 | ProSiteProfiles | Myosin motor domain profile. | 59 | 721 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cre08g0922 | 1507 | Gene3D | - | 427 | 612 | - | - | |
| Cre08g0922 | 1507 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 776 | 870 | IPR027417 | - | |
| Cre08g0922 | 1507 | Coils | Coil | 940 | 960 | - | - | |
| Cre08g0922 | 1507 | ProSiteProfiles | IQ motif profile. | 820 | 849 | - | - | |
| Cre08g0922 | 1507 | PRINTS | Myosin heavy chain signature | 146 | 171 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cre08g0922 | 1507 | PRINTS | Myosin heavy chain signature | 417 | 445 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cre08g0922 | 1507 | PRINTS | Myosin heavy chain signature | 185 | 212 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cre08g0922 | 1507 | PRINTS | Myosin heavy chain signature | 89 | 108 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cre08g0922 | 1507 | PRINTS | Myosin heavy chain signature | 470 | 498 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cre08g0922 | 1507 | Pfam | IQ calmodulin-binding motif | 775 | 792 | IPR000048 | GO:0005515(InterPro) | |
| Cre08g0922 | 1507 | Pfam | IQ calmodulin-binding motif | 797 | 815 | IPR000048 | GO:0005515(InterPro) | |
| Cre08g0922 | 1507 | Pfam | IQ calmodulin-binding motif | 726 | 744 | IPR000048 | GO:0005515(InterPro) | |
| Cre08g0922 | 1507 | Pfam | IQ calmodulin-binding motif | 751 | 764 | IPR000048 | GO:0005515(InterPro) | |
| Cre08g0922 | 1507 | Pfam | IQ calmodulin-binding motif | 822 | 840 | IPR000048 | GO:0005515(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre08g0922 | Cre-Chr8:22370890 | Cre09g0341 | Cre-Chr9:3326430 | 0.00E+00 | dispersed | |
| Cre08g0922 | Cre-Chr8:22370890 | Cre06g0901 | Cre-Chr6:2375693 | 0.00E+00 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre08g0922 | K10357 | - | csv:101210527 | 2851.23 |